Characteristic upregulation of glucose-regulated protein 78 in an early lesion negative for hitherto established cytochemical markers in rat hepatocarcinogenesis

Previously, we reported α(2)-macroglobulin (α(2)M) to be a novel marker characteristic of rat hepatocellular preneoplastic and neoplastic lesions negative for hitherto well-established markers. In the present study, we further examined other candidate markers with specificity for the same type of lesions. Glutathione S-transferase-placental form (GST-P)-negative hepatocellular altered foci (HAF) were generated using a two-stage (initiation and promotion) carcinogenesis protocol with N,N-diethylnitrosamine (DEN) and either Wy-14,643 or clofibrate, two peroxisome proliferators. Microarray analysis using total RNAs isolated from laser-microdissected GST-P-negative HAF (amphophilic cell foci) and adjacent normal tissues was conducted along with immunohistochemistry and real-time RT-PCR. Staining for glucose-regulated protein 78 (GRP78) was detected in GST-P-negative HAF and hepatocellular adenomas, and slightly increased GRP78 mRNA expression was observed in the lesions by real-time RT-PCR analysis. Thus, an early increase of GRP78 expression in hepatocarcinogenesis is likely a feature of the amphophilic subset of HAF.     

Rediscovery of Indian dwarf wheat (Triticum aestivum L. ssp. sphaerococcum (Perc.) MK.) an ancient crop of the Indian subcontinent

Indian dwarf wheat (Triticum aestivum L. ssp. sphaerococcum (Perc.) Mac Key, synonym: T. sphaerococcum Perc.) is endemic to southern Pakistan and northwestern India. It was one of the main winter crops grown by ancient Indian cultures. However, it disappeared from the record during the early twentieth century, especially after the Green Revolution brought modern wheat varieties into India and Pakistan. Whether or not Indian dwarf wheat is presently cultivated has been unclear. Here we report on the rediscovery of the cultivation of this wheat in northern Karnataka and southern Maharashtra in India. Molecular genetic analysis of the chloroplast DNA of the two specimens collected at location 3 revealed that both samples have a unique haplotype that is specific to Indian dwarf wheat. We found this wheat at three locations in 2010, but at only one of the three locations in 2011. Therefore, the future survival of this subspecies is uncertain. Further ethnobotanical research is urgently needed to conserve this unique genetic resource for the future.     

Crystalline clay minerals of the soils derived from recent volcanic ashes in Hokkaido,Japan

For the past ten years much work has been carried out on clay minerals of volcanic ash soils. Most investigators have reported that allophane is dominant among clay minerals of volcanic ash soils and crystallizes to halloysite or meta-halloysite with the advance of weathering (1–8). On the other hand, UCHIYAMA, MASUI and ONIKURA (1960) found that montmorillonite predominates in the clay fraction of volcanic ash soil in Kawatabi (9). Furthermore, MASUI, SHOJI and UCHIYAMA (1966) showed that the major crystalline clay minerals of volcanic ash soils in the Tohoku district are montmorillonite, vermiculite, intergradient montmorillonite-vermiculite and chlorite (10). They also showed that these minerals increase with the advance of weathering and that kaolin minerals are minor constituents.     

Occurrence of laminar opaline silica in some Oregon Andosols

Laminar opaline silica was first found in the 0.2 to 5 μ fraction and most abundant in the 0.4 to 2 μ fractions of young Japanese Andosols by Shoji and Masui (1969a, b). It was noted that the A horizon of a profile tends to be relatively rich in opaline silica whereas the B or C horizon, in allophane (Shoji and Masui, 1972a, b). They (I972a) distinguished four types of opaline silica particles such as circular, elliptical, rectangular, and rhombic, of which the circular and elliptical types predominate. It has been suggested that the formation of opaline silica is favored by a plentiful supply of soluble silica in the early weathering stage of Andosols, the supersaturation of silica by surface evaporation of soil solution, and the suppression of aluminum activity in the soil solution by the accumulation of soil organic matter (Shoji and Masui, 1972b; Wada and Harward, 1974). The purpose of the present short communication is to describe the occurrence of laminar opaline silica particles in some Oregon Andosols, U.S.A.     

Influence of wood species on the sawdust-based cultivation ofPleurotus abalonus andPleurotus eryngii

Mycelial growth and fruit body formation ofPleurotus abalonus andP. eryngii cultured on various sawdust-based substrates from different wood species were investigated. Growth onCryptomeria japonica substrate resulted in good mycelial growth and a high yield of fruit bodies.Larix kaempferi substrate was unsuitable for the cultivation of these mushrooms. The fruit body formation rate correlated with mycelial growth from all the wood species tested. Although differences were found for mycelial growth and fruit body formation on various wood species, there were no wood species that were completely unsuitable exceptL. kaempferi. These results show that a wide range of wood species can be used for the cultivation ofP. abalonus andP. eryngii.     

Identification of Ligands for Chicken Transient Receptor Potential Ankyrin 1 Channel and Chemosensory Perception of Herbal Compounds in Chickens

The pungency induced by spices and herbs plays an important role in food choice and appetite, and it is suggested that adding spices and herbs to feed as natural alternatives to antibiotics has beneficial effects in poultry farming. However, our knowledge of the chemosensory perception of herbal compounds in chickens is limited. Transient receptor potential ankyrin 1 (TRPA1) is involved in the sensory perception of various herbal compounds. Here, we performed calcium imaging and electrophysiological analyses using cells transiently expressing chicken TRPA1 (cTRPA1) and identified two novel cTRPA1 ligands—eugenol and thymol. In a behavioral assay, chickens responded to cTRPA1 ligands, including eugenol, thymol, cinnamaldehyde, carvacrol, and allyl isothiocyanate. These results provide evidence that chickens have a functional TRPA1 channel and chemosensory perception of various herbal compounds.     

Influence of osmotic pressure on somatic embryo maturation in Pinus densiflora

The effect of an osmoticum, polyethylene glycol (PEG), on somatic embryo production was examined using embryogenic cells of Pinus densiflora. In the basal medium containing 30 μM abscisic acid and 6% maltose, the quality of the embryos formed was poor even though somatic embryos were produced. The addition of PEG with molecular weight of 4000 or 8000 significantly enhanced the development of both the quality and quantity of somatic embryos. Furthermore, higher levels of a constant osmotic pressure with PEG 8000 in a range from about 300 to 450 mmol/kg could remarkably enhance the morphogenesis of somatic embryos and their number of embryos produced. A higher stable osmotic pressure with an appropriate molecular weight of PEG is a key factor for the production of good quality somatic embryos in P. densiflora.     

The impact of forest clear-cutting on soil temperature: a comparison between before and after cutting,and between clear-cut and control sites

Soil temperature is one of the most important factors governing biological activity in the soil. This study was conducted to investigate how forest clear-cutting changes soil temperature. Soil temperatures at 0.5, 1.0, 2.0, and 3.0m depths were measured in two neighboring forest watersheds (35°12N, 140°06E) in Chiba Prefecture, Japan, from 1994 to 2000. One watershed was clear-cut 5 years after the observations began. After clear-cutting, the annual mean soil temperature at 0.5, 1.0, 2.0, and 3.0m depths rose by about 2.2, 2.0, 1.7, and 1.4°C, respectively. The maximum respective soil temperatures rose by about 3.2, 3.0, 2.2, and 1.8°C. The minimum soil temperature rose slightly (1°C). The range of temperatures increased by 3.0, 2.4, 1.6, and 1.4°C, respectively. In our study, forest clear-cutting raised maximum and average soil temperatures but hardly changed minimum soil temperature. This is probably because solar radiation dominated in the summer season and increased soil temperature; on the other hand, net long-wave radiation, and releases of latent and sensible heat from the soil surface, were predominant in the cool season.     

Relationships between soil CO2 concentration and CO2 production, temperature, water content, and gas diffusivity: implications for field studies through sensitivity analyses

Soil CO₂ levels reflect CO₂ production and transport in soil and provide valuable information about soil CO₂ dynamics. However, extracting information from soil CO₂ profiles is often difficult because of the complexity of these profiles. In this study, we constructed a simple numerical model that simulated soil CO₂ dynamics and performed sensitivity analyses for CO₂ production rates, soil water content and temperature, and gas diffusivity at the soil surface to clarify the relationships among these parameters. Increased soil surface CO₂ flux did not always coincide with higher soil CO₂ concentrations; increased CO₂ production at shallow depths had little effect on soil CO₂ concentrations, while the opposite may be true for high levels of soil water content. Higher soil CO₂ concentration did not always coincide with greater soil surface CO₂ flux; under high soil water conditions, soil surface CO₂ flux sometimes decreased despite increased soil CO₂ concentration. Increases in soil water content did not always enhance both soil surface CO₂ flux and soil CO₂ concentration. Under high soil water conditions, increases in soil water content could lower soil surface CO₂ flux and increase soil CO₂ concentration. Increases in soil temperature resulted in greater soil surface CO₂ flux and higher soil CO₂ concentration in our simulation (extremely high temperatures were not assumed in this study). Gas diffusivity in very shallow layers did affect, albeit weakly, soil CO₂ concentration. The findings of this study may help direct future observations and aid in the interpretation of their results.