Pinus contorta growth in northern Sweden as affected by soil scarification

The aim of this study was to quantify the effects of different soil scarification methods on tree growth. Soil scarification influenced stem volume and stem biomass yield of lodgepole pine (Pinus contorta Dougl. var. latifolia Engelm.) in a 17-year-old field trial in boreal Sweden. Soil scarification (disc trenching, mounding and ploughing) resulted in an average stem volume yield of 3.1 and 34.2 m³ ha^–1 on the poor and intermediate sites, respectively, while corresponding values for no soil scarification were 0.9 and 16.7 m³ ha^–1. In comparison to no scarification, ploughing increased volume yields by 500% on the poor site and by 200% on the intermediate sites. The ranking according to stem volume yield was ploughing > disc trenching = mounding no soil scarification. Averaged over the two sites, the mean annual increment of stem biomass was 219% and 145% higher (in d.w., 0.26 kg and 0.34 kg per sample tree) after ploughing compared with no soil scarification, for the average and dominant sample trees, respectively. Although not significant, the increased growth rate after soil scarification decreased the average stem basic wood density of the sample trees with 1.6% and 5.3%, at the poor and intermediate sites, respectively. In conclusion, soil scarification significantly increased the 17-year stem volume yield compared with no scarification. The results also indicate that the difference in stem biomass yield between ploughing and the other methods, especially no soil scarification, will increase even more in the near future.     

Molecular analysis of Salmonella enterica subsp. enterica serovar Agona isolated from slaughter pigs

Salmonella enterica subsp. enterica (S.) serovar Agona plays an important role in Brazil as causative agent of salmonellosis in food-producing animals - in particular, pigs and poultry - as well as in humans. A total of 45 S. Agona isolates collected from slaughter pigs at three different slaughterhouses in Southern Brazil was investigated in this study for their phenotypic and genotypic relatedness. For this, the antimicrobial susceptibility patterns and the phage types were determined. Molecular analysis included the determination of plasmid profiles as well as the analysis of XbaI- and BlnI-generated macro-restriction patterns. Moreover, a novel typing method called subtracted restriction fingerprinting (SRF) was successfully applied to the S. Agona isolates. Based on all properties determined, a dominant clonal group comprising 33 of the 45 isolates was identified. Members of this group were susceptible to all antimicrobials tested, did not carry plasmids, shared the same phage type and were closely related or even indistinguishable by their EcoRI-PauI SRF patterns as well as their XbaI and BlnI macro-restriction patterns. Members of this clonal group were identified at all 3 slaughterhouses at variable frequencies and originated from pig herds raised in 15 different cities in Southern Brazil which were located up to 450 km apart from each other. Since the S. Agona-carrying slaughter pigs were from various integrated production lines, the results of this study suggest that a specific clonal group of S. Agona had entered numerous pig production lines. This observation supports the requirement for the establishment of monitoring and control programmes in Brazil which should also include molecular techniques to better trace the dissemination of S. Agona and other Salmonella serovars in pigs and other food-producing animals.     

Characterization of a novel type of MLSB resistance plasmid from Staphylococcus saprophyticus carrying a constitutively expressed erm(C) gene

An erm(C)-carrying plasmid of unusual size and restriction map, designated pSES22, was identified in a Staphylococcus saprophyticus strain and sequenced completely. Constitutive expression of the erm(C) gene from pSES22 is based on a novel 22-bp tandem duplication in the erm(C) translational attenuator. Comparative analysis of the deduced Erm(C) amino acid sequence revealed that Erm(C) from pSES22 - together with an Erm(C) methylase from S. hyicus - represented a separate branch in the homology tree of Erm(C) methylases. Structural comparisons showed that plasmid pSES22 differed distinctly from all other completely sequenced erm(C)-carrying resistance plasmids. However, pSES22 was similar to several members of a diverse group of small plasmids, all of which carried closely related plasmid backbones consisting of the genes repU and pre/mob, but differed in their resistance genes.     

Perfused non-pregnant swine uteri: a model for evaluating transport mechanisms to the side bearing the dominant follicle in humans

Adequate uterine contractility and periovulatory peristalsis, interpreted as "rapid sperm transport" to the side bearing the dominant follicle, may be a precondition for successful reproduction in humans. Estrogen and progesterone fluctuate characteristically during the menstrual cycle, and their source is the dominant follicle and corpus luteum. The question is, how is the direction to the left or right side of transport mechanisms influenced? An extracorporeal perfusion model of the swine uterus was used that maintained the uterus in a functional condition and that was suitable for the study of physiological questions. The effects of side-dependent estrogen, progesterone, and estrogen plus progesterone perfusion on oxytocin-induced uterine peristalsis were assessed using two intrauterine microcatheters placed in each horn of the swine uterus. Estrogen perfusion was associated with an increase in intrauterine pressure (IUP) in a dose-dependent manner only in the estrogen-perfused horn of the swine uterus. There was a significant difference between the IUP increase measured in the estrogen-perfused horn and that in the non estrogen-perfused horn of the swine uterus. Progesterone perfusion showed no effect in general. Furthermore, progesterone antagonized the estrogen effects. This study demonstrates that side-dependent estrogen perfusion resulted in side-dependent contractility in the swine uterus perfusion system used. These observations show that estrogen stimulates uterine contractility in the estrogen-perfused uterine horn and that estrogens may be the "trigger" for the transport mechanisms to the side bearing the dominant follicle during the periovulatory phase through their locally increased concentration and distribution via the utero-ovarian counter-current system in humans.     

Functional and structural properties of 2S soy protein in relation to other molecular protein fractions

The purpose of this investigation is to develop a better understanding of the structure-function relationship of the 2S fraction of soy protein that has not been considered in earnest by the research community. Defatted soy flour was used to extract the three major fractions of the protein (2S, 7S, and 11S). It was found that 2S exhibits better foaming and emulsification properties than the other two molecular fractions. Work was extended to structural properties, which were monitored using spectrophotometry, atomic force microscopy, scanning electron microscopy, small-deformation dynamic oscillation on shear, and large-deformation compression testing. An experimental protocol utilizing glucono-delta-lactone (GDL), GDL with N-ethylmaleimide, or GDL with urea was capable of identifying the nature of molecular interactions responsible for gelation. Surprisingly, it was found that in the initial stages of structure formation, 2S fared better than 7S, with 11S exhibiting the highest rates of aggregation. Given time, however, 7S produced a firmer network with a better water-holding capacity than that of 2S. Non-covalent interactions, as opposed to disulfide bridging, were found to be largely responsible for the changing functionality of the molecular fractions throughout the experimentation from the formation of a vestigial structure to that of a mature gel.     

Authentication of the botanical and geographical origin of honey by front-face fluorescence spectroscopy

Front-face fluorescence spectroscopy, directly applied on honey samples, was used for the authentication of 11 unifloral and polyfloral honey types (n = 371 samples) previously classified using traditional methods such as chemical, pollen, and sensory analysis. Excitation spectra (220-400 nm) were recorded with the emission measured at 420 nm. In addition, emission spectra were recorded between 290 and 500 nm (excitation at 270 nm) as well as between 330 and 550 nm (excitation at 310 nm). A total of four different spectral data sets were considered for data analysis. Chemometric evaluation of the spectra included principal component analysis and linear discriminant analysis; the error rates of the discriminant models were calculated by using Bayes' theorem. They ranged from <0.1% (polyfloral and chestnut honeys) to 9.9% (fir honeydew honey) by using single spectral data sets and from <0.1% (metcalfa honeydew, polyfloral, and chestnut honeys) to 7.5% (lime honey) by combining two data sets. This study indicates that front-face fluorescence spectroscopy is a promising technique for the authentication of the botanical origin of honey and may also be useful for the determination of the geographical origin within the same unifloral honey type.     

Steroid hormone related male biased parasitism in chamois, Rupicapra rupicapra rupicapra

Parasites are linked with their host in a trophic interaction with implications for both hosts and parasites. Interaction stretches from the host's immune response to the structuring of communities and the evolution of biodiversity. As in many species sex determines life history strategy, response to parasites may be sex-specific. Males of vertebrate species tend to exhibit higher rates of parasites than females. Sex-associated hormones may influence immunocompetence and are hypothesised to lead to this bias. In a field study, we tested the prediction of male biased parasitism (MBP) in free ranging chamois (Rupicapra rupicapra rupicapra), which are infested intensely by gastrointestinal and lung helminths. We further investigated sex differences in faecal androgen (testosterone and epiandrosterone), cortisol and oestrogen metabolites using enzyme immunoassays (EIA) to evaluate the impact of these hormones on sex dependent parasite susceptibility. Non-invasive methods were used and the study was conducted throughout a year to detect seasonal patterns. Hormone levels and parasite counts varied significantly throughout the year. Male chamois had a higher output of gastrointestinal eggs and lungworm larvae when compared to females. The hypothesis of MBP originating in sex related hormone levels was confirmed for the elevated output of lungworm larvae, but not for the gastrointestinal nematodes. The faecal output of lungworm larvae was significantly correlated with androgen and cortisol metabolite levels. Our study shows that sex differences in steroid levels play an important role to explain MBP, although they alone cannot fully explain the phenomenon.     

Wind fields in heterogeneous conifer canopies: parameterisation of momentum absorption using high-resolution 3D vegetation scans

Applications of flow models to tall plant canopies are limited, amongst other factors, by the lack of detailed information on vegetation structure. A method is presented to record 3D vegetation structure and make this information applicable to the derivation of turbulence parameters suitable for flow models. The relationship between wind speed, drag coefficient (C _D ) and plant area density (PAD) was experimentally investigated in a mixed conifer forest in the lower part of the Eastern Ore Mountains. Essential information was gathered by collecting multi-level high-frequency wind velocity measurements and a dense 3D representation of the forest was obtained from terrestrial laser scanner data. Wind speed dependence or streamlining was observed for most of the wind directions. Edge effects, i.e. the influence of the here not regarded pressure gradient and the advective terms of the momentum equation, are assumed to cause this heterogeneity. Contrary to the hypothetic shelter effect, which would reduce the drag on sheltered plant parts, the calculated profiles of drag coefficients revealed an increasing C _D with PAD (i.e. a dependence on canopy and plant structure).     

Carbon loads, forms and sequestration potential within ash deposits produced by wildfire: new insights from the 2009 ‘Black Saturday’ fires, Australia

Forest fires release substantial amounts of carbon (C). Much of it is emitted to the atmosphere, but some is deposited within ash on the ground. Little is known about amount and types of C deposited in ash. Here, we quantify total C, and total inorganic, water-soluble and particulate organic fractions deposited in ash during the catastrophic 2009 ‘Black Saturday’ wildfires in Australia. These fires coincided with the highest air temperatures and lowest humidity ever recorded in the local area, which, combined with high fuel loads of mostly long unburnt eucalypt forests, generated extreme burning conditions. In three mixed-species eucalypt forest sites sampled, the canopy, understorey and litter fuels were almost completely consumed, resulting in substantial ash deposition (mean, 81.9 t ha^?1), with 5.9 t ha^?1 of C being transferred from vegetation to the forest floor. In five temperate rainforest sites sampled, the canopy was not burnt and ash deposition was lower (mean, 48.3 t ha^?1) than in the mixed-species eucalypt forest, but overall their higher C content resulted in higher C deposition (8.1 t ha^?1). In all cases, most C contained in ash was organic and its pyrogenic nature infers increased resistance to degradation. Pyrogenic C is viewed by many as an important C sink, which could contribute to long-term C sequestration when incorporated into soils or sediments. Our results highlight the potential importance of the pyrogenic C pool in freshly deposited ash and, therefore, the necessity of a systematic and detailed analysis of ash deposition and C forms in ash to improve our understanding of C fluxes by forest fires.