Variety of non‐invasive continuous monitoring methodologies including electrical impedance tomography provides novel insights into the physiology of lung collapse and recruitment – case report of an anaesthetized horse

IntroductionThe use of alveolar recruitment maneuvers during general anaesthesia of horses is a potentially useful therapeutic option for the ventilatory management. While the routine application of recruitments would benefit from the availability of dedicated large animal ventilators their impact on ventilation and perfusion in the horse is not yet well documented nor completely understood.Case historyA healthy 533 kg experimental horse underwent general anaesthesia in lateral recumbency. During intermittent positive pressure ventilation a stepwise alveolar recruitment maneuver was performed.ManagementAnaesthesia was induced with ketamine and midazolam and maintained with isoflurane in oxygen using a large animal circle system. Mechanical ventilation was applied in pressure ventilation mode and an alveolar recruitment maneuver performed employing a sequence of ascending and descending positive end expiratory pressures. Next to the standard monitoring, which included spirometry, additionally three non-invasive monitoring techniques were used: electrical impedance tomography (EIT), volumetric capnography and respiratory ultrasonic plethysmography. The functional images continuously delivered by EIT initially showed markedly reduced ventilation in the dependent lung and allowed on-line monitoring of the dynamic changes in the distribution of ventilation during the recruitment maneuver. Furthermore, continuous monitoring of compliance, dead space fraction, tidal volumes and changes in end expiratory lung volume were possible without technical difficulties.Follow upThe horse made an unremarkable recovery.ConclusionThe novel non-invasive monitoring technologies used in this study provided unprecedented insights into the physiology of lung collapse and recruitment. The synergic information of these techniques holds promise to be useful when developing and evaluating new ventilatory strategies in horses.     

Anomalous conditions in the south-eastern Bering Sea, 1997: nutrients, phytoplankton and zooplankton

Anomalies in the regional weather over the south-eastern Bering Sea during spring and summer of 1997 resulted in significant differences in nutrient availability, phytoplankton species composition, and zooplankton abundance over the continental shelf as compared with measurements in the 1980s. Calm winds and the reduction of cloud cover in spring and summer produced a very shallow mixed layer in which nitrate and silicate were depleted after an April diatom bloom. High submarine light levels allowed subsequent phytoplankton growth below the pycnocline and eventual depletion of nitrate from the water column to depths of 70 m or more. Thus, total new production during 1997 may have exceeded that of previous years when nitrate was not depleted below the pycnocline. A bloom of the coccolithophorid, Emiliania huxleyi , was observed in early July in the warm, nutrient-depleted waters over the middle and inner shelf. Emiliania huxleyi concentrations reached 4.5 × 10⁶ cells L^–1 by September, and the bloom persisted through the autumn. There was evidence for increased abundance of some species of copepods in 1997 as compared with data from the middle domain in June 1981. The abundance of adult and juvenile euphausiids in 1997 was statistically similar to values measured in 1980 and 1981. However, near-surface swarms were rarely observed on the inner shelf in August–September 1997. Lack of euphausiid availability in the upper water column may partially explain the August–September mass mortality of planktivorous short-tailed shearwaters ( Puffinus tenuirostris ) observed on the inner shelf.     

Identification of powdery-mildew-resistance genes in common wheat (Triticum aestivum L. em. Thell.). V. Old German cultivars and cultivars released in the former GDR

A total of 59 old wheat cultivars grown in Germany prior to 1960 were tested for mildew response using a collection of 12 differential isolates of Erysiphe graminis DC f. sp. tritici Marchal (Blumeria graminis (DC) Speer f. sp. tritici). Nineteen cultivars did not possess any major resistance gene and 25 were characterized by susceptible or intermediate responses. Fifteen cultivars revealed isolate-specific response patterns that could not be attributed to known major resistance genes or gene combinations. Many of the old German cultivars inherited a mildew-resistance gene from the Canadian cultivar ‘Garnet’ which is tentatively designated M1-Ga. Cultivars ‘Bretonischer Bartweizen’ (designated M1-Br) and ‘Adlungs Alemannen’ (designated M1-Ad) appeared to carry unknown resistance genes. Among 18 winter wheat cultivars released in the former GDR. eight showed susceptibility to all isolates used. Cv. “Borenos” carries resistance gene Pm3c. Five cultivars possess gene Pm4b. two cultivars gene pm5 and one cultivar a combination of genes Pm2 and Pm4b. Cultivar ‘Zentos’ was resistant to almost all isolates used. Its resistance might be conditioned by different unknown major resistance genes.     

Chromosome location of genes for resistance to powdery mildew in common wheat (Triticum aestivum L.) 1. Mlk and other alleles at the Pm3 locus

Summary Several wheat cultivars/lines were inoculated with isolates of Erysiphe graminis tritici to identify new genes/alleles for resistance. The wheats were tested with 13 isolates that had been characterized from responses on differential lines with known resistance genes. Gene Mlk which occurs in cultivars Kolibri, Syros, Ralle and several other European common wheats was found to be an allele at the Pm3 locus and is now designated Pm3d. The mildew resistance in an old Australian wheat, W150, is conferred by a single gene also allelic to Pm3 and now designated Pm3e. The near-isogenic line Michigan Amber/8^*Cc possesses another allele now designated Pm3f. A Syrian land variety of common wheat shows mildew resistance that is conditioned by the combination of genes Pm1 and Pm3a. Finally, two accessions of Triticum aestivum ssp. sphaerococcum appeared to possess the Pm3c allele.     

Identification of powdery-mildew-resistance genes in common wheat (Triticum aestivum L.). VI. Wheat cultivars grown in China

A total of 26 common wheat cultivars and advanced breeding lines grown in China were tested with a set of 11 differential powdery-mildew isolates. Seven cultivars were susceptible. Another seven cultivars showed the response pattern of resistance gene Pm2, either individually or in combination with genes Pm3d or Pm4a. Five cultivars expressed the resistance of gene Pm4b singly or in combination with Pm6. Another four cultivars exhibited the response patterns of genes Pm5, Pm6 and Pm8, respectively. Three cultivars, which included one breeding line with a pair of substituted chromosomes from Haynaldia villosa, presumably carrying the resistance gene Pm21, showed resistance-response patterns to all the isolates tested.     

Suitability of inorganic and organic amendments for in situ immobilization of Cd,Cu, and Zn in a strongly contaminated Kastanozem of the Mashavera valley,SE Georgia. I. Effect of amendments on metal mobility and microbial activity in soil

The aim was to find an adequate, cost‐efficient in situ remediation technique for the Mashavera valley, a mining area in SE Georgia heavily contaminated with Cd, Cu, and Zn. A 12‐month experiment was conducted to test: iron grit, natural zeolite, biochar, and Divergan® (a scavenger) for soil melioration. The amendments were added in different concentrations to the topsoil of a Kastanozem. Mobile metal concentrations decreased with increasing concentrations of amendments in the sequence Divergan® >> iron grit ≈ natural zeolite > biochar. In the same order amendments enhanced activities of soil microbial respiration, alkaline phosphatase, and dehydrogenase; microbial C also followed this trend. A sequential extraction confirmed a shift from easily mobilized to heavily bound fractions. The addition of 2% (w/w) of Divergan® was sufficient to lower mobile trace metal concentrations below German thresholds by chemisorption, and soil microbial activity was significantly increased. The effects of all other treatments were at a much lower level and not found suitable due to needed application rates.     

Physical properties of a Luvisol for different long‐term fertilization treatments: II. Microscale behavior and its relation to the mesoscale

We determined the impact of different fertilization, namely organic vs. mineral fertilization, on the mesoscale parameter cyclic compressibility as well as on rheology of soil samples as a microscale parameter and how these parameters are related. Therefore, undisturbed samples were taken from a long‐term fertilization trial at the Dikop farm near Bonn (Germany) and tested for their mechanical and hydraulic properties. This paper examines the sensitivity of the soil towards cyclic loading (mesoscale) and oscillatory shearing at the microscale by means of an amplitude sweep test and the resulting parameter maximum shear stress. Fertilization increased cyclic compressibility and thus revealed structural weakness of fertilized soil samples, so did shear stress at the microscale. The main reason for this was a decrease in bulk density in the wake of fertilization. However, within the range of fertilized soil samples, the soil structure became less susceptible towards cyclic loading and oscillatory shearing, respectively, the more organic matter the soil contained (equivalent to the fertilization level). This was assumedly caused by enhanced cementation due to organic substances that could partly substitute the direct grain–grain contacts generally contributing to soil strength. The similar behavior of cyclic compressibility and maximum shear stress enabled a first approach to relate soil mechanical parameters at the microscale to those at the mesoscale.     

Iron oxide mineralogy and stable iron isotope composition in a Gleysol with petrogleyic properties

Purpose  

Properties of Fe oxides are poorly understood in soils with fluctuating water tables and variable redox conditions. The objective of this research was to (a) characterize the mineralogical composition of Fe oxides and (b) determine the relationship to the stable Fe isotope ratio in a soil with temporally and spatially sharp redox gradients.     

Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana

The genomes of individuals from the same species vary in sequence as a result of different evolutionary processes. To examine the patterns of, and the forces shaping, sequence variation in Arabidopsis thaliana, we performed high-density array resequencing of 20 diverse strains (accessions). More than 1 million nonredundant single-nucleotide polymorphisms (SNPs) were identified at moderate false discovery rates (FDRs), and approximately 4% of the genome was identified as being highly dissimilar or deleted relative to the reference genome sequence. Patterns of polymorphism are highly nonrandom among gene families, with genes mediating interaction with the biotic environment having exceptional polymorphism levels. At the chromosomal scale, regional variation in polymorphism was readily apparent. A scan for recent selective sweeps revealed several candidate regions, including a notable example in which almost all variation was removed in a 500-kilobase window. Analyzing the polymorphisms we describe in larger sets of accessions will enable a detailed understanding of forces shaping population-wide sequence variation in A. thaliana.     

Whole-genome shotgun sequencing of mitochondria from ancient hair shafts

Although the application of sequencing-by-synthesis techniques to DNA extracted from bones has revolutionized the study of ancient DNA, it has been plagued by large fractions of contaminating environmental DNA. The genetic analyses of hair shafts could be a solution: We present 10 previously unexamined Siberian mammoth (Mammuthus primigenius) mitochondrial genomes, sequenced with up to 48-fold coverage. The observed levels of damage-derived sequencing errors were lower than those observed in previously published frozen bone samples, even though one of the specimens was >50,000 14C years old and another had been stored for 200 years at room temperature. The method therefore sets the stage for molecular-genetic analysis of museum collections.