Molecular mapping of greenbug (Schizaphis graminum) resistance gene Rsg1 in barley

The greenbug, Schizaphis graminum (Rondani) is an extremely damaging aphid pest of barley (Hordeum vulgare L.) particularly in the southern Great Plains of the USA. The simply inherited, dominant resistance gene Rsg1 is in all greenbug‐resistant US barley cultivars. In this study, we conducted molecular mapping of Rsg1 using an F_2:3 population derived from a cross between the greenbug‐resistant Post 90*4/R015 and susceptible CI2260 inbred lines. Segregation of host responses to greenbug biotype E infestation confirmed that a single dominant gene is responsible for greenbug resistance in Post 90*4/R015. Simple sequence repeat (SSR) markers evenly distributed along the seven barley chromosomes were employed for the construction of a framework genetic map. Linkage analysis placed the Rsg1 locus in the long arm of chromosome 3H (3HL) flanked by SSR markers Bmag0877 and GBM1420 that were 35 cM apart. Polymorphic single‐nucleotide polymorphism (SNP) markers in 3HL were identified from an Illumina GoldenGate SNP assay and used for targeted mapping to locate Rsg1 to an 8.4‐cM interval. Comparative analysis identified syntenic genomic regions in Brachypodium distachyon chromosome 2, in which 37 putative genes were annotated including a NB‐LRR‐type resistance gene homologue that may be a potential candidate gene for the Rsg1 locus of barley. Results from this study offer a starting point for fine mapping and cloning of this aphid resistance gene in barley.     

75 years of breeding pinto bean for resistance to diseases in the United States

Diseases are major production constraints of pinto bean despite 75 years of breeding. The objectives were to (1) assess progress made and (2) discuss future breeding strategies. Bean common mosaic virus (BCMV), anthracnose, rust, white mold, common blight, and halo blight and growth habit, seed weight, and seed coat darkening were evaluated for 52 cultivars released between 1944 and 2001. Sixteen cultivars were resistant to BCMV, 12 to race 53 of rust, five to race 73 of anthracnose, two to halo blight, and none to common blight and white mold. Four were resistant to two and none to three or more diseases. Four had Type I, ten Type II, and others Type III growth habit. Bill Z, Grand Mesa, Montrose, Olathe, Othello, Ouray and Pindak darkened slower in storage. Pintoba had the largest and Cahone smallest seed. An integrated breeding strategy is suggested for simultaneous improvement of resistance to multiple-diseases.     

Quantification of Bacillus thuringiensis Cry1Ab protein in tissues of YieldGard (MON810) corn hybrids tested at multiple field locations in India

Transgenically expressed Bacillus thuringiensis insecticidal-protein Cry1Ab was quantified in target tissues of insect feeding of several YieldGard^® corn hybrids. The Cry1Ab protein is intended to protect corn plants from two economically important stem borers, Chilo partellus and Sesamia inferens. A total of seven YieldGard hybrids, all with MON810 event, were field-tested in a total of fourteen locations during the dry season (October–March) of 2005/2006 and wet season (May–October) of 2006. S. inferens and C. partellus oviposit on leaves of young corn plants, 15–60 days after emergence (DAE). The neonates initially feed by scraping the leaf lamina before migrating to bore into the stem. Thus high concentrations of Cry1Ab in whorl leaf and stem tissues would ensure effective control of the borers. The mean tissue Cry1Ab concentrations during the oviposition window of the borers (15–60 DAE), ranged from 50.05 to 21.01 ppm in whorl leaf, and between 9.26 and 3.47 ppm in stem tissue during the same period in the dry season of 2005/06. Similarly, Cry1Ab concentrations in whorl leaf and stem between 15 and 60 DAE during the wet season of 2006 ranged between 19.30 to 11.08 and 14.28 to 4.69 ppm, respectively. The baseline-sensitivity data of these insects to Cry1Ab in laboratory assays was determined. The concentrations of Cry1Ab in the target tissues as studied in seven YieldGard hybrids tested suggest effective management of the two borers. This paper also provides a summary of the expression of the Cry1Ab gene in various genetic backgrounds.     

Evaluation of actinomycete isolates obtained from herbal vermicompost for the biological control of Fusarium wilt of chickpea

A total of 137 actinomycetes cultures, isolated from 25 different herbal vermicomposts, were characterized for their antagonistic potential against Fusarium oxysporum f. sp. ciceri (FOC) by dual-culture assay. Of the isolates, five most promising FOC antagonistic isolates (CAI-24, CAI-121, CAI-127, KAI-32 and KAI-90) were characterized for the production of siderophore, cellulase, protease, hydrocyanic acid (HCN), indole acetic acid (IAA) and antagonistic potential against Rhizoctonia bataticola, which causes dry root rot in chickpea (three strains viz. RB-6, RB-24 and RB-115) and sorghum (one strain). All of the five FOC antagonistic isolates produced siderophore and HCN, four of them (except KAI-90) produced IAA, KAI-32 and KAI-90 produced cellulase and CAI-24 and CAI-127 produced protease. In the dual-culture assay, three of the isolates, CAI-24, KAI-32 and KAI-90, also inhibited all three strains of R. bataticola in chickpea, while two of them (KAI-32 and KAI-90) inhibited the tested strain in sorghum. When the FOC antagonistic isolates were evaluated further for their antagonistic potential in the greenhouse and wilt-sick field conditions on chickpea, 45-76% and 4-19% reduction of disease incidence were observed, respectively compared to the control. The sequences of 16S rDNA gene of the isolates CAI-24, CAI-121, CAI-127, KAI-32 and KAI-90 were matched with Streptomyces tsusimaensis, Streptomyces caviscabies, Streptomyces setonii, Streptomyces africanus and an identified species of Streptomyces, respectively using the BLAST searching. This study indicated that the selected actinomycete isolates have the potential for biological control of Fusarium wilt disease in chickpea.     

Investigation of a community cluster of cutaneous Mycobacterium marinum infection,an emerging zoonotic pathogen in aquaculture industry,Haliburton, Kawartha,Pine Ridge District Health Unit,Ontario, Canada,July–August 2015

In July 2015, a cluster of five suspect cases of clinically diagnosed Mycobacterium marinum (M. marinum) skin infections were reported to the Haliburton, Kawartha, Pine Ridge District Health Unit (HKPRDHU), Ontario, Canada, with two additional cases subsequently identified through case finding. All seven cases presented with cutaneous lesions located on the finger, hand and/or elbow regions typical of M. marinum infection. Specimens were collected by skin biopsy for two of the seven cases; both cases tested positive for M. marinum by molecular detection (hsp65 gene amplification and sequencing), and one was confirmed positive for M. marinum by culture. All seven cases reported handling raw shrimp from an aquaculture facility in the Health Unit's jurisdiction. M. marinum is not a reportable disease in Ontario, and there are no known previous reports of a cluster of M. marinum reported in Ontario, Canada. A cluster investigation working group was struck that included representation from various agencies including Public Health Ontario (PHO), Public Health Ontario Laboratories (PHOL), Ontario Ministry of Agriculture and Rural Affairs (OMAFRA) and the two health units involved in case investigations. Several public health and aquaculture farming recommendations were made to mitigate further risks associated with handling of raw shrimp from the facility. Several challenges were faced during the investigation process. The paper discusses these challenges and public health recommendations made in order to mitigate occupational and public health risks related to the hazard identified.     

Physicochemical Properties and Functional Compounds of Commercial Green Tea Seed Oil

Physicochemical properties of green tea seed oil including cold test,color,flash point,gravity,refraction index,moisture content,acid value,iodine value,unsaponifiable matter and saponification value were investigated.Fatty acid composition and catechin content of the oil was determined by GC and HPLC analysis.The oil is stable at low temperature.High flash point （267.8 ± 5.1 ℃） showed the high thermal stability of green tea seed oil as well,which support for suitability to use as cooking oil.Specific gravity and refraction index of green tea seed oil was found as 0.913 and 1.4679,respectively.Color of the oil was measured as 99.7 ±0.2 for lightness,1.9 ± 0.1 for greenness and 6.6 ± 0.1 for yellowness.Acid value （KOH mg/ml）,iodine value,unsaponifiable matter （％） and saponification value of green tea seed oil were 0.21,104.1,0.11 and 215,respectively.Fatty acids compositions of green tea seed oil was found to be dominated by oleic acid （81.3％） and presence of minor amount of linoleic acid （4.8％）,palmitic acid （4.6％）,palmitoleic acid （3.3％）,linolenic acid （3.2％） and stearic acid （1.0％）.The presence of antioxidative compounds such as （-）-epicatechingallate （207.2 ±0.2 g/g） and （-）-epigallocatechin gallate （99.5 ±0.6 g/g） in the oil could enhance its shelf life during storage.     

Cytoarchitectonic study of the brain of a dwarf snakehead, Channa gachua (Ham.). I. The telencephalon

Cytoarchitectonic pattern of the telencephalon of a dwarf snakehead, Channa gachua, is studied by serial transverse sections of the brain (Kluver and Barrera staining). On the anteriormost extremity of the telencephalon, olfactory bulbs terminate that are sessile. The olfactory bulbs comprise four concentric layers, which from outside toward the center are olfactory nerve layer, a glomerular layer, mitral cell layer, and internal cell layer. Large terminal nerve ganglion cells are prominently visible in the dorsomedial position where the bulbs terminate on the telencephalon. In all, 24 nuclei are identified in the telencephalon on ventral and dorsal areas and are named according to their position. Ventral telencephalon exhibits 11 nuclei. On the dorsal telencephalon, there are 13 nuclei. These again are named according to their position on dorsal, ventral, median, lateral, or posterior part. This study reported for the first time in this fish will be useful in tracing the neuronal system of Channa gachua and subsequent studies of the functional aspects of these nuclei in the regulation of reproductive cycle of this species.     

Effect of Phosphatidylcholine and Beta-Carotene Supplementation on Growth and Immune Response of Nile Tilapia,Oreochromis niloticus,in Cool Water

The effects of nutraceuticals in improving growth and immune response of Nile tilapia in cool water were investigated. Fish were reared in two different environments: warm water (28°C) and cool water (16°C). Fish reared in warm water (control) were provided with a basal commercial diet, while fish reared in cool water were provided with either the basal commercial diet (cool water control) or diets supplemented with nutraceuticals (either phosphatidylcholine or β-carotene). Experiments were conducted over an 8-week period. Fish held in warm water had significantly higher growth (p < 0.05), but condition factor, blood hematocrit, plasma glucose, and phagocytic capacity of macrophage cells were similar to fish held in cool water. Within the cool water groups (basal vs. supplemented diet), fish did not show any significant difference in condition factor, blood hematocrit, and phagocytic capacity of macrophage cells. Furthermore, there were no significant differences in glucose levels until the eighth week. Collectively these data indicate that a nutraceutical supplementation to the basal diet was not significantly beneficial. Despite slower growth, fish reared in cool water remained generally healthy. The observation that phagocytic capacity of macrophage cells was not significantly different suggests that disease resistance of tilapia grown in cool water may be comparable to those reared in warm water. Thus, our experiments suggest the feasibility of stocking or rearing tilapia in water temperatures as low as 16°C during cool weather, without need for supplementation to basal commercial feed.     

The Validation of Effect of Neutraceuticals on Growth and Immune Response of Nile Tilapia in Cool Water Using a Cluster-Based Approach

This interdisciplinary study investigated computational analytic methods used for biological hypothesis testing and applied the methods for the validation of the effects of nutraceuticals on growth and immune response of Nile tilapia in cool water. Farmers in cooler regions face problems with cultivating tilapia, one of the most popular cultivated fish species, due to poor survival rates at suboptimal temperatures. We hypothesized that two nutraceuticals, phosphatidylcholine and β-carotene, help tilapia adapt to cooler water temperatures and benefit tilapia's growth and immune response. Fish were reared in two different environments: warm water (28°C) and cool water (16°C). Fish reared in warm water (control) were provided with a basal commercial diet, while fish reared in cool water were provided with either the basal commercial diet (cool water control) or diets supplemented with nutraceuticals (either phosphatidylcholine or β-carotene). Experiments were conducted over an eight-week period. The effects of the nutraceuticals were tested using an unsupervised learning technique in data mining and statistics called cluster analysis. An external index used for cluster validation was adopted for testing our hypothesis by formulating the level of agreement between two different partitions of samples: experimental groups and clusters based on the similarity of their features. Contrary to the findings of previous studies, which showed the beneficial effects of phosphatidylcholine and β-carotene supplementation in a range of fish including tilapias, our test results show no significant difference among the fish reared in cool water and fed with either the basal diet or diets supplemented with the nutraceutical. Despite slower growth compared with fish held in warm waters, our study suggests the feasibility of stocking or rearing tilapia in water temperatures as low as 16°C during cool weather, without need for supplementation to basal commercial feed.