Long-range interactions within a nonnative protein

Protein folding and unfolding are coupled to a range of biological phenomena, from the regulation of cellular activity to the onset of neurodegenerative diseases. Defining the nature of the conformations sampled in nonnative proteins is crucial for understanding the origins of such phenomena. We have used a combination of nuclear magnetic resonance (NMR) spectroscopy and site-directed mutagenesis to study unfolded states of the protein lysozyme. Extensive clusters of hydrophobic structure exist within the wild-type protein even under strongly denaturing conditions. These clusters involve distinct regions of the sequence but are all disrupted by a single point mutation that replaced residue Trp62 with Gly located at the interface of the two major structural domains in the native state. Thus, nativelike structure in the denatured protein is stabilized by the involvement of Trp62 in nonnative and long-range interactions.     

Community-level impacts induced by introduced largemouth bass and bluegill in farm ponds in Japan

Largemouth bass Micropterus salmoides and bluegill Lepomis macrochirus have been introduced into many countries and have become cosmopolitan exotic species. However, only a few studies show their impact on introduced communities. To investigate their impact, we performed natural snapshot experiments in 15 farm ponds in Saitama prefecture, eastern Japan. We selected 10 and 5 small ponds in similar environmental conditions, but with and without exotics, respectively. The numbers of fish, crustaceans, and nymphal odonates were smaller in ponds where exotics were found and some species were considered to be locally extinct in several ponds. On the other hand, the numbers of benthic organisms, i.e. tadpoles, chironomids, chaoborids, and Oligochaeta were more abundant in ponds with exotics. These two groups of organisms were separated clearly on the first axis of DCA, which indicats that this difference was mainly induced by bass predation. This result suggests a trophic cascade in which top-down effects induced by exotics propagated to fish, crustaceans, and nymphal odonates directly and to some benthic organisms indirectly. Therefore, when one is to conserve native organisms, attention should be paid not only to direct negative effects, but also to indirect effects propagating to various trophic levels. Because farm ponds are typical Japanese small lentic systems having rich biodiversities and bass and bluegill have been shown to change farm pond communities widely, conservational treatments including eradication of exotic fish should be conducted immediately.     

Improvement of the functional properties of sucrose stearate by phosphorylation

Phosphorylated sucrose stearate (SE-P) was prepared by dry-heating sucrose stearate (SE) with metaphosphoric acid. The main product was deduced to be a monophosphosucrose monostearate by chemical analysis and mass spectrometry. SE-P exhibited remarkably higher solubility and emulsifying properties than SE, especially in the acidic region and in the presence of NaCl, and SE-P bound Ca2+ at a 1:1 molar ratio (SE-P/Ca2+). SE-P markedly reduced the viscosity of potato starch paste and inhibited retrogradation, whereas SE did not reduce it so much. It is thus expected that phosphorylation would be an appropriate method for improving the functional properties of SE and that SE-P could be used as a novel emulsifier and modifier with Ca2+-binding ability for starchy foods.     

Polyphenol-induced inhibition of the response of na(+)/glucose cotransporter expressed in Xenopus oocytes

To study the effects of polyphenols on the Na(+)/glucose cotransporter (SGLT1) response, SGLT1 was expressed in Xenopus oocytes by injecting cRNA synthesized from the cloned cDNA of the small intestine cotransporter of rats, and the electrical response elicited by glucose or galactose was measured by a voltage clamping method. Most phenol derivatives had no effect on the response. However, the polyphenols (+)-catechin, (-)-epicatechin gallate (ECg), and (-)-epigallocatechin gallate (EGCg), which are components of green tea, caused an inhibition of the response, which was almost independent of glucose concentration. The inhibition constants were estimated to be 2.3 mM for (+)-catechin and 0.45 mM for both ECg and EGCg, assuming the noncompetitive inhibition mechanism. Saponin prepared from tea seeds also inhibited the response significantly. Tannic acid and aqueous extracts of teas induced nonspecific electrical responses in both cRNA-injected and noninjected oocytes at lower concentrations than those that caused an inhibition of the SGLT1 response when their dose-dependent effects were examined. These results are possibly helpful in the development of a dietary supplement for diabetic patients.     

紫外线(UV-B)照射对水稻产量及稻米蛋白质含量的影响

以抗紫外线UV-B的日本粳稻品种Sasanishiki为材料,1999年和2000年在大田条件下,探讨了不同生育时期的UV-B处理对水稻产量、糙米的大小及蛋白质含量的影响.结果表明,营养生长期(移栽至幼穗分化)、生殖生长期(幼穗分化至抽穗)及抽穗成熟期的UV-B处理对Sasanishiki的产量及其构成因素的影响不显著;生殖生长期(幼穗分化至抽穗)与     

Effects of dietary phytol on tissue accumulation of phytanic acid and pristanic acid and on the tissue lipid profiles in mice

Recent in vitro evidence suggests that the phytol‐derived fatty acids, phytanic acid (PA) and pristanic acid (PrA), are components of animal products with the potential to cause both beneficial and harmful effects on human health. In this study, we investigated the in vivo tissue accumulation of PA and PrA and the changes in tissue lipid profiles, using mice fed a phytol‐containing diet. After 4 weeks of treatment with a diet containing 1.0% phytol, plasma, adipose tissue, liver, and brain were collected and their lipid profiles were biochemically and gas‐chromatographically determined. Dietary phytol caused PA and PrA accumulation in the adipose tissue and liver but not in the brain, and reduced plasma and liver triacylglycerol levels. Phytol intake also decreased the fatty acid concentrations in the adipose tissue, especially polyunsaturated fatty acids such as linoleic acid, but increased the concentrations of these fatty acids in the liver. However, dietary phytol had a low impact on the brain lipid profile. This study suggests that dietary phytol intake caused accumulation of PA and PrA and modified lipid profiles in the adipose tissue and liver, but that the brain is an insusceptible tissue to dietary phytol‐induced changes.     

Influence of feeding regime on fatty acid composition in young red-spotted grouper Epinephelus akaara

ABSTRACT:   Young red-spotted grouper Epinephelus akaara with an average total length of 3.4 cm were divided into five groups in floating net-cages, and reared under satiated conditions with different feeding frequencies (0.5, 1, 2, 4 and 8 times per day) for 40 days. Total food intake increased with feeding frequency. Feeding four times per day resulted in the highest growth and food conversion efficiency. Total lipid accumulation in the muscle, liver and intraperitoneal fat body (IPF) increased with feeding frequency. Red-spotted grouper were found to contain a high proportion of docosahexaenoic acid (DHA) in the muscle. Fish fed 0.5 times per day were characterized as having a high proportion of DHA in triglycerides (TG) in muscle (80%), liver (69%) and IPF (18%). Increasing saturated fatty acids and a relative reduction of DHA were observed in the muscle TG as the feeding frequency increased. Frequent feeding accelerated the accumulation of eicosapentaenoic acid and saturated acids in the liver and IPF. Low saturated acids and a subsidiary proportional increase in DHA were the result of the low lipid reserves. A possible role for DHA and saturated acids are discussed with regard to lipid reserves.     

Microbial hydrolytic enzyme activity in the sediments of a net cage aquaculture area

Potential microbial extracellular leucine-aminopeptidase (LAP) and β-glucosidase (βGlc) activity in the sediments of a red sea-bream (Pagrus major) aquaculture area were measured. Temporal variations in these enzymatic activities were low and stable from December 1999 to April 2000. They rose but fluctuated widely from May to November 2000. LAP activity in the sediments ranged from 334 to 4461 nmol/g per h in the 0–1-cm layer and from 106 to 258 nmol/g per h in the 4–5-cm layer. βGlc activity ranged from 221 to 4121 nmol/g per h in the 0–1-cm layer and from 18 to 238 nmol/g per h in the 4–5-cm layer. These values were higher than others reported and the organic matter load from the fish farms appeared to promote these enzymatic activities, although the relationship was not linear. The ratio of LAP to βGlc was smaller than other reported values in marine sediments or in water samples from the same aquaculture area, suggesting that not only quantitatively but qualitatively an aspect of organic matter degradation in the sediment might be changed by the heavy supply of organic materials from fish farms.