Morphological changes,peptidase activity,and effects of exogenous enzymes in the early ontogeny of Nile tilapia,Oreochromis niloticus

Aquaculture International - During the early ontogeny, the transition from endogenous (yolk protein) to exogenous feeding (artificial diets) represents a critical period linked to the...     

Nitrogen fixation by nodulated soybean under tropical field conditions estimated by the 15N isotope dilution technique

The contribution of biological N₂ fixation to the N nutrition of nodulated soybean was estimated using the ¹⁵N isotope dilution technique and a non-nodulating soybean isoline as a non-fixing control plant. The plants were grown in the field in concrete cylinders (60 cm dia) and harvested at seven stages of plant growth. Labelled N was added to the soil either as labelled organic matter before planting or in seven small additions (2kg N ha^?1) of (NH₄)₂SO₄ during the growing period.There was good agreement between isotope dilution estimates of nitrogen fixation for the two labelling methods. Acetylene reduction assays on intact root systems greatly underestimated N₂ fixing activity. The difference in total N between nodulated and non-nodulated plants generally gave higher estimates compared with the isotope technique. The data indicate that this was because nodulated plants recovered more N from the soil than the non-nodulated plants. After 92 days of growth, the soybean derived approximately 250kg N ha^?1 from biological N₂ fixation.     

The 15N-isotope dilution technique applied to the estimation of biological nitrogen fixation associated with Paspalum notatum cv. batatais in the field

The contribution of associated biological nitrogen fixation to the nitrogen nutrition of Paspaulum notatum cv. batatais was estimated using the ¹⁵N-isotope dilution technique. The plants were grown in the field in concrete cylinders (60 cm dia) filled with soil, to which were added small quantities of ¹⁵N-labelled fertilizer at frequent intervals over 12 months. The pensacola cultivar of P. notatum was used as a non-N₂-fixing control plant. This was justified by the observation that nitrogenase (intact core C₂H₂ reduction) activity associated with the pensacola cultivar was consistently much lower than that of the batatais cultivar.At the first harvest, no evidence for N₂ fixation associated with the batatais cultivar was obtained, probably because of slow establishment of the N₂-fixing association. However, at the subsequent three harvests the batatais cultivar exhibited a lower ¹⁵N-enrichment and yielded more N than the pensacola cultivar. These data together suggested that 8–25% of the N in the batatais cultivar originated from N₂ fixation.The grass Paspalum maritimum was also included in the experiment and exhibited low nitrogenase activity similar to that of the pensacola cultivar of P. notatum. However, the total N and ¹⁵N data of these two grasses were not in good agreement indicating that it is important for the use of the isotope dilution technique that control plants are of very similar physiology and growth habit.     

Impact of anthropogenic activity on the Hg concentrations in the Piracicaba river basin (São Paulo State, Brazil)

A sampling and analysis program has been completed between 1995 and 1998 in order to determine mercury concentrations in water, sediments, soils and fish in the Piracicaba river basin, one of the most populated and industrialized regions in Brazil. In sediment, the average Hg concentrations varied between 33 ± 17 ng g^?1 and 106 ± 78 ng g^?1, in samples collected during the rainy and dry season, respectively. The same averages were also found for soil samples (35 ± 14 and 109 ± 61 ng g^?1). In water, the total Hg concentration varied between < 1.1 and 24.0 ng L^?1. In piscivore fish, up to 943 μ g Hg kg^?1 was found. Our results show that all compartments undergo Hg contamination, in view of the levels found in pristine environments. Water contamination seems to be due mainly to diffuse processes of soil erosion and suspension of river bed sediment during the rainy season. Also untreated wastewaters generated by industrial activities and from domestic sewage appear to be potential non-point sources in the most industrialized and populated part of the basin. On the other hand, atmospheric transport of mercury originating from the Campinas Metropolitan Region could be another source of mercury contamination, especially in the basin headwaters.     

Molecular characterization of Mycoplasma gallisepticum isolates from Jordan

Two groups of Mycoplasma gallisepticum (MG) isolates (n = 24) from Jordan were analyzed by molecular methods and compared with other Middle Eastern isolates, related international isolates, and reference strains. The first group (n = 19) was isolated from July 2004 to January 2005 (isolation period A), and the newer group (n = 5) from June 2007 to April 2008 (isolation period B). The groups of isolates are from chicken flocks from northern Jordan, but are not from the same farms. None of the flocks were vaccinated for MG. Random amplified polymorphic DNA analysis, targeted sequencing of the partial MG cytadhesin 2 (mgc2), and the MG 16S-23S rRNA intergenic spacer region (IGSR) divided the Jordanian isolates into two groups. All of the 19 isolates from time period A, in addition to two isolates from time period B, were indistinguishable from the F strain. Three of five isolates from time period B were characterized as wild types and were indistinguishable from each other. The wild-type field strain was readily distinguished from the F strain. It was 91% and 96.4% similar to the F strain based on Clustal-W alignments of sequences of mgc2 and IGSR, respectively. Sequence similarity of mgc2 gene of the Jordan wild-type strain to isolates from Israel and Egypt ranged from 96.5% to 100%, whereas for IGSR it was 99.4%-100%. We theorize that the F-strain live MG vaccine, commonly used in Jordan prior to 2007, was transmitted to nonvaccinated poultry in the region and was a predominant genotype during time period A.     

Buffalo hepcidin: characterization of cDNA and study of antimicrobial property

Hepcidin, a novel gene encoded, 25 residue, 2–3 KDa cysteine rich cationic peptide synthesized in liver cells play an important role in iron metabolism in addition to its antimicrobial activity. In this study hepcidin cDNA expressed on hepatocytes of Bubalus bubalis has been characterized and the antibacterial activity of buffalo hepcidin analog has been determined. The complete buffalo hepcidin sequence is of 324 bp and have an ORF of 249 nucleotides from 14 to 262. The sequence analysis at nucleotide level showed homology of 98.0% with cattle, 84.3% with pig, whereas with human, chimpanzee and gorilla 80.3%, 80.7% and 81.5% respectively. The percent identity of buffalo hepcidin cDNA to that of japanese macaque, dog, gibbon, mouse and norway rat are81.9%, 79.9%, 79.9%, 67.9% and 65.9% respectively. The hepcidin cDNA of buffalo and cattle showed a total difference of five nucleotides at position 15, 108, 225, 240 and 246 with no difference in deduced amino acid sequence. The base A¹⁵, C¹⁰⁸, A²²⁵, C²⁴⁰, A²⁴⁶ in cattle are replaced by G¹⁵, G¹⁰⁸, G²²⁵, T²⁴⁰ and G²⁴⁶ respectively in buffalo. The deduced amino acid sequence of buffalo preprohepcidin consists of 82 amino acids containing 10 strongly basic, 3 strongly acidic, 27 hydrophobic and 29 polar amino acids. The predicted molecular weight and isoelectric point (P^I) for the peptide is 8883.67 Daltons and 8.804 respectively. Phylogenetic analysis both at nucleotide and amino acid level indicate that buffalo and cattle hepcidin sequences comprises one clad which is more closely related to pig compared to human. The chemically synthesized analog of buffalo hepcidin using Fmoc chemistry in solid phase had antibacterial activity.     

Determination of microbial phenolic acids in human faeces by UPLC-ESI-TQ MS

The aim of the present work was to develop a reproducible, sensitive, and rapid UPLC-ESI-TQ MS analytical method for determination of microbial phenolic acids and other related compounds in faeces. A total of 47 phenolic compounds including hydroxyphenylpropionic, hydroxyphenylacetic, hydroxycinnamic, hydroxybenzoic, and hydroxymandelic acids and simple phenols were considered. To prepare an optimum pool standard solution, analytes were classified in 5 different groups with different starting concentrations according to their MS response. The developed UPLC method allowed a high resolution of the pool standard solution within an 18 min injection run time. The LOD of phenolic compounds ranged from 0.001 to 0.107 μg/mL and LOQ from 0.003 to 0.233 μg/mL. The method precision met acceptance criteria (<15% RSD) for all analytes, and accuracy was >80%. The method was applied to faecal samples collected before and after the intake of a flavan-3-ol supplement by a healthy volunteer. Both external and internal calibration methods were considered for quantification purposes, using 4-hydroxybenzoic-2,3,4,5-d4 acid as internal standard. For most analytes and samples, the level of microbial phenolic acids did not differ by using one or another calibration method. The results revealed an increase in protocatechuic, syringic, benzoic, p-coumaric, phenylpropionic, 3-hydroxyphenylacetic, and 3-hydroxyphenylpropionic acids, although differences due to the intake were only significant for the latter compound. In conclusion, the UPLC-DAD-ESI-TQ MS method developed is suitable for targeted analysis of microbial-derived phenolic metabolites in faecal samples from human intervention or in vitro fermentation studies, which requires high sensitivity and throughput.     

Multivariate Statistical and GIS-Based Approach for the Identification of Mn and Ni Concentrations and Spatial Variability in Soils of a Humid Mediterranean Environment: La Rioja, Spain

Limnologists have regarded temporal coherence (synchrony) as a powerful tool for identifying the relative importance of local-scale regulators and regional climatic drivers on lake ecosystems. Limnological studies on Asian reservoirs have emphasized that climate and hydrology under the influences of monsoon are dominant factors regulating seasonal patterns of lake trophic status; yet, little is known of synchrony or asynchrony of trophic status in the single reservoir ecosystem. Based on monthly monitoring data of chlorophyll a, transparency, nutrients, and nonvolatile suspended solids (NVSS) during 1-year period, the present study evaluated temporal coherence to test whether local-scale regulators disturb the seasonal dynamics of trophic state indices (TSI) in a giant dendritic reservoir, China (Three Gorges Reservoir, TGR). Reservoir-wide coherences for TSI_CHL, TSI_SD, and TSI_TP showed dramatic variations over spatial scale, indicating temporal asynchrony of trophic status. Following the concept of TSI differences, algal productivity in the mainstream of TGR and Xiangxi Bay except the upstream of the bay were always limited by nonalgal turbidity (TSI_CHL?TSI_SD <0) rather than nitrogen and phosphorus (TSI_CHL?TSI_TN <0 and TSI_CHL?TSI_TP <0). The coherence analysis for TSI differences showed that local processes of Xiangxi Bay were the main responsible for local asynchrony of nonalgal turbidity limitation levels. Regression analysis further proved that local temporal asynchrony for TSI_SD and nonalgal turbidity limitation levels were regulated by local dynamics of NVSS, rather than geographical distance. The implications of the present study are to emphasize that the results of trophic status obtained from a single environment (reservoir mainstream) cannot be extrapolated to other environments (tributary bay) in a way that would allow its use as a sentinel site.     

Effects of habitat fragmentation on pollen flow and genetic diversity of the endangered tropical tree Swietenia humilis (Meliaceae)

Fragmentation of tropical forest represents a major threat to some tree populations by reducing local population size and gene flow from other populations. Both processes can decrease outcrossing rates and genetic variation in remnant stands. Despite these risks, some tree species have pollen vectors that mitigate these negative consequences for fragmented populations. In this paper, we assess both pollen flow and diversity of pollen sources in continuous forest and isolated stands of Swietenia humilis, a tropical tree species pollinated by small insects. Using seven nuclear microsatellite markers, we test the hypothesis that genetic diversity and the number of pollen donors are lower in remnant populations. Results show that allelic richness of seeds is lower in isolated populations (6.1 vs. 8.3 alleles per locus), even though adult populations do not show this difference.Pollen pool structure is greater in isolated patches (Φ_Iso = 0.26) than in continuous forest (Φ_For = 0.14), which yields estimates of the average effective number of pollen donors (N_ep) of 1.9 and 3.6 respectively. In addition, estimates of number of sires per mother indicate that isolated trees have half the number of pollen sources (4.98) than trees in the forest (9.8). Although extensive pollen movement (>2000 m) was recorded on both habitat conditions, indicating that fragmented patches are not isolated from pollen-mediated gene flow, this extensive pollen flow among trees in fragmented landscapes may not serve to counteract deleterious reproductive and genetic consequences of habitat fragmentation.