Empirical Growth Curve Estimation Using Sigmoid Sub-functions that Adjust Seasonal Compensatory Growth for Male Body Weight of Thoroughbred Horses

Thoroughbred horses are seasonal mating animals, raised in northern regions or countries. Foals born yearly in spring generally show a typical seasonal compensatory growth pattern, in which their growth rate declines in the first winter and increases in the next spring. In this study, a new empirical adjustment approach is proposed to adjust for this compensatory growth when growth curve equations are estimated, by using 1,633 male body weights of Thoroughbreds as an illustrating example. Based on general Richards growth curve equation, a new growth curve equation was developed and fit to the weight-age data. The new growth curve equation had a sigmoid sub-function that can adjust the compensatory growth, combined with the Richards biological parameter responsible for the maturity of animals. The unknown parameters included in the equations were estimated by SAS NLMIXED procedure. The goodness of fit was examined by using Akaike’s Information Criterion (AIC). The AIC values decreased from 13,053 (general Richards equation) to 12,794 (the newly developed equation), indicating the better fit of the new equation to the weight-age data. The shape of the growth curve was improved during the period of compensatory growth. The proposed method is one of the useful approaches for adjusting seasonal compensatory growth in growth curve estimations for Thoroughbreds, and for their management during the compensatory period. Based on this approach, the optimal growth curve equations can be estimated also for female body weight of Thoroughbreds or other growth traits affected by seasonal compensatory growth.     

Age validation and growth variability of Japanese flounder <Emphasis Type="Italic">Paralichthys olivaceus</Emphasis> off the Pacific coast of northern Japan

ABSTRACT:   This study examined age and growth of Japanese flounder Paralichthys olivaceus off the Pacific coast of northern Japan, and determined whether the growth patterns of male and female fish in northern (40–41°N) and southern (37–38°15'N) waters differ. In total 8095 specimens were collected between January 1999 and December 2005. Zonation consisting of opaque and translucent bands on the otolith was evident. Within each opaque band a thin and clear check (ring mark) was observed in all specimens examined. Monthly change in the frequency of appearance of a ring mark on the outer margin of the otolith indicates that ring marks form between July and August. The von Bertalanffy growth model showed a sexual dimorphism in growth, as females grew faster and reached a larger size than males. The growth patterns obtained by tracking the observed total length for monthly collections showed a rapid increase in total length between August and October. Spatial variation in the growth pattern of male and female fish between northern and southern waters was evident, as southern fish were significantly larger than northern counterparts during 1.25–3.00 years post hatch.     

Effects of saliva collection using cotton swabs on melatonin enzyme immunoassay

Background  

Although various acceptable and easy-to-use devices have been used for saliva collection, cotton swabs are among the most common ones. Previous studies reported that cotton swabs yield a lower level of melatonin detection. However, this statistical method is not adequate for detecting an agreement between cotton saliva collection and passive saliva collection, and a test for bias is needed. Furthermore, the effects of cotton swabs have not been examined at lower melatonin level, a level at which melatonin is used for assessment of circadian rhythms, namely dim light melatonin onset (DLMO). In the present study, we estimated the effect of cotton swabs on the results of salivary melatonin assay using the Bland-Altman plot at lower level.     

Species-barrier on the cross-species oral transmission of bovine AA amyloidosis in mice

In AA amyloidosis, cross-species oral transmission has been demonstrated in several animal models. While it is known that the transmission efficiency of AA amyloidosis between different species is lower than that among the same species, the mechanism of this species-barrier is unclear. In this study, we found at first that mice orally given a large amount of bovine AA simultaneously with inflammatory stimulation did not develop AA amyloidosis. Therefore, we hypothesized that the low efficiency of the cross-species oral transmission of AA amyloidosis might be due to the low absorption rate in Peyer’s patches. To evaluate the hypothesis, we next investigated whether bovine AA was taken up by Peyer’s patches and translocated to other organs in vivo and ex vivo models. The direct absorption of bovine AA by Peyer’s patches was not observed. Besides, translocation of bovine AA to the mesenteric lymph nodes, spleen, liver, or kidney was not observed except the mesenteric lymph node of a single mouse. Thus, absorption of bovine AA by Peyer’s patches occurred much less efficiently in mouse models of cross-species oral transmission of AA amyloidosis. The present study suggests that the less efficient amyloid uptake by Peyer’s patches may be involved in the species-barrier of oral transmission of AA amyloidosis.     

Treatment of poplar callus with ferulic and sinapic acids I: incorporation and enhancement of lignin biosynthesis

Ferulic acid (FA), tetradeuteroferulic acid (DFA), sinapic acid (SA), or heptadeuterosinapic acid (DSA) was exogenously supplied to poplar (Populus alba L.) callus. Administration of FA or SA increased the lignin content of the callus to about twice that of the control callus. Gas chromatographic analysis of the alkali hydrolysate of the cell wall residue revealed that only a trace amount of SA was bound to the cell wall, and the amount of FA was less than 2% of the total callus lignin. Thioacidolysis of the DFA-treated callus indicated that DFA is effectively converted to both coniferyl and sinapyl alcohols and then incorporated into the corresponding lignin. Incorporation of DSA into syringyl lignin or guaiacyl lignin was not observed, but yields of syringyl lignin thioacidolysis products were markedly increased by DSA treatment of the callus. These results suggest that SA may not be a precursor of sinapyl alcohol and syringyl lignin per se, but it may induce or enhance the biosynthesis of syringyl lignin in poplar callus.     

Structure of cellulose microfibrils and the hydration effect in <Emphasis Type="Italic">Cryptomeria japonica</Emphasis>: a small-angle X-ray scattering study

The nanometer scale structure of cell walls in sugi wood (Cryptomeria japonica D. Don) and the hydration dependence were examined by the small angle X-ray scattering technique. Disk-shaped scattering patterns were observed for sugi wood. The radial average of two-dimensional data from the cross section could supply the scattering intensity with statistical accuracy much higher than that obtained from the sector average of the streak-shaped scattering pattern, and both the scattering intensities provided similar structural information. The scattering patterns from the cross section of the wood are characterized by rhombic or cross-shaped isointensity curves for the lower q region and by circularly symmetric isointensity curves for the higher q region. This shows that the disk-shaped scattering has two different kinds of scattering origins. The microfibril radii in the cell wall were determined by fitting the model scattering function of cylindrical fibrils to the scattering data. Values of 12.3 ± 0.3 and 12.2 ± 0.3 were obtained for the fibril radii of the neighboring earlywood and latewood, respectively, in dry specimens. A drastic structural change of the cell walls was detected with increasing water content from 40% to 100%. A low q rise in the scattering intensities below 0.1^–1 became weak and changed into a flat pattern, and the rhombic isointensity curves changed to cross-shaped patterns in the two-dimensional scattering from the cross section. The calculated radii R increased from 12.2 ± 0.3 to 13.3 ± 0.1.Part of this report was presented at the 52nd Annual Meeting of the Japan Wood Research Society, Gifu, Japan, April 2002     

Interspecific variation of photosynthesis and leaf characteristics in canopy trees of five species of Dipterocarpaceae in a tropical rain forest

Photosynthetic rate, nitrogen concentration and morphological properties of canopy leaves were studied in 18 trees, comprising five dipterocarp species, in a tropical rain forest in Sarawak, Malaysia. Photosynthetic rate at light saturation (Pmax) differed significantly across species, varying from 7 to 18 micro mol m(-2) s(-1). Leaf nitrogen concentration and morphological properties, such as leaf blade and palisade layer thickness, leaf mass per area (LMA) and surface area of mesophyll cells per unit leaf area (Ames/A), also varied significantly across species. Among the relationships with leaf characteristics, Pmax had the strongest correlation with leaf mesophyll parameters, such as palisade cell layer thickness (r2 = 0.76, P < 0.001) and Ames/A (r2 = 0.73, P < 0.001). Leaf nitrogen concentration and Pmax per unit area also had a significant but weaker correlation (r2 = 0.46, P < 0.01), whereas Pmax had no correlation, or only weakly significant correlations, with leaf blade thickness and LMA. Shorea beccariana Burck, which had the highest P(max) of the species studied, also had the thickest palisade layer, with up to five or more layers. We conclude that interspecific variation in photosynthetic capacity in tropical rain forest canopies is influenced more by leaf mesophyll structure than by leaf thickness, LMA or leaf nitrogen concentration.     

Estimating individual tree heights of sugi (Cryptomeria japonica D. Don) plantations in mountainous areas using small-footprint airborne LiDAR

Recently, it was shown that individual tree heights could be accurately estimated using small-footprint airborne light detection and ranging (LiDAR) remote sensing. Because most of the areas studied previously were limited to flat terrain, we investigated the accuracy of LiDAR-derived individual tree height estimates for different types of topographical features in mountainous forests with a steeper and more complex topography. Several middle-aged (40–50 years old) sugi (Cryptomeria japonica D. Don) plantations are found in the mountainous regions in Japan; hence, we chose 48-year-old sugi plantations to investigate the accuracy of these estimates. The surveyed area was divided into three types of topographical features; steep slope (mean slope ± SD; 37.6° ± 5.8°), gentle slope (15.6° ± 3.7°), and gentle yet rough terrain (16.8° ± 7.8°). Before estimating tree heights, the number of detected trees within each topographical feature was researched. In each of these terrains, the percentage of trees detected correctly was 74%, 86%, and 92%; the average error between LiDAR-derived and field-measured tree heights was 0.227m, –0.473m, and –0.183m; and the accuracy of the LiDAR-derived tree height estimates, given as root mean square error (RMSE), was 0.901m, 0.846m, and 0.576m, respectively. Consequently, the procedure presented in this study could detect most canopy trees and estimate individual tree heights with an accuracy better than 1m, even in a forest with a mean slope angle of approximately 38°; thus, indicating that small-footprint airborne LiDAR will be a useful tool for accurately estimating the heights of individual canopy trees in sugi plantations in mountainous areas.     

Lignification and peroxidase in tension wood ofEucalyptus viminalis seedlings

Seedlings ofEucalyptus viminalis were grown for 50 days with their stems bent so tension wood would form. Every 10 days the lignin content, monomeric composition, and peroxidase activity in the tension wood were compared with those in the lower side (opposite wood) and in vertically grown controls. The lignin content in the developing tension wood started to decrease after 10 days of bending and kept decreasing for 50 days, whereas those in control plants and opposite wood remained almost unchanged. The yields of syringaldehyde from tension wood by nitrobenzene oxidation increased, and consequently the syringyl/ guaiacyl ratio of the lignin was higher in tension wood than in opposite wood and control plants. The peroxidase ionically bound to the cell walls (IPO) catalyzed oxidation of guaiacol and syringaldazine. The syringaldazineoxidizing activity of IPO from tension wood increased, whereas the activities of IPO from opposite wood and control plants did not show any marked change. In tension wood the increase in syringaldazine-oxidizing activity of IPO was consistent with an increase in the syringaldehyde yield. This suggests that IPO contributes to syringyl lignin deposition as other enzymes involved in the monolignol biosynthesis do in tension wood formation.This study was presented at the 50th Annual Meeting of the Japan Wood Research Society, Kyoto, April 2000