Modeling carbon allocation in trees: a search for principles

We review approaches to predicting carbon and nitrogen allocation in forest models in terms of their underlying assumptions and their resulting strengths and limitations. Empirical and allometric methods are easily developed and computationally efficient, but lack the power of evolution-based approaches to explain and predict multifaceted effects of environmental variability and climate change. In evolution-based methods, allocation is usually determined by maximization of a fitness proxy, either in a fixed environment, which we call optimal response (OR) models, or including the feedback of an individual's strategy on its environment (game-theoretical optimization, GTO). Optimal response models can predict allocation in single trees and stands when there is significant competition only for one resource. Game-theoretical optimization can be used to account for additional dimensions of competition, e.g., when strong root competition boosts root allocation at the expense of wood production. However, we demonstrate that an OR model predicts similar allocation to a GTO model under the root-competitive conditions reported in free-air carbon dioxide enrichment (FACE) experiments. The most evolutionarily realistic approach is adaptive dynamics (AD) where the allocation strategy arises from eco-evolutionary dynamics of populations instead of a fitness proxy. We also discuss emerging entropy-based approaches that offer an alternative thermodynamic perspective on allocation, in which fitness proxies are replaced by entropy or entropy production. To help develop allocation models further, the value of wide-ranging datasets, such as FLUXNET, could be greatly enhanced by ancillary measurements of driving variables, such as water and soil nitrogen availability.     

Towards assessing the sustainability of European logging operations

The forest-based sector has been at the forefront in operationally implementing the sustainability concept, its associated principles and indicators for sustainable forest management. Several methods have been developed to study environmental impacts of forestry activities, but none of the existing tools address all the dimensions of sustainability along the whole forest wood chain (FWC) in a balanced way. Consequently, the decision was made to develop a tool for sustainability impact assessment (ToSIA), the modelling framework for sustainability impact assessment of FWCs. The objective of the EU Project Eforwood was to develop ToSIA, a decision support tool. Within ToSIA, a FWC is modelled as a number of interconnected processes. For each process, a range of economic, environmental and social indicators and their respective values are calculated, thus representing the three pillars of sustainability. By this method, the multifunctionality of forests can be assessed and supply chains can be compared with respect to sustainability. Sensitivity analysis and scenario techniques can be applied to learn about the effect of expected changes to the structure of the chain, the material flows and the indicator values. In order to provide the tool with information about forest and logging operations, data were collected at two fundamental levels: (1) a regional level with case studies in Scandinavia, Iberia and Baden-Württemberg and (2) a European level with a case study that reflects conditions in the 27 countries of the European Union. This paper describes and details the harvesting and logging processes for the European countries. The results are displayed for each of the three regional case studies as well as aggregated to five principal areas in Europe: Eastern, Northern, Western, Central and Southwest Europe.     

A Male Genetic Map Designed for Quantitative Trait Loci Mapping in Norwegian Cattle

A male bovine linkage map was constructed using six half-sib families of the Norwegian Cattle population. The family material consisted of six sires and 285 sons, with the number of sons per sire ranging from 32 to 71. Of the 288 markers analysed, 261 were anonymous microsatellites and 27 were coding genes. Eleven of the coding genes were mapped by a two-step procedure involving intron/exon sequencing in the six sires and development of polymerase chain reaction-based methods for efficient genotyping in heterozygous families. Linkage analysis including both informative and non-informative sons was performed in order to obtain unbiased estimates of recombination fractions. The autosomal genome length of the Norwegian Cattle Map (NCM) was estimated as 2682 cM, with an average interval of 12.5 cM. The map provides sufficient marker density for scanning the whole bovine genome to locate quantitative trait loci. The large number of common markers between NCM and previously published maps will contribute to the comparison and integration of bovine maps.     

Nutritive Value of Four Soybean Products in Diets for Atlantic Salmon (Salmo salar,L.)

Abstract

Four processed soybean products were evaluated as protein sources for Atlantic salmon: solvent-extracted soybean meal (SBM44), dehulled and solvent-extracted soybean meal (SBM50), dehulled full-fat soybean meal (FFSBM) and soybean concentrate (SBC). The soybean products replaced high-quality fish meal at levels corresponding to 0, 14, 28, 42 and 56% soybean protein of total protein.

Dietary inclusion of SBC, at the expense of fish meal, did not affect weight gain, carcass lipids, fecal excretion of nutrients or fecal dry matter content significantly. The nutritive value of the SBC protein appeared comparable to that of the fish meal. The three other soybean products impaired performance increasingly with increasing levels of inclusion, indicating lower nutritive value than for the fish meal. The favourable results seen with SBC indicated a great potential of soybean to become an important protein source for Atlantic salmon through improved processing.     

Extraction of mobile element fractions in forest soils using ammonium nitrate and ammonium chloride

The extraction of earth alkaline and alkali metals (Ca, Mg, K, Na), heavy metals (Mn, Fe, Cu, Zn, Cd, Pb) and Al by 1 M NH₄NO₃ and 0.5 M NH₄Cl was compared for soil samples (texture: silt loam, clay loam) with a wide range of pH(CaCl₂) and organic carbon (OC) from a forest area in W Germany. For each of these elements, close and highly significant correlations could be observed between the results from both methods in organic and mineral soil horizons. The contents of the base cations were almost convertible one‐to‐one. However, for all heavy metals NH₄Cl extracted clearly larger amounts, which was mainly due to their tendency to form soluble chloro complexes with chloride ions from the NH₄Cl solution. This tendency is very distinct in the case of Cd, Pb, and Fe, but also influences the results of Mn and Zn. In the case of Cd and Mn, and to a lower degree also in the case of Pb, Fe, and Zn, the effect of the chloro complexes shows a significant pH dependency. Especially for Cd, but also for Pb, Fe, Mn, Zn, the agreement between both methods increased, when pH(CaCl₂) values and/or contents of OC were taken into account. In comparison to NH₄Cl, NH₄NO₃ proved to be chemically less reactive and, thus, more suitable for the extraction of comparable fractions of mobile heavy metals. Since both methods lead to similar and closely correlated results with regard to base cations and Al, the use of NH₄NO₃ is also recommended for the extraction of mobile/exchangeable alkali, earth alkaline, and Al ions in soils and for the estimation of their contribution to the effective cation‐exchange capacity (CEC). Consequently, we suggest to determine the mobile/exchangeable fraction of all elements using the NH₄NO₃ method. However, the applicability of the NH₄NO₃ method to other soils still needs to be investigated.     

Porcine intestinal epithelial cell lines as a new in vitro model for studying adherence and pathogenesis of enterotoxigenic Escherichia coli

Enterotoxigenic Escherichia coli (ETEC) infections result in large economic losses in the swine industry worldwide. The organism causes diarrhea by adhering to and colonizing enterocytes in the small intestines. While much progress has been made in understanding the pathogenesis of ETEC, no homologous intestinal epithelial cultures suitable for studying porcine ETEC pathogenesis have been described prior to this report. In the current study, we investigated the adherence of various porcine ETEC strains to two porcine (IPEC-1 and IPEC-J2) and one human (INT-407) small intestinal epithelial cell lines. Each cell line was assessed for its ability to support the adherence of E. coli expressing fimbrial adhesins K88ab, K88ac, K88ad, K99, F41, 987P, and F18. Wild-type ETEC expressing K88ab, K88ac, and K88ad efficiently bound to both IPEC-1 and IPEC-J2 cells. An ETEC strain expressing both K99 and F41 bound heavily to both porcine cell lines but an E. coli strain expressing only K99 bound very poorly to these cells. E. coli expressing F18 adhesin strongly bound to IPEC-1 cells but did not adhere to IPEC-J2 cells. The E. coli strains G58-1 and 711 which express no fimbrial adhesins and those that express 987P fimbriae failed to bind to either porcine cell line. Only strains B41 and K12:K99 bound in abundance to INT-407 cells. The binding of porcine ETEC to IPEC-J2, IPEC-1 and INT-407 with varying affinities, together with lack of binding of 987P ETEC and non-fimbriated E. coli strains, suggests strain-specific E. coli binding to these cell lines. These findings suggest the potential usefulness of porcine intestinal cell lines for studying ETEC pathogenesis.     

Effect of feed type and essential oil product on equine chewing activity

The ingestive and post-digestion effect of a blend of special essential oil compounds (EO) on eating, chewing and faecal parameters were measured in horses. Ingestive effects appear after no adaptation. Post-digestion effects appear after adaptation. Six Icelandic horses were assigned to two groups in a Latin Square subplot design with EO treatments to four different roughage types and four different concentrates. The horses were fed four different roughage meals and two different concentrate meals on each of the four sampling days. Eating time and saliva were observed during meals. Jaw movements (JM) were recorded using a special chewing halter. Eating time was derived from JM and related to DM intake. The size characteristics of faecal particles were measured by using image analysis. All chewing characteristics measured were significantly affected by roughage (p < 0.001) and concentrate type (p < 0.01). EO had a significant ingestive effect on the frequency of observed saliva during concentrate meals. No significant (p < 0.05) post-digestive or ingestive effect of EO was found for any measured chewing characteristic, which was reflected in the absence of effect on faecal particle dimensions. In conclusion, effect of type of roughage and concentrate was more significant than potential effects of EO.