In UV‐B Irradiated Rice High Levels of Mn Limits Chloroplasts Injury Triggered by Oxidative Stress

The molecular mechanism to control the oxidative burst exerted by Mn accumulation in rice (Oryza sativa L.) plants, grown in hydroponics containing 0.5, 2 and 8 mg l^–1 Mn and irradiated with a total biological effective UV‐B irradiation of 20.825 kJ m^?2, was investigated in the chloroplasts at the 15th and 21st days after germination. In both experimental periods, Mn accumulation kinetics in the leaves and in the chloroplast lamellae displayed overall increases. Coupled to higher membrane selectivity, superoxide production and acyl lipids peroxidation in the thylakoids decreased, prompting upper rates of the Hill and Mehler reactions. Connected to UV‐B irradiation, higher accumulated Mn in thylakoids was found to be chelated in a 36.5 kDa protein, with Mn/protein ratio of about 1 and high content of Gln, Asp, Glu, Leu and Gly, being its EPR spectrum characteristic of high‐spin Mn(II), in a S = 5/2 ground state. As this protein exhibited enzymatic catalysis of superoxide dismutation, it was concluded that, under UV‐B irradiation, the high internal tolerance of Oryza sativa L. to Mn during the vegetative growth also triggers the synthesis of a manganese protein that mimics superoxide dismutase functioning, therefore furnishing an additional intimate protection against oxidative stress.     

Analysis of rice blast resistance gene <Emphasis Type="Italic">Pi</Emphasis>-<Emphasis Type="Italic">z</Emphasis> in rice germplasm using pathogenicity assays and DNA markers

The Pi-z gene in rice confers resistance to a wide range of races of the rice blast fungus, Magnaporthe oryzae. The objective of this study was to characterize Pi-z in 111 rice germplasm accessions using DNA markers and pathogenicity assays. The existence of Pi-z in rice germplasm was detected by using four simple sequence repeat (SSR) markers (RM527, AP4791, AP5659-1, AP5659-5) closely linked to Pi-z, and was verified using pathogenicity assays with an avirulent strain (IE1k) and two virulent races (IB33 and IB49). Among 111 germplasm accessions evaluated, 73 were found to contain the Pi-z gene using both SSR markers and pathogenicity assays. The remaining 38 germplasm accessions were found to be inconsistent in their responses to the blast races IB33, IEIk and IB49 with expected SSR marker alleles, suggesting the presence of unexpected SSR alleles and additional R gene(s). These characterized germplasm can be used for genetic studies and marker-assisted breeding for improving blast resistance in rice.     

Assessing the Impacts of Time-to-Detection Distribution Assumptions on Detection Probability Estimation

Abundance estimates from animal point-count surveys require accurate estimates of detection probabilities. The standard model for estimating detection from removal-sampled point-count surveys assumes that organisms at a survey site are detected at a constant rate; however, this assumption can often lead to biased estimates. We consider a class of N-mixture models that allows for detection heterogeneity over time through a flexibly defined time-to-detection distribution (TTDD) and allows for fixed and random effects for both abundance and detection. Our model is thus a combination of survival time-to-event analysis with unknown-N, unknown-p abundance estimation. We specifically explore two-parameter families of TTDDs, e.g., gamma, that can additionally include a mixture component to model increased probability of detection in the initial observation period. Based on simulation analyses, we find that modeling a TTDD by using a two-parameter family is necessary when data have a chance of arising from a distribution of this nature. In addition, models with a mixture component can outperform non-mixture models even when the truth is non-mixture. Finally, we analyze an Ovenbird data set from the Chippewa National Forest using mixed effect models for both abundance and detection. We demonstrate that the effects of explanatory variables on abundance and detection are consistent across mixture TTDDs but that flexible TTDDs result in lower estimated probabilities of detection and therefore higher estimates of abundance.Supplementary materials accompanying this paper appear on-line.     

Identification of resistance gene analogue markers closely linked to wheat powdery mildew resistance gene Pm31

Specific oligonucleotide primers, designed for the sequences of known plant disease resistance genes, were used to amplify resistance gene analogues (RGAs) from wheat genomic DNA. This method was applied in a bulked segregant analysis to screen for the RGA markers linked to the powdery mildew resistance gene Pm31, introgressed into common wheat from wild emmer. Two RGA markers (RGA200 and RGA390) were found to be closely linked to Pm31 and completely co‐segregating with the marker allele of Xpsp3029 linked to Pm31, with a genetic distance of 0.6 cM. These two RGA markers were then integrated into the formerly established microsatellite map of Pm31 region. The result showed the effectiveness of the RGA approach for developing molecular markers linked to disease resistance genes and demonstrated the efficiency of denaturing polyacrylamide‐gel electrophoresis for detecting polymerase chain reaction polymorphism.     

Biochemical changes during the development of cork spot of apples

Biochemical changes occurring during the development of cork spot of York Imperial were investigated. At the first visible sign of the disorder, the rate of ethylene production increases in the affected tissue. Respiration also increases, acetate being the major respiratory substrate rather than glucose. Protein synthesis, pectin synthesis, and the movement of inorganic ions into the tissue follow. During the time the chemical changes are taking place in the tissue, abnormal cell division is initiated, packing the newly-formed cells into the intercellular spaces. At the final stage of development, the tissue becomes brown and appears as a firm brown spot in the flesh of the apple. Cork spot is somewhat different from bitter pit in that the spots appear early in the season, the affected tissue is deeper in the flesh, and firmer. The chemical changes discovered so far in both disorders, however, appear to be similar. We consider the abnormal chemical changes that occur in both disorders to be common to diseases and injuries and not specific for either cork spot or bitter pit.

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Zusammenfassung Die Untersuchungen erstreckten sich auf biochemische Veränderungen, die während der Entwicklung von cork spot bei Äpfeln der Sorte York Imperial auftreten. Beim ersten sichtbaren Anzeichen der Störung steigt die Rate der Äthylenbildung im befallenen Gewebe an. Auch die Atmung nimmt zu, wobei Acetat das grössere Atmungsprodukt darstellt als Glucose. Protein- und Pektin-Synthese sowie Bewegung anorganischer Ionen in das Gewebe folgen. Während der Zeit chemischer Veränderungen im Gewebe beginnt eine abnorme Zellteilung, indem die neugebildeten Zellen in die interzellularen Zwischenräume eingebaut werden. Im Endstadium der Entwicklung wird das Gewebe braun und erscheint als fester Fleck im Fleisch des Apfels. Cork spot unterscheidet sich etwas von der Stippigkeit dadurch, dass die Flecken früher in der Saison erscheinen, sich die befallenen Gewebe tiefer im Fleisch befinden und fester sind. Die chemischen Veränderungen beider Störungen scheinen sich — soweit sie bekannt sind — zu ähneln. Wir glauben, dass die chemischen Veränderungen, die bei beiden Störungen auftreten, allgemein für Krankheiten und Verletzungen zutreffen und nicht entweder für Stippigkeit oder cork spot spezifisch sind.

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Resume Quelques changements biochimiques se produisant pendant le développement du cork spot chez la York Imperial ont été étudiés.Au premier signe visible de désordre, la vitesse de production d'éthylène augmente dans le tissu atteint. La respiration augmente également; l'acétate devient le substrat principal de la respiration, plutôt que le glucose. Une synthèse de protéines, de pectine, ainsi que des déplacements d'ions inorganiques dans le tissu se produisent ensuite.Pendant que les changements biochimiques ont lieu, une division cellulaire anormale est initiée, et les cellules nouvellement formées s'accumulent dans les espaces intercellulaires.Au stade final de développement, le tissu devient brun et apparaît comme une tache brune et ferme, dans la chair de la pomme. Le cork spot diffère quelque peu du bitter pit par le fait que les taches apparaissent tôt dans la saison, le tissu malade étant localisé plus profondément dans la chair, et plus ferme. Les modifications chimiques trouvées dans les deux maladies paraissent cependant être similaires. Nous considérons ces changements chimiques comme propres aux maladies et blessures en général et comme non spécifiques, ni du cork spot, ni du bitter pit en particulier.

     

Influence of race and post infection temperature on two components of partial resistance to wheat leaf rust in seedlings of wheat

Summary Components of partial resistance, infection frequency and latency period, were determined in 71 winter and spring wheat genotypes in the seedling stage, after infection with three races of leaf rust (Felix 3B, Clement B and Betuwe 85C) at three different day/night temperature regimes (24/18°C, 18/12°C and 12/6°C). The genotypes were split into two groups and two separate experiments were carried out. Five genotypes, SVP 84039, Akabozu, Banco, BH 1146 and Orso, conferred a low infection frequency and a long latency period and Westphal 12A a long latency period, indicating a relatively high level of partial resistance. The correlation coefficient between infection frequency and latency period was low. Race-specificity was not found. There was a significant temperature effect on the latency period. In the second experiment the temperature x genotype interaction was significant. Temperature-response functions of transformed data demonstrated that the latency periods of four relatively resistant genotypes, Westphal 12A, Banco, BH 1146 and Orso and of Sarno and Mirela were most sensitive to temperature. The range between the genotypes with the longest and the shortest latency period was highest at 12°C. Therefore, low temperature regimes are preferred to distinguish differences in level of partial resistance.