Quantifying shortfalls in the knowledge on Neotropical Auchenipteridae fishes

The Neotropics harbour the greatest diversity of freshwater fish on Earth. Despite recent advances in characterizing the fish fauna, the total number of species, distributional range, evolution and ecological traits remain uncertain. Thus, we quantify shortfalls in the knowledge of taxonomy (Linnean shortfall), geographic distribution (Wallacean shortfall), evolutionary relationships (Darwinian shortfall) and feeding habits (Raunkiæran shortfall) of Auchenipteridae driftwood catfishes, one of the most representative groups of the Siluriformes family in the Neotropics. We find a steep increase in the historical accumulation of valid species over time, suggesting that 45% of the total number predicted remains to be described. Auchenipterids also remain under‐collected; only 45% of the ecoregions and less than 3% of the one‐degree grid cells covering the Neotropics are reasonably sampled. The topologies of recent phylogenies are more similar to each other than former ones, showing a tendency towards a robust phylogenetic hypothesis for this family. Current knowledge on feeding habits is biased towards a few genera and species and is still expanding with every new published study. Our study highlights specific knowledge gaps that need to be addressed: a considerable number of Auchenipteridae species remain to be described; and most of valid species lack reliable information on their geographic distribution and feeding habitat. It implies that research on fish systematic biology needs to advance and it will require a concerted effort of taxonomists, ecologists and biogeographers to reduce these gaps.     

Association between single nucleotide polymorphisms in p53 and abortion in Thoroughbred mares

Single nucleotide polymorphisms (SNPs) in the p53 gene have been studied extensively in humans. The aims of this study were to determine the frequency of the Arg/Pro SNP in p53 in Thoroughbred mares on one stud in Brazil and to correlate p53 genotypes with reproductive performance. SNPs were detected by PCR-restriction fragment length polymorphism in blood samples from 105 horses and confirmed by sequencing. The allele frequency in Thoroughbred mares at codon 72 in exon 4 was 73.3% Arg/Pro, 17.1% Arg/Arg and 9.6% Pro/Pro. The presence of Arg/Pro was significantly associated with abortion (P=0.02), while Pro/Pro mares had a lower probability of abortion (P<0.05). Using a logistic regression model, the dominance effect was significant (P=0.044; odds ratio 7.94) for abortion and additive effects were not significant (P=0.26). p53 may play a role in equine reproduction.     

Disentangling data dependency using cross-validation strategies to evaluate prediction quality of cattle grazing activities using machine learning algorithms and wearable sensor data

Wearable sensors have been explored as an alternative for real-time monitoring of cattle feeding behavior in grazing systems. To evaluate the performance of predictive models such as machine learning (ML) techniques, data cross-validation (CV) approaches are often employed. However, due to data dependencies and confounding effects, poorly performed validation strategies may significantly inflate the prediction quality. In this context, our objective was to evaluate the effect of different CV strategies on the prediction of grazing activities in cattle using wearable sensor (accelerometer) data and ML algorithms. Six Nellore bulls (average live weight of 345 ± 21 kg) had their behavior visually classified as grazing or not-grazing for a period of 15 d. Elastic Net Generalized Linear Model (GLM), Random Forest (RF), and Artificial Neural Network (ANN) were employed to predict grazing activity (grazing or not-grazing) using 3-axis accelerometer data. For each analytical method, three CV strategies were evaluated: holdout, leave-one-animal-out (LOAO), and leave-one-day-out (LODO). Algorithms were trained using similar dataset sizes (holdout: n = 57,862; LOAO: n = 56,786; LODO: n = 56,672). Overall, GLM delivered the worst prediction accuracy (53%) compared with the ML techniques (65% for both RF and ANN), and ANN performed slightly better than RF for LOAO (73%) and LODO (64%) across CV strategies. The holdout yielded the highest nominal accuracy values for all three ML approaches (GLM: 59%, RF: 76%, and ANN: 74%), followed by LODO (GLM: 49%, RF: 61%, and ANN: 63%) and LOAO (GLM: 52%, RF: 57%, and ANN: 57%). With a larger dataset (i.e., more animals and grazing management scenarios), it is expected that accuracy could be increased. Most importantly, the greater prediction accuracy observed for holdout CV may simply indicate a lack of data independence and the presence of carry-over effects from animals and grazing management. Our results suggest that generalizing predictive models to unknown (not used for training) animals or grazing management may incur poor prediction quality. The results highlight the need for using management knowledge to define the validation strategy that is closer to the real-life situation, i.e., the intended application of the predictive model.     

Effect of acaricides on the activity of a Boophilus microplus glutathione S-transferase

In the present study, we report the effect of several acaricides on the enzyme activity of a Boophilus microplus recombinant glutathione S-transferase (rGST). GST was expressed in Escherichia coli and was purified with glutathione (GSH) affinity column chromatography. The kinetic constants were determined by reacting GST with the substrates 1-chloro-2,4-dinitrobenzene (CDNB) and glutathione. We report the effect of several acaricides on the enzyme activity of rGST. Some acaricides (ethion, amitraz, chlorpyrifos, DDT, cypermethrin, diazinon, ivermectin, deltamethrin and flumethrin) inhibited rGST. Contrarily, coumaphos had an activating effect. Although the accurate mechanisms of the B. microplus resistance to acaricides remain elusive, this work helps in understanding how acaricides can interact with GST.     

Intake,digestibility, and growth performance of Girolando bulls supplemented on pasture in Bahia,Brazil

Tropical Animal Health and Production - The objective of this trial was to evaluate intake, digestibility, and growth performance of Girolando bulls submitted to two nutritional planes while...     

Fatty acid profile and carcass characteristics in castrated and uncastrated hair lambs

The aim of this study was to investigate the effects of castration on carcass characteristics and fatty acid profile of visceral fat and meat from lambs. Eighteen six-month-old Santa Inês male lambs (18.9?±?2.4 kg of body weight (BW)) were used. Animals were assigned to two treatments according to their sexual condition: uncastrated (U) or castrated (C). During a 98-day experimental period, animals were kept on an Andropogon gayanus grass pasture area of 1 ha and supplemented with 200 g/animal/day of concentrate mixture. Water and mineral salt were available ad libitum. The lambs were weighed fortnightly, and at the last day of the trial, they were slaughtered for evaluation of carcass characteristics and fatty acids profile of perirenal fat and longissimus lumborum muscle samples. Castrated lambs showed higher BW than U during most part of the experiment (p?<?0.05). Fat deposition was higher in C lambs as evidenced by their increased carcass fat cover. Meat from U lambs showed lower content of C_16:0 and higher polyunsaturated fatty acids (PUFA) (p?<?0.05) than that from C (U, 14.3 and C, 10.5%). Conjugated linoleic acid (CLA) content was not affected by castration (p?>?0.05) (U, 0.74 and C, 0.76%). The cis-9, cis-12 C_18:2n-6 (U, 10.6 and C, 6.86%) fatty acid and the PUFA:SFA (saturated fatty acids) ratio (U, 0.36 and C, 0.25) were higher in the muscle of U lambs (p?<?0.05), indicating that the meat from U animals may provide more benefits to human health than that of C.

     

Effect of high‐density lipoprotein on oocyte maturation and bovine embryo development in vitro

High‐density lipoprotein (HDL) is the main lipoprotein in the follicular fluid, and it has anti‐inflammatory, antioxidant and cryoprotectant properties. The anti‐inflammatory potential and antioxidant potential are derived from its lipid composition, especially the apolipoprotein AI (ApoAI) and paraoxonase 1 (PON1). The aim of this study was to evaluate the effect of HDL during in vitro maturation (IVM) on oocyte maturation and early bovine embryo development. For this, cumulus–oocyte complexes (COCs) were obtained from bovine ovaries collected at a local slaughterhouse. COCs (n = 2,250) were allocated into three groups (n = 50 COCs/group) according to the addition of HDL protein (HDL‐P) during IVM for 22 hr: 0 (control), 50 and 150 mg/dl. After IVM, COCs were inseminated (in vitro fertilization) and cultivated for 7 days. Total cholesterol concentration, total protein, triglycerides and ApoAI concentrations on IVM medium increased proportionally to HDL‐P addition. However, PON1 activity was not detected in any treatment. The addition of HDL‐P did not affect nuclear maturation rate, endogenous reactive oxygen species and glutathione levels in COCs (p > 0.05). The highest HDL‐P concentration (150 mg/dl) decreased cleavage and blastocyst rate (p < 0.05). Moreover, the HDL‐P 150 mg/dl group had lower cellular count/blastocyst than the 50 mg/dl group (p < 0.05). However, the addition of HDL‐P did not affect relative gene expression of evaluated genes. In conclusion, the complex HDL/ApoAI obtained from human plasma, in the absence of PON1 activity during in vitro oocyte maturation, decreased initial embryo development.     

Co‐existing monophasic teratoma and uterine adenocarcinoma in a female dog

Ovarian teratomas are occasionally reported in dogs; the rarest type is the monophasic teratoma, composed of tissues originating from only one germ layer. Canine endometrial adenocarcinomas are also rare in dogs and mainly affect geriatric females. This report describes the case of co‐existing ovarian teratoma and uterine adenocarcinoma in a 10‐year‐old nulliparous female Boxer presented with lethargy, anorexia and purulent vaginal discharge. Abdominal ultrasonography evidenced pyometra and a mass in the left ovary. This was composed of a uniform whitish tissue with multiple cystic structures. The histology revealed an atrophy of the ovarian parenchyma, compressed by a proliferation of well‐differentiated nervous tissue staining positively to vimentin, S100 and neuronal specific enolase (NSE), and negatively to keratin and inhibin. The left uterine horn, whose diameter was markedly increased, showed foci of endometrial cellular atypia, evident nucleoli and mitoses, at light microscopy. To our best knowledge, this is the first report of a co‐existing ovarian monophasic teratoma and endometrial adenocarcinoma, two rare reproductive neoplasia in dogs.     

Metabolic responses of matrinxã, Brycon amazonicus (Spix & Agassiz, 1829), exposed to environmental nitrite

Nitrite is usually found in aquatic environments where nitrification process occurs. This ion can cause several injuries to aquatic species, particularly fish. Nitrite reacts with haemoglobin yielding the non‐functional methaemoglobin, which leads to many physiological consequences such as functional anaemia and supposed hypoxia. Metabolism of the freshwater teleost matrinxã, Brycon amazonicus, exposed to environmental 0.6 mg L^?1 of nitrite N‐NO₂^? for 96 h was studied, and the fermentative/oxidative preference was gauged. Concentrations of glycogen, glucose, lactate, pyruvate and ammonia, plus the activities of lactate, glutamate and malate dehydrogenase were assayed. The exposure resulted in a metabolic profile that allowed inferring the continuity of oxidative metabolism. Catabolism of amino acids prevailed or was apparently exacerbated by inferred branchial injury and consequent impairment of nitrogen excretion. Moreover, the studied enzymes glutamate dehydrogenase, lactate dehydrogenase and malate dehydrogenase from brain and heart were little affected by nitrite. The expected fermentative metabolism due to the high methaemoglobin formation was not observed.