Segregation analysis of blood oxygen saturation in broilers suggests a major gene influence on ascites

1. Blood oxygen saturation (SaO) is a potential indicator trait for resistance to ascites in chickens. 2. The objective of the study was to investigate the genetic architecture of SaO in a meat-type chicken line reared in commercial conditions. 3. Data were collected over 15 generations of selection and were divided into two data sets on the basis of a change in recording age from 6 to 5 weeks of age, approximately halfway through the period. The resulting pedigrees comprised in excess of 90,000 birds each and, on average, 12% of these birds had SaO records. 4. Segregation analyses of SaO were carried out assuming a mixed inheritance model that included a major locus segregating in a polygenic background. 5. The analyses suggest that a major gene is involved in the genetic control of SaO in this line. The putative gene acts in a dominant fashion and has an additive effect of around 0.90 sigma(p), equivalent to a predicted difference in SaO between the two homozygous classes of more than 10%. The frequency of the allele that increases SaO changed from 0.53 to 0.65 from the first to the second set of data, consistent with selection on SaO scores. 6. Using estimated genotype probabilities at the putative major locus, we inferred that it acts in an overdominant fashion on body weight and fleshing score. If the low SaO allele leads to susceptibility to ascites, its combined effects are consistent with it being maintained in the population by a balance of natural selection on fitness nad artificial selection on growth and carcase traits. 7. Even with selection on both SaO and growth traits, the combined genotypic effects would make it difficult to remove the unfavourable low-SaO allele by means of traditional selection without the use of genetic markers.     

Selection for growth rate or against back fat thickness in pigs is associated with changes in growth hormone axis plasma protein concentration and mRNA level.

Selection for increased growth rate or decreased back fat thickness results in concomitant changes in endocrine and metabolic status. Growth hormone (GH) changes in blood plasma concentration related to selection for growth rate and fat deposition were reported in pigs. The molecular mechanisms regulating selection-induced changes in GH plasma concentration remain largely unknown. We investigated selection-associated changes in GH axis parameters in 2 pig lines selected for increased growth rate (F-line), or decreased back fat thickness (L-line), respectively. First, we investigated selection-associated changes in GH pulse parameters. In both selection lines we found each generation a declining GH peak maximum concentration and area under the GH curve. GH pulse width was not associated with generation number. In both lines generation number was associated with a declined pulse interval, indicating that the number of pulses per day increased on average with 1 pulse per 24 h per generation. Second, plasma concentration of GH axis related Insulin-like growth factor-I (IGF-I) and insulin were investigated. Plasma IGF-I concentration was not associated with generation number in the F-line. Mean plasma insulin concentration declined each generation in both lines. Third, we investigated changes in GH and Pit-1 mRNA levels. In both selection lines GH and Pit-1 mRNA levels increased approximately 50% each generation. The high SD of the GH mRNA levels in both lines may suggest that the GH mRNA levels are pulsatile in vivo. We postulate a molecular mechanism that may explain how selection is associated with increased GH mRNA levels and GH pulse numbers, while lowering GH release per pulse.     

“Arte et Labore”—A Blackburn Rovers fan's legacy in human complex trait genetics

Through his own research contributions on the modelling and genetic analysis of quantitative traits and through his former students and postdocs, Robin Thompson has indirectly left a major legacy in human genetics. In this short note, we highlight examples of the long‐lasting relevance and impact of Robin's work in human genetics. A lone early study of marker‐assisted selection developed many of the tools and approaches later exploited (often after reinvention) by the human genetics community in GWAS studies and for prediction. Furthermore, a particularly clear example of the pervasive impact of Robin's work is that REML has become the default method to estimate variance components and that genetic predictions exploiting linkage disequilibrium in the population are starting to become used in precision medicine applications.     

Tracking the long-term decline and recovery of an isolated population

Effects of small population size and reduced genetic variation on the viability of wild animal populations remain controversial. During a 35-year study of a remnant population of greater prairie chickens, population size decreased from 2000 individuals in 1962 to fewer than 50 by 1994. Concurrently, both fitness, as measured by fertility and hatching rates of eggs, and genetic diversity declined significantly. Conservation measures initiated in 1992 with translocations of birds from large, genetically diverse populations restored egg viability. Thus, sufficient genetic resources appear to be critical for maintaining populations of greater prairie chickens.     

Temporal dynamics of forage succession for elk at two scales: Implications of forest management

Rapid conversion of lodgepole pine (Pinus contorta) dominated landscapes in western Alberta to a mosaic of successional stand ages has long-term implications for elk populations in the region that have not been fully assessed. We developed stand-level models of forage succession using data from 159 cutblocks to simulate forage and cover availability within the home range of an elk under “even-flow” and “pulsed” timber cutting scenarios that are common in this area. We found forage biomass peaked approximately 9 years following felling for both herbaceous (graminoids and forbs) and palatable browse forage. Forage production was determined primarily by the age of the cutblock (time since felling) and to a lesser extent elevation, compound topographic index (a measure of site wetness), and the distance to the nearest deciduous forest patch. Forbs became increasingly abundant as stands matured. Browse composition shifted from palatable species to unpalatable species after approximately 30 years. Within an elk home range (100 km²), we found that simulating an “even-flow” cutting regime resulted in forage availability that was always higher than under the current conditions of 90% forests when more than 10 ha were harvested per year. Further, forest cover (>30$>30$-year-old stands) was never less than the guideline of 60% of the area needed to provide adequate thermal and hiding cover. In contrast, when a “pulsed” harvest scenario was simulated, similar to what occurs for mountain pine beetle control, forage availability changed dramatically over time as a large cohort of harvested timber aged. Without further harvesting the stand conditions in the home range eventually returned to a state of pre-harvest risk for mountain pine beetle outbreak. We demonstrated several additional harvesting scenarios that avoided the potential risk and produced a much higher level of forage than currently exists.     

Effects of floor heating and litter quality on the development and severity of foot pad dermatitis in young turkeys

Actions concerning animal health in turkey production are coming more and more to the fore. Litter quality has a great impact on the bird's health and welfare. This study aimed at evaluating the effects of using floor heating, different litter materials, and exposure to litter with a "critical moisture content" of 35% for 16 or 24 hr/day on the severity of foot pad dermatitis (FPD), a widespread disease in fattening turkeys. Four groups of 2-wk-old female turkeys, with 20 birds in each, were reared during 3 wk. All turkeys were fed a commercial pellet diet ad libitum. The first two groups were kept on wood shavings (35% moisture) without and with floor heating. The other two groups were housed on lignocellulose (Soft Cell) of 35% moisture without and with floor heating. In each group, half of the birds were housed for 8 hr/day in adjacent separate boxes where the litter was kept clean and dry throughout the experimental period. Foot pads were assessed weekly for external and at day 35 for histopathologic scoring (scores: 0 = healthy; 7 = ulcer). At day 14 each bird had normal and healthy foot pads. The results indicate that using floor heating resulted in significantly lower FPD scores (0.8 +/- 0.2) compared to groups without floor heating (2.0 +/- 0.8). Using lignocellulose as a litter material resulted in significantly lower histopathologic FPD scores (1.4 +/- 0.7) compared with wood shavings (1.7 +/- 0.8). In all birds housed on dry litter for 8 hr/day, significantly lower FPD scores were found compared to birds housed on wet litter for 24 hr. In conclusion, using floor heating, even with wet litter (35% moisture), independent of the litter type, resulted in reduced severity of FPD compared to those birds housed in pens without using floor heating. Additionally, using lignocellulose as a litter material resulted in lower FPD compared with wood shavings. Keeping litter dry and "warm" could be achieved by using floor heating, which is considered a practical step to enhance animal health and welfare.     

Long‐term Effects of Pyrethrin and Cyfluthrin,a Type II Synthetic Pyrethroid,Insecticide Applications on Bull Reproductive Parameters

The objectives of this study were to determine effects of cyfluthrin and pyrethrin spray products, used in combination with cyfluthrin topical and ear tag applications, on bull reproductive parameters over 18 weeks. Angus or Angus x Simmental bulls were randomly assigned to one of three treatment groups: (i) no exposure to pyrethrins/cyfluthrin (CONT; n = 10), (ii) cyfluthrin ear tag and topical applications (ET; n = 10), or (iii) cyfluthrin ear tag, topical, premise spray and pyrethrin fog spray applications (ET+S; n = 8). Bull body weight was measured every 3 week, and body condition score and scrotal circumference were recorded on weeks 0, 9 and 18. Semen and serum were collected every 3 weeks for sperm evaluation and testosterone measurement, respectively. There was a treatment × week interaction (p < 0.01) for sperm with primary defects; bulls in CONT group had a greater (p = 0.01) percentage of sperm with primary defects than bulls treated with insecticides at week 18. Overall and progressive sperm motility, normal sperm morphology, secondary sperm defects and serum testosterone concentrations changed (p < 0.01) over time in all bulls; however, treatment did not affect (p ≥ 0.13) any of these parameters. There were also no treatment effects (p ≥ 0.08) on bull body weight, body condition score or scrotal circumference. The use of pyrethrin‐ and cyfluthrin‐based insecticides, regardless of application, did not negatively affect reproductive parameters in beef bulls when administered over 18 weeks.