Genetic Diversity in Argentine Andean Potatoes by Means of Functional Markers

Andean Potato is a major crop for farmers in the Andes and represents an important gene pool for potato improvement. We present the population structure and genetic diversity of 88 Andigena accessions collected in Northwestern Argentina based on functional markers (25 SSR) distributed along 12 chromosomes. Polymorphic information content ranged from 0.40 to 0.87. A Bayesian approach, a Principal Coordinate Analysis and a Cluster Analysis revealed the presence of: I) a major group containing most of the Andean accessions and II) a smaller group including the out-group cv. Spunta and the sequenced genotype DM. Several group specific alleles were detected. AMOVA showed that 81% of the variability was within each group. Eleven of the SSRs analyzed are linked or within genes reported to regulate traits of nutritional and industrial interest. Additionally, the allelic variant of a photoperiod dependent tuberization regulator gene, StCDF1.2, was exclusively detected in accessions clustered in group II.     

Wood Use and Forest Management for Carbon Sequestration in Community Forestry in Sierra Juárez,Mexico

Forest managers and policy-makers are being encouraged to incorporate carbon sequestration as a criterion for decision-making. This is a great challenge for small-scale forestry where the conspicuous lack of practical knowledge available for managers prevents the implementation of criteria to promote carbon sequestration. The carbon simulation model CO2FIX combined with local data could provide valuable information for C sequestration in these small-scale forestry systems. The research reported here focuses on community forestry located in the Juarez Mountain Range (Oaxaca State, Mexico), and analyzes the influences of forest management and wood-use (20 scenarios based on five forest management plans and four wood-use strategies) on the changes of C stock (biomass C, soil organic C, products C and fuelwood C) over time. The comparison of the whole stocks to reference results show that group-selection, based on an uneven-aged forest management system involving small patches, has only about half the C benefit relative to clear-cutting harvesting. A forest management strategy focused on oak logwood has a lower C benefit (70 %), and a forest management strategy focused on oak fuelwood has a higher C benefit (120 %) relative to the average of the studied wood-use strategies. Thus, in the study area forest managers and policy-makers who wish to mitigate climate change should increase the rotation period from 40 to 50 years in clear-cutting areas, continue with 40 years in group-selection areas, and promote the use of oak for bioenergy.     

Financial risk analysis of three aeration regimes in catfish cage culture

Abstract

This study analysed the benefits and costs of three airlift aeration regimes — continuous (24 hr), partial (9 hr/night plus emergencies), and no aeration — for channel catfish in cages. Data from four field studies included four dependent variables based on size at harvest, and six independent variables. Four regression models were fit with a modified Cobb‐Douglas production function in a Seemingly Unrelated Regression system. Yield projections from the production function were then used in a stochastic economic model with prices and variable costs expressed as triangular distributions. Results indicated that none of the aeration methods was preferred to the others by either first‐ or second‐degree stochastic dominance criteria, although partial aeration was the risk‐neutral choice. A power analysis was used to demonstrate that an impractical number of replicates would be needed to detect a difference between partial and continuous aeration that was both economically and statistically significant.     

Comparison of tree architecture using tree edit distances: application to 2-year-old apple hybrids

In fruit trees, understanding genetic determinisms of architectural traits is considered as a promising manner to control vegetative development and yield regularity. In this context, our study aimed to classify 2-year-old apple hybrids on the basis of their architectural traits. From a fine phenotyping, trees were described as tree graphs, including topological and geometric information. To evaluate the similarity between trees, comparison methods based on edit operations (substitution, insertion and deletion) were carried out. Distance between two tree graphs was computed by minimising the sum of the costs of the edit operations applied to transform one tree into another. Two algorithms for the comparison of unordered and partially ordered tree graphs were applied to a sub-sample of the population, taking into account several geometric attributes. For each comparison, a dissimilarity matrix was computed, and subsequently trees were clustered. A local interpretation of the matched entities was proposed through schematic representations of the trees, and similarities between trees were analysed within and between clusters. The tree graphs, both unordered or partially ordered and whether the attributes were considered or not, were grouped, by clustering, according to the number of entities per tree. The robustness of the unordered comparison was demonstrated by its application to the whole population, since it provided results similar to those obtained on the sub-sample. Further developments towards a higher relative weight of geometric versus topological information are discussed in the perspective to define an architectural ideotype in apple.     

Forest-related partnerships in Brazilian Amazonia: There is more to sustainable forest management than reduced impact logging

There is more to sustainable forest management than reduced impact logging. Partnerships between multiple actors are needed in order to create the institutional context for good forest governance and sustainable forest management and stimulate the necessary local community involvement. The idea behind this is that the parties would be able to achieve more jointly than on their own by combining assets, knowledge, skills and political power of actors at different levels of scale. This article aims to demonstrate by example the nature and variety of forest-related partnerships in Brazilian Amazonia. Based on the lessons learned from these cases and the authors’ experience, the principal characteristics of successful partnerships are described, with a focus on political and socioeconomic aspects. These characteristics include fairly negotiated partnership objectives, the active involvement of the public sector as well as impartial brokers, equitable and cost-effective institutional arrangements, sufficient and equitably shared benefits for all the parties involved, addressing socioeconomic drawbacks, and taking measures to maintain sustainable exploitation levels. The authors argue that, in addition to product-oriented partnerships which focus on sustainable forest management, there is also a need for politically oriented partnerships based on civil society coalitions. The watchdog function of these politically oriented partnerships, their awareness-raising campaigns regarding detrimental policies and practices, and advocacy for good forest governance are essential for the creation of the appropriate legal and political framework for sustainable forest management.     

Disturbance from roads negatively affects Andean condor habitat use

Human disturbance can be a severe problem for some animal species. Behavioural ecology theory predicts that sensitivity to mortality risks, and thereby to disturbance, will be related to life-history characteristics. Long-lived species with low reproductive rates are expected to have a high cost of predation and therefore avoid risks strongly. In this paper we quantify the effect of roads on the Andean condor (Vultur gryphus) using behavioural indicators. We used a pair wise design, offering condors standardized food patches near and far from roads simultaneously. The patches consisted of dead adult sheep. We recorded condors’ behaviour when visiting each patch. This study establishes the versatility of behavioural indicators and their usefulness to study conservation problems. We found that, although near and far patches were discovered after similar times and there were similar numbers of condors in the vicinity of near and far patches, the use of patches differed strongly. In the patches far from roads many more condors came to feed, the average time spent per individual was longer, the proportion of time spent vigilant was lower, and the amount of food left uneaten on the carcasses was lower. These results strongly suggest that Andean condors clearly avoid roads, and behave in a way predicted from theory if they trade off safety for energy. This study shows that roads have stronger influence on the habitat use of Andean condors, than previously thought, and may be a significant problem for the species in populated areas.     

Pollution Bioindicators: Statistical Analysis of a Case Study

In this paper a three-step procedure is proposed to deal with ecological data, usually very complex in their treatment. The three steps – exploratory, confirmatory, and modelling phases – reflect the different methodological approaches necessary in each phase of the study. To illustrate the methodology, a case study is proposed, concerning the suitability of plants as pollution bioindicators. Samples of differently aged Pinus pinea L. needles were collected throughout 1 year in three different locations, whose human disturbance was known to be different. In the samples some morphological and functional parameters were measured, whose relation with the stress was already known. The exploratory analysis suggested pollution with human origin, the needle’s age, and the environmental conditions as the main factors of influence of damage. The confirmatory analysis confirmed both site and age as main factors and occasionally the sampling date. On this basis, some models were estimated separately for each site: models that best described the damage as function of age resulted non-linear and some of them with seasonal fluctuations. As a result, whereas the models described well enough the pollution temporal variation, the difference of pollution in the sites was best described by the different values of the models parameters in the different sites. In short, different pollution conditions are described better by the damage trend than by the individual measures. The three-step procedure resulted of high utility in outlining the most interesting relations to investigate through the modelling, the opportunity to model the indicators variation along time separately for each site, and to introduce the seasonal variation in some models.     

Nutritional changes in petiole sap over space and time in a tomato crop greenhouse

The aims of this trial were to determine the spatial and temporal variability of the nutrients in petiole sap in a tomato crop under greenhouse and to determine the number of sub-samples for a representative sample. The experiment consisted of the selection of 20 sampling points. Petiole of fully expanded leaf was collected weekly in order to determine Cl, NO₃-N, H₂PO₄-P, SO₄-S, Na, K, Ca and Mg concentrations. Our results showed that variations of NO₃-N, Na, Ca and K concentrations in sap were affected by the spatial distribution, whereas SO₄-S and Mg concentrations in sap were affected by their temporal distribution. The spatial variability of our experiment could be related to radiation, yield and antagonism between nutrients, whereas the time variability could be related to the phenological stage of the plant and the antagonism between nutrients. The suggested number of petiole sub-sample ranging from 25 to 113 depending on nutrient.     

Mapping within-field variability in wheat yield and biomass using remote sensing vegetation indices

Precision Agriculture - This paper explored the ability of remote sensing (RS) and meteorological data to map the variability of yield/biomass in cultivated wheat (Triticum aestivum). The...