Dipstick test for DNA-based food authentication. Application to coffee authenticity assessment

This paper reports DNA-based food authenticity assays, in which species identification is accomplished by the naked eye without the need of specialized instruments. Strongly colored nanoparticles (gold nanoparticles) are employed as reporters that enable visual detection. Furthermore, detection is performed in a low-cost, disposable, dipstick-type device that incorporates the required reagents in dry form, thereby avoiding multiple pipetting and incubation steps. Due to its simplicity, the method does not require highly qualified personnel. The procedure comprises the following steps: (i) PCR amplification of the DNA segment that flanks the unique SNP (species marker); (ii) a 15 min extension reaction in which DNA polymerase extends an allele-specific primer only if it is perfectly complementary with the target sequence; (iii) detection of the products of the extension reaction within a few minutes by the naked eye employing the dipstick. No purification is required prior to application of the extension products to the dipstick. The method is general and requires only a unique DNA sequence for species discrimination. The only instrument needed is a conventional thermocycler for PCR, which is common equipment in every DNA laboratory. As a model, the method was applied to the discrimination of Coffea robusta and arabica species in coffee authenticity assessment. As low as 5% of Robusta coffee can be detected in the presence of Arabica coffee.     

Nitrogen Leaching Of Spring Wheat Genotypes (Triticum Aestivum L.) Varying In Nitrogen-Related Traits

Efficient use of nitrogen (N) by wheat crop and hence prevention of possible contamination of ground and surface waters by nitrates has aroused environmental concerns. The present study was conducted in drainage lysimeters for three years (1998–2000) to identify whether spring wheat genotypes (Triticum aestivum L.) that differ in N-related traits differ in N leaching and to relate parameters of N use efficiency (NUE) with parameters of N leaching. For this reason two spring wheat cultivars (‘Albis’ and ‘Toronit’) and an experimental line (‘L94491’) were grown under low (20 kg N ha^?1) and ample N supply (270 kg N ha^?1). The genotypes varied in parameters of NUE but not in N leaching. Grain yield of the high-protein line (‘L94491’) was, on average, 11% lower than that of ‘Toronit’ but among genotypes had significantly higher N in the grain (%), grain N yield, and N harvest index. Nitrogen lost through leaching was considerably low (0.42–0.52 g m^?2) mainly due to low volume of percolating water or the ability of the genotypes to efficiently exploit soil mineral N. There were no clear relationships between N-related genotype traits and N leaching, but across all treatments significantly negative correlations between volume of leachate and the amount of N in the total biomass and grain N yield existed.     

Decrease of heat shock protein levels and cell populations by wine phenolic extracts

The effect of red and white wine total extracts and phenolic fractions on heat shock protein (Hsp) levels in tumor cells and on tumor and endothelial cell populations in vitro has been investigated. Total extracts of red wines decreased Hsp70 and Hsp27 levels and the numbers of tumor and endothelial cells. Several red and white wine fractions significantly decreased Hsp27 levels, and some of them had also an effect on Hsp70 levels. A red wine fraction rich in polymeric flavanols and a white wine one rich in phenolic acids, flavonols, and tyrosol strongly lowered Hsp27 levels. Some red and white wine fractions strongly reduced tumor cell numbers, whereas most of them decreased endothelial cell numbers to variable extents. The present results indicate that wine phenolics decrease Hsp levels in tumor cells and tumor and endothelial cell populations. These properties may be important in the potent anticarcinogenic action of wine phenolics.     

Methanolic extract of Verbascum macrurum as a source of natural preservatives against oxidative rancidity

The antioxidant properties of various fractions of a methanolic extract obtained from the aerial parts of Verbascum macrurum have been determined by monitoring their capacity to scavenge the stable free-radical DPPH. They were also evaluated as natural preservatives against oxidative rancidity using the accelerated Rancimat method. Their activities expressed as protection factor (PF(r)) indicated that the fractions rich with phenylpropanoid glycosides were more potent compared to alpha-tocopherol and of the same magnitude as BHT, which were used as reference standards. Ten natural compounds were identified as components of this methanolic extract and were isolated by medium-pressure liquid chromatography (MPLC). Assessment of their antioxidant activities established that acteoside, a polyhydroxylated phenylpropanoid glycoside derivative, is the most potent free radical scavenger and showed the highest protection factor (PF(r)) against sunflower-oil-induced oxidative rancidity. Its activity is comparable to the synthetic antioxidant BHT and clearly superior to natural alpha-tocopherol. This compound therefore represents a very interesting candidate for use in food preservation as natural protecting agent against oxidative rancidity.     

A Spatially and Temporally Disaggregated Anthropogenic Emission Inventory in the Southern Balkan Region

ICP Forest Monitoring data collected for more than 10 years made it possible to analyse key factors responsible for changes in forest conditions on a regional European scale. Observation routines may vary between different countries, which makes it difficult to gain more insight into stress-effect relationships. The effects on defoliation of Scots pine (Pinus sylvestris L.) of air concentrations and wet deposition of acidifying compounds, as well as effects of meteorological, site, stand and tree variables were investigated in Lithuania to test the hypothesis that spatial and temporal changes in pine defoliation were closely associated with atmospheric inputs of acidity. Over the period 1994–2004 crown defoliation of more than 8,000 pine trees was monitored in totally 45 stands distributed among three National Parks, where Integrated Monitoring Stations were situated. Air concentrations of SO2, and $ {\text{SO}}^{{{\text{2 - }}}}_{{\text{4}}} $ and $ {\text{NH}}^{{\text{ + }}}_{{\text{4}}} $ deposition, as well as spring and summer precipitation and mean winter temperature were shown to be the key factors affecting defoliation. The acidifying compounds accounted for nearly 58% of the variance in pine defoliation. Meteorological factors increased the degree of explanation to 65%, and stand and site variables to 79%.     

垫上饲喂增加仔猪的采食量

美国伊利诺斯大学的试验表明 ,采用垫上饲喂法使得新断奶仔猪 (体重 5 5千克 )在断奶后头三天的日增重比对照组增加了一倍以上     

Residues of six pesticides in fresh peach—nectarine fruits after preharvest treatment

One of the key features of the new cultural systems is the control of harmful agents with environment-friendly methods. In this study, the residue levels of chlorothalonil, iprodione, bupirimate, pirimicarb, chlorpyrifos and fenoxycarb in different peach??nectarine cultivars were investigated. It was found that, with the exception of chlorpyrifos, the residue levels of all pesticides were lower than the Maximum Residues Limits (MRLs) in all peach??nectarine cultivars used. The detected levels of chlorpyrifos were higher than the MRLs in the cultivar ??Maria Bianca?? 7?days after application, but in cv. ??Legory Hkcb?? dropped to very low levels 27?days after application. The degradation over time of the above pesticides in fruits was investigated in the peach cv. ??Andross??. The detected residue levels of bupirimate, iprodione, fenoxycarb, chlorpyrifos and pirimicarb in this peach cultivar were much lower than those recommended by the European Union (MRLs) 33, 22, 22, 28, and 63?days, respectively, after application, whereas the residue levels of chlorothalonil were below the limit of detection by the analytical method used. All pesticides showed a reduction over time. When examining the levels of residues of pirimicarb and chlorpyrifos in peaches (cv. ??Andross??) sampled from different parts of the tree canopy, no significant difference was found between samples collected from the top and the middle parts of the canopy; however, residues of pirimicarb were significantly higher in samples collected at the bottom of the canopy. Overall, the pesticide regime gave residue levels much lower than those of MRLs, in all peach??nectarine cultivars. This use of chemicals is in accordance with features of the new cultural systems to produce fruits with no or minimal pesticide residues, in contrast to the conventional system in which pesticide residues are not considered. Attention should however be paid to chlorpyrifos which should be applied at least 27?days before harvest. Factors related to the cultivars and the position of fruits in the tree canopy should be considered when sampling fruits for pesticide residues analysis.     

The Road Pollution Impact on Zea mays: Inductive Modeling and Qualitative Assessment

The present paper describes the results of experiments with measurements of heavy metals concentrations in soil, leaves and roots of Zea mays cultivated near the major road in the area Araxos, Greece. The chain of ecological interactions is decomposed into individual subsystems with sufficiently small number of data samples describing concentrations of elements. The GMDH-based regression models are obtained and analyzed to assess different aspects of interactions within the chain “soil–roots–leaves”. The paper also represents a qualitative assessment technique to simplify analysis of the results, as well as to generalize the modeling results for different subsystems to the whole system.     

Testing Taylor's Power Law association of maize interplant variation with mean grain yield

Plant-to-plant variability is a crop stability component. The objective of this study in maize (Zea mays L.) was to test the validity of the theoretical background of the hypothesis that the coefficient of variation (CV) for grain yield per plant and mean yield are connected exponentially, following the Taylor's Power Law (TPL) Model. Field experimentation was conducted across two sites, two seasons, and two planting densities. Densities were the main plots, corresponding to the typical practice of 8.89 plants m^–2 (TCD) and the low-input optimal of 5.33 plants m^–2 (LCD), while hybrids were the subplots. Data from 26 subplots in the first site averaged CV values of 22.6% at the TCD and 21.9% at the LCD, and mean yields of 19.1 and 13.9 t ha^–1, respectively, following the TPL Model. The same was true for the second site, with average CVs and means of 41.5% and 14.3 t ha^–1 at the TCD and 36.8% and 11.5 t ha^–1 at the LCD. A test was performed on the simple correlation between the logarithms of variances and their respective means to investigate whether there is a systematic variance dependence on mean, thus questioning the reliability of TPL. The validity of TPL was verified in the first site. Nevertheless, there was a systematic dependence of yield variance on mean yield in the second site, implying that the CV-yield correlation might be not biologically meaningful. Conversion of the variance to remove its dependence on the mean did not validate the CV-yield negative relationship, meaning that caution is needed when interpreting the CV as a stability index for intra-crop variation. Whether the determinant factor of invalidity of TPL was the extensive intra-crop variation in the lower yielding second site can be assessed in future research.