Barriers to natural regeneration in temperate forests across the USA

New Forests - For millennia, natural disturbance regimes, including anthropogenic fire and hunting practices, have led to forest regeneration patterns that created a diversity of forest lands...     

Relationship between greenhouse gas emissions and changes in soil gas diffusivity in a field experiment with biochar and lime

Reducing greenhouse gas emissions from arable soil while maintaining productivity is a major challenge for agriculture. Biochar is known to reduce N₂O emissions from soil, but the underlying mechanisms are unclear. This study examined the impact of green waste biochar (20 Mg ha^?1) and lime (CaCO₃; 2 Mg ha^?1) application on soil gas transport properties and related changes in these to soil N₂O and CO₂ emissions measured using automated chambers in a field experiment cropped with maize. In situ soil water content monitoring was combined with laboratory measurements of relative soil gas diffusion coefficient (D_p/D₀) at different matric potentials, to determine changes in D_p/D₀ over time. Cumulative N₂O emissions were similar in the control and lime treatment, but much lower in the biochar treatment. Cumulative CO₂ emissions decreased in the order: lime treatment > biochar treatment > control soil. When N₂O emissions were not driven by excess N supply shortly after fertilisation, they were associated with D_p/D₀ changes, whereby decreases in D_p/D₀ corresponded to N₂O emissions peaks. No distinct pattern was observed between CO₂ emissions and D_p/D₀. Cumulative N₂O emissions were positively related to number of days with D_p/D₀ < 0.02, a critical limit for soil aeration. These results indicate that improved soil gas diffusivity, and hence improved soil aeration, may explain the effect of biochar in reducing N₂O emissions. They also suggest that knowledge of D_p/D₀ changes may be key to explaining N₂O emissions.     

Natural degradation of low-level petroleum hydrocarbon contamination under crop management

Journal of Soils and Sediments - Natural degradation of petroleum hydrocarbons (PHC) is a crucial process to consider when managing contaminated soils. However, the degradation rate is dictated by...     

Physical carbon‐sequestration mechanisms under special consideration of soil wettability

The protective impact of aggregation on microbial degradation through separation has been described frequently, especially for biotically formed aggregates. However, to date little information exists on the effects of organic‐matter (OM) quantity and OM quality on physical protection, i.e., reduced degradability by microorganisms caused by physical factors. In the present paper, we hypothesize that soil wettability, which is significantly influenced by OM, may act as a key factor for OM stabilization as it controls the microbial accessibility for water, nutrients, and oxygen in three‐phase systems like soil. Based on this hypothesis, the first objective is to evaluate new findings on the organization of organo‐mineral complexes at the nanoscale as one of the processes creating water‐repellent coatings on mineral surfaces. The second objective is to quantify the degree of alteration of coated surfaces with regard to water repellence. We introduce a recently developed trial that combines FTIR spectra with contact‐angle data as the link between chemical composition of OM and the physical wetting behavior of soil particles. In addition to characterizing the wetting properties of OM coatings, we discuss the implications of water‐repellent surfaces for different physical protection mechanisms of OM. For typical minerals, the OM loading on mineral surfaces is patchy, whereas OM forms nanoscaled micro‐aggregates together with metal oxides and hydroxides and with layered clay minerals. Such small aggregates may efficiently stabilize OM against microbial decomposition. However, despite the patchy structure of OM coating, we observed a relation between the chemical composition of OM and wettability. A higher hydrophobicity of the OM appears to stabilize the organic C in soil, either caused by a specific reduced biodegradability of OM or indirectly caused by increased aggregate stability. In partly saturated nonaggregated soil, the specific distribution of the pore water appears to further affect the mineralization of OM as a function of wettability. We conclude that the wettability of OM, quantified by the contact angle, links the chemical structure of OM with a bundle of physical soil properties and that reduced wettability results in the stabilization of OM in soils.     

Sensomics mapping and identification of the key bitter metabolites in Gouda cheese

Application of a sensomics approach on the water-soluble extract of a matured Gouda cheese including gel permeation chromatography, ultrafiltration, solid phase extraction, preparative RP-HPLC, and HILIC combined with analytical sensory tools enabled the comprehensive mapping of bitter-tasting metabolites. LC-MS-TOF and LC-MS/MS, independent synthesis, and sensory analysis revealed the identification of a total of 16 bitter peptides formed by proteolysis of caseins. Eleven previously unreported bitter peptides were aligned to beta-casein, among which 6 peptides were released from the sequence beta-CN(57-69) of the N terminus of beta-casein and 2 peptides originated from the C-terminal sequence beta-CN(198-206). The other peptides were liberated from miscellaneous regions of beta-casein, namely, beta-CN(22-28), beta-CN(74-86), beta-CN(74-77), and beta-CN(135-138), respectively. Six peptides were found to originate from alpha(s1)-casein and were shown to have the sequences alpha(s1)-CN(11-14), alpha(s1)-CN(56-60), alpha(s1)-CN(70/71-74), alpha(s1)-CN(110/111-114), and alpha(s1)-CN(135-136). Sensory evaluation of the purified, synthesized peptides revealed that 12 of these peptides showed pronounced bitter taste with recognition thresholds between 0.05 and 6.0 mmol/L. Among these peptides, the decapeptide YPFPGPIHNS exhibited a caffeine-like bitter taste quality at the lowest threshold concentration of 0.05 mmol/L.     

Impact of biotransformation and bioavailability on the toxicity of the insecticides alpha-cypermethrin and chlorfenvinphos in earthworm

Knowledge about the bioavailability and metabolism of pesticides in soil organisms facilitates interpretation of its toxicity in soil. The present study relates uptake kinetics and metabolism of two insecticides, the pyrethroid alpha-cypermethrin (alpha-CYP) and the organophosphate chlorfenvinphos (CFVP), in the earthworm Eisenia fetida to their lethal and sublethal toxicity. Experiments were conducted in two soils with different organic matter contents to provide media with contrasting sorption capacity for the insecticides. The results showed that organophosphate CFVP was, when taken up by earthworms, rapidly and irreversibly bound to biomolecules and the fraction of extractable parent insecticide and metabolites was low. In contrast, alpha-CYP was rapidly metabolized by earthworms but did not form conjugates. It seems that the phase II metabolism of alpha-CYP is inhibited in earthworms, resulting in an increasing accumulation of its metabolites. Instantaneous binding of non-altered CFVP to the target site presumably resulted in a higher toxicity compared to alpha-CYP and explains the small difference between lethal and reproduction toxicity. For alpha-CYP, however, accumulation of alpha-CYP metabolites in earthworms during chronic exposure may explain the large observed difference between lethal and sublethal toxicity. Bioaccumulation and toxicity of either insecticide decreased with increasing organic matter content in soil, emphasizing the role of compound sorption on bioavailability and toxicity for soil organisms.     

Foam-stabilizing effects and cling formation patterns of iso-alpha-acids and reduced iso-alpha-acids in lager beer

Foam-stabilizing properties and cling formation patterns of iso-alpha-acids and reduced iso-alpha-acids were investigated using an unhopped lager beer. Unhopped beer was dosed with iso-alpha-acid (Iso), rho-iso-alpha-acid (Rho), tetrahydro-iso-alpha-acid (Tetra), and hexahydro-iso-alpha-acid (Hexa), separately, over a range of concentrations from 2 to 10 ppm. A uniform foam was created by Inpack 2000 Flasher Head and was measured by a NIBEM Foam Stability Tester (NIBEM-TPH) followed by a NIBEM Cling Meter (NIBEM-CLM) to determine the relationship between the concentration and NIBEM-30 and the cling formation ability of each compound. The foam-stabilizing power was determined to be Tetra, Hexa, Iso, and Rho from the strongest to weakest. Linear regression models were created using the NIBEM-TPH data set, and on the basis of 95% confidence intervals, the foam stability of Tetra or Hexa became significantly larger than that of Iso when 2.4 or 4.2 ppm of Tetra or Hexa was used as a replacement for Iso, respectively. Cling formation patterns could be categorized into three groups: "ring", "mesh", and "powdery". The control beer had the lowest foam stability and did not yield any foam cling.     

High-level expression of recombinant beta-galactosidases in Lactobacillus plantarum and Lactobacillus sakei using a Sakacin P-based expression system

This work presents the cloning and expression of the genes encoding heterodimeric beta-galactosidases from Lactobacillus reuteri L103, Lactobacillus acidophilus R22, Lactobacillus plantarum WCFS1, and Lactobacillus sakei Lb790. These enzymes consist of two subunits of approximately 73 and 35 kDa, which are encoded by two overlapping genes, lacL and lacM, respectively. We have cloned these genes into the lactobacillal expression vectors pSIP403 and pSIP409, which are based on the sakacin P operon of L. sakei ( S?rvig et al. Microbiology 2005, 151, 2439- 2449 ), and expressed them in the host strains L. plantarum WCFS1 and L. sakei Lb790. Results varied considerably, ranging from 2.23 to 61.1 U/mg of beta-galactosidase activity, depending on the origin of the lacLM genes, the host strain, and the expression vector used. Highest expression levels were obtained in a laboratory cultivation of L. plantarum WCFS1 harboring the plasmid pEH3R containing the lacLM gene from L. reuteri L103. These cultivations yielded approximately 23 000 U of beta-galactosidase activity per liter, corresponding to the formation of roughly 100 mg of recombinant protein per liter of fermentation medium, and beta-galactosidase levels amounted to 55% of the total intracellular protein of the host organism. To further verify the suitability of this expression system, recombinant beta-galactosidase from L. reuteri was purified to apparent homogeneity. The properties of the purified enzyme were essentially identical with the properties of purified native beta-galactosidase from L. reuteri L103. The presented results lead the way to efficient overproduction of beta-galactosidase in a food-grade expression system, which is of high interest for applications in food industry.