Optimal definition of contemporary groups for crossbred pigs in a joint purebred and crossbred genetic evaluation

In the pig industry, purebred animals are raised in nucleus herds and selected to produce crossbred progeny to perform in commercial environments. Crossbred and purebred performances are different, correlated traits. All purebreds in a pen have their performance assessed together at the end of a performance test. However, only selected crossbreds are removed (based on visual inspection) and measured at different times creating many small contemporary groups (CGs). This may reduce estimated breeding value (EBV) prediction accuracies. Considering this sequential recording of crossbreds, the objective was to investigate the impact of different CG definitions on genetic parameters and EBV prediction accuracy for crossbred traits. Growth rate (G_P) and ultrasound backfat (BF_P) records were available for purebreds. Lifetime growth (G_X) and backfat (BF_X) were recorded on crossbreds. Different CGs were tested: CG_all included farm, sex, birth year, and birth week; CG_week added slaughter week; and CG_day used slaughter day instead of week. Data of 124,709 crossbreds were used. The purebred phenotypes (62,274 animals) included three generations of purebred ancestors of these crossbreds and their CG mates. Variance components for four-trait models with different CG definitions were estimated with average information restricted maximum likelihood. Purebred traits’ variance components remained stable across CG definitions and varied slightly for BF_X. Additive genetic variances (and heritabilities) for G_X fluctuated more: 812 ± 36 (0.28 ± 0.01), 257 ± 15 (0.17 ± 0.01), and 204 ± 13 (0.15 ± 0.01) for CG_all, CG_week, and CG_day, respectively. Age at slaughter (AAS) and hot carcass weight (HCW) adjusted for age were investigated as alternatives for G_X. Both have potential for selection but lower heritabilities compared with G_X: 0.21 ± 0.01 (0.18 ± 0.01), 0.16 ± 0.02 (0.16 + 0.01), and 0.10 ± 0.01 (0.14 ± 0.01) for AAS (HCW) using CG_all, CG_week, and CG_day, respectively. The predictive ability, linear regression (LR) accuracy, bias, and dispersion of crossbred traits in crossbreds favored CG_day, but correlations with unadjusted phenotypes favored CG_all. In purebreds, CG_all showed the best LR accuracy, while showing small relative differences in bias and dispersion. Different CG scenarios showed no relevant impact on BF_X EBV. This study shows that different CG definitions may affect evaluation stability and animal ranking. Results suggest that ignoring slaughter dates in CG is more appropriate for estimating crossbred trait EBV for purebred animals.     

Influence of temperature and ontogeny on the levels of glucosinolates in broccoli (Brassica oleracea Var. italica) sprouts and their effect on the induction of mammalian phase 2 enzymes

Broccoli inflorescences have been recognized as components of healthy diets on the basis of their high content of fiber, vitamin C, carotenoids, and glucosinolates/isothiocyanates. Broccoli sprouts have been recently shown to have high levels of glucoraphanin (4-methylsulfinylbutyl glucosinolate), the precursor of the chemoprotective isothiocyanate, sulforaphane. This study evaluated the effects of temperature and developmental stage on the glucosinolate content of broccoli sprouts. Seedlings cultivated using a 30/15 degrees C (day/night) temperature regime had significantly higher glucosinolate levels (measured at six consecutive days postemergence) than did sprouts cultivated at lower temperatures (22/15 and 18/12 degrees C; p < 0.001). Both higher (33.1 degrees C) and lower (11.3 degrees C) constant temperatures induced higher glucosinolate levels in sprouts grown to a uniform size. Glucosinolate levels were highest in cotyledons and lowest in roots of sprouts dissected both early and late in the 11 day developmental span investigated. Nongerminated seeds have the highest glucosinolate levels and concordantly greater induction of mammalian phase 2 detoxication enzymes. Levels decline as sprouts germinate and develop, with consistently higher glucosinolate content in younger developmental stages, independent of the temperature regime. Temperature stress or its associated developmental anomalies induce higher glucosinolate levels, specific elevations in glucoraphanin content, and parallel induction of phase 2 chemoprotective enzymes.     

Ergot alkaloids reduce circulating serotonin in the bovine

Ergot alkaloids can interact with several serotonin (5-hydroxytryptamine [5-HT]) receptors provoking many physiological responses. However, it is unknown whether ergot alkaloid consumption influences 5-HT or its metabolites. Thus, two experiments were performed to evaluate the effect of ergot alkaloid feeding on 5-HT metabolism. In exp. 1, 12 Holstein steers (260 ± 3 kg body weight [BW]) were used in a completely randomized design. The treatments were the dietary concentration of ergovaline: 0, 0.862, and 1.282 mg/kg of diet. The steers were fed ad libitum, kept in light and temperature cycles mimicking the summer, and had blood sampled before and 15 d after receiving the treatments. The consumption of ergot alkaloids provoked a linear decrease (P = 0.004) in serum 5-HT. However, serum 5-hydroxytryptophan and 5-hydroxyindoleacetic acid did not change (P > 0.05) between treatments. In exp. 2, four ruminally cannulated Holstein steers (318 ± 3 kg BW) were used in a 4 × 4 Latin square design to examine the difference between seed sources on 5-HT metabolism. Treatments were: control—tall fescue seeds free of ergovaline, KY 32 seeds (L42-16-2K32); 5Way—endophyte-infected seeds, 5 way (L152-11-1739); KY31—endophyte-infected seeds, KY 31 (M164-16-SOS); and Millennium—endophyte-infected seeds, 3rd Millennium (L108-11-76). The endophyte-infected seed treatments were all adjusted to provide an ergovaline dosage of 15 μg/kg BW. The basal diet provided 1.5-fold the net energy requirement for maintenance. The seed treatments were dosed directly into the rumen before feeding. The experiment lasted 84 d and was divided into four periods. In each period, the steers received seeds for 7 d followed by a 14-d washout. Blood samples were collected on day 0 (baseline) and day 7 for evaluating the treatment response in each period. A 24 h urine collection was performed on day 7. Similar to exp. 1, serum 5-HT decreased (P = 0.008) with the consumption of all endophyte-infected seed treatments. However, there was no difference (P > 0.05) between the infected seeds. The urinary excretion of 5-hydroxyindoleacetic acid in the urine was not affected (P > 0.05) by the presence of ergot alkaloids. In conclusion, the consumption of ergot alkaloids decreases serum 5-HT with no difference between the source of endophyte-infected seeds in the bovine.     

Soil mapping for precision agriculture using support vector machines combined with inverse distance weighting

Precision Agriculture - Kriging has been shown to be the best interpolator to interpolate maps in precision agriculture. However, Kriging requires a high number of sampling points to generate...     

Growth performance and body composition of white seabream (Diplodus sargus) juveniles fed diets with different protein and lipid levels

An 83‐day feeding trial was carried out to determine the effect of different dietary protein and lipid levels on the growth performances and carcass composition of white seabream. Juveniles (10.7±0.2 g) were fed to satiation on four diets, varying in protein (15% and 28%) and lipid (12% and 16%) levels. The best growth performance was observed in fish fed on diets with higher protein level. Dietary lipids did not affect growth performance. Voluntary feed intake decreased with a increasing dietary protein level at both dietary lipid levels. Feed conversion ratio improved with the increase in dietary protein and lipid levels. Carcass composition remained unaltered by dietary protein levels (P>0.05). Carcass protein content tended to decrease, while lipid content tended to increase in groups fed on 16% lipid, compared with the 12% lipid groups. Additionally, protein retention was higher in fish fed on low‐protein and low‐lipid levels, compared with the high‐protein and high‐lipid group (29% vs. 19%). Lipid retention increased significantly with dietary protein level (P<0.001). Energy retention improved with dietary protein, but was not affected by dietary lipid levels. On the basis of our results, feeding white seabream on 15% dietary protein had a negative effect on growth and feed utilization. Dietary lipid did not induce a protein‐sparing action in Diplodus sargus juveniles.     

Application of Fuzzy Logic to Qualify the Environmental Impact in Abandoned Mining Sites

This work deals with the topic of qualification and prioritization of environmental impact in abandoned mining sites using fuzzy logic. It aims to classify old mining sites and describe their environmental impact through a numeric index. This is variable in the interval [0,1], and was named as index of environmental impact (I _EI). Its determination was made through a fuzzy inference system that allows the integration of several characterization components. The system was supported by data obtained in five sites in NW Portugal, which is a paradigmatic region regarding the variety of typical environmental problems provoked by old metallic mines. These sites may be considered environmental patterns as they represent such regional diversity. In a general way, the I _EI can be applied to other sites where the existence of abandoned mining structures generates environmental impact.     

Last occurrence and survival during winter of the arbovirus vector Culicoides brevitarsis at the southern limits of its distribution

SUMMARY: Linear regression analysis was used to describe the decline in numbers of Culicoides brevitarsis Kieffer into winter with monthly maximum, average and minimum temperatures at the southern limits to its distribution in New South Wales. From this, low temperature thresholds were derived when C brevitarsis would be absent from the field. The low minimum threshold ± 2 SE (95% Confidence Interval) of 8.1 ± 0.3°C was used with historical temperature data to estimate the last month that the species should occur (March to June) and the mean number of months (2 to 6.5) below the threshold at 17 selected sites. Probability for survival during winter at these sites was estimated from years when the number of consecutive months below the threshold was ≤ 2 months. This varied from zero to 51% depending on the location of the site. Last occurrence was 0.7 months later on average and absolute probabilities for survival ranged from zero to 100% when the temperatures were increased by an arbitrary 2°C.     

Genetic associations between temperament and performance traits in Nellore beef cattle

The aim of this study was to estimate genetic associations between temperament and performance traits. Temperament was evaluated in yearling male and female Nellore cattle, using four traits: temperament score (TS), for assessing animals’ reactions in a corral pen (n = 25 691); movement score (MOV), for animals’ movements recorded inside the crush; crush score (CS), for animal's general reactivity inside the crush; and flight speed (FS), for the speed (in m/s) at which the animals exited the crush (n = 11 697, for the last three methods); for all the temperament traits, lower scores indicate animals with calmer temperament. Performance traits were visual scores for conformation (C), finishing precocity (P) and muscling (M) evaluated at yearlings, and average daily gain (ADG) was estimated from weaning to yearling. Bayesian inference using Gibbs sampling was applied to estimate (co)variance components and genetic and phenotypic parameters. Heritability estimates for the temperament traits ranged from 0.07 (CS) to 0.28 (FS). Genetic correlations of the temperament traits with ADG and C, P and M were negative and ranged from −0.02 to −0.31. Phenotypic correlations were negative and consistently lower than the genetic, ranging from −0.08 to −0.02. It was concluded that the temperament traits assessed had favourable genetic correlation estimates with the performance traits studied. However, indirect responses in temperament when selecting for higher ADG and visual scoring system of C, P and M, will be low.