Identification and characterization of a serine protease from wheat leaves

A putative serine protease with a potential role in the plant biotic and abiotic stress response was purified from wheat leaf apoplastic fluid and partially characterized. Following two-dimensional electrophoresis a protein of M_r = 75 k and a pI of 4.2 to 4.5 was observed. This protein displayed in-gel protease activity and was specifically inhibited by phenylmethanesulfonyl fluoride and partially inhibited by Ca²⁺ and Zn²⁺, but not by E-64 or leupeptin. An internal tryptic fragment of 13 amino acids was identified by MALDI QqTOF MS/MS, and this peptide showed a high level of homology (85–100 % identity) to a highly conserved region of known plant subtilisin-like proteases. We demonstrated that the protease activity increased until a late stage of wheat leaf development and increased in response to heat shock. In both cases Rubisco large subunit was degraded with time. Protease activity was also increased during biotic stress. Leaves challenged with leaf rust (Puccinia triticina), showed an approximately three fold increase in protease activity during an incompatible interaction, compared to activity in mock-inoculated leaves and to leaves in a compatible leaf rust interaction. These results suggest that the expression of this serine protease could be involved in the defense response against both abiotic and biotic stresses.     

A case study of <Emphasis Type="Italic">Eucalyptus globulus</Emphasis> fingerprinting for breeding

• Introduction  

Tree genetic improvement programs usually lack, in general, pedigree information. Since molecular markers can be used to estimate the level of genetic similarity between individuals, we genotyped a sample of a Portuguese Eucalyptus globulus breeding population—a reference population of 125 individuals—with 16 microsatellites (SSR).     

The North American long-term soil productivity experiment: Findings from the first decade of research

First decade findings on the impacts of organic matter removal and soil compaction are reported for the 26 oldest installations in the nation-wide network of long-term soil productivity sites. Complete removal of surface organic matter led to declines in soil C concentration to 20 cm depth and to reduced nutrient availability. The effect is attributed mainly to the loss of the forest floor. Soil C storage seemed undiminished, but could be explained by bulk density changes following disturbance and to decomposition inputs of organic C from roots remaining from the harvested forest. Biomass removal during harvesting had no influence on forest growth through 10 years. Soil compaction effects depended upon initial bulk density. Soils with densities greater than 1.4 Mg m⁻³ resisted compaction. Density recovery was slow, particularly on soils with frigid temperature regimes. Forest productivity response to soil compaction depended both on soil texture and the degree of understory competition. Production declined on compacted clay soils, increased on sands, and generally was unaffected if an understory was absent.     

Dynamic interfacial rheology as a tool for the characterization of whey protein isolates gelation at the oil-water interface.

Heat-induced interfacial aggregation of a whey protein isolate (WPI), previously adsorbed at the oil-water interface, was studied by interfacial dynamic characteristics coupled with microscopic observation and image analysis of the drop after heat treatment. The experiments were carried out at temperatures ranging from 20 to 80 degrees C with different thermal regimes. During the heating period, competition exists between the effect of temperature on the film fluidity and the increase in mechanical properties associated with the interfacial gelation process. During the isothermal treatment, the surface dilational modulus, E, increases, and the phase angle, delta, decreases with time to a plateau value. The frequency dependence of E and delta is characteristic of viscoelastic films with increasing delta and decreasing E at lower frequencies. The effects of heat treatment depend on the conditions at which the gelation process takes place. Microscopic observation of gelled films gives complementary information on the effect of heat treatment on WPI adsorbed films.     

Variation in baobab (Adansonia digitata L.) leaf morphology and its relation to drought tolerance

The baobab tree (Adansonia digitata L.) is a valued savannah tree. Although variation in fruit characteristics of this tree have been studied, no studies to our knowledge have been carried out on variation of leaf morphology which can be linked to drought adaptation mechanisms. Accessions of baobab from different ecosystems in Benin were characterised for leaf size and thickness, stomata size and density on the abaxial surface of leaves. Significant variation was found in leaf size and stomata characteristics. Trees from northern study sites had higher stomata density and smaller guard cell length than those from southern study sites. The results show that pruning has a significant effect on leaf size, but not on stomatal characteristics. Trees from northern study sites showed more xerophytic characteristics than those from the south. It seems that genetic and physiological effects may play a role in baobab drought adaptation.     

Chromosomal localization of five mutant genes in rice, Oryza sativa, using primary trisomics

The chromosomal locations of five mutant genes in rice were determined by crossing the marker stocks with the 12 primary trisomics. Genetic segregation of each gene was studied in the F₂ or backcross populations. Out of the 60 possible cross combinations, 43 F₂ or BC₁ populations were studied. Segregation data indicated that spl11 was located on chromosome 12 while wp2 and eg2_(t) were located on chromosome 6. The genes v12_(t) and Bc₆ were located on chromosomes 8 and 9, respectively, which are sparsely populated with genetic markers.     

Rapid and high-precision marker assisted backcrossing to introgress the <Emphasis Type="Italic">SUB1</Emphasis> QTL into BR11, the rainfed lowland rice mega variety of Bangladesh

Flooding is one of the major hazards of rice production for the rainfed lowland rice ecosystem, and tolerant cultivars are urgently needed to help protect farmers from submergence damage. A quick and efficient strategy was implemented to introgress SUB1, a major QTL for submergence tolerance, into a rainfed lowland mega variety BR11 of Bangladesh by only two backcrosses and one selfing generation. In marker-assisted backcrossing (MABC), one tightly-linked simple sequence repeat (SSR) and two gene-based markers, four flanking SSR and 116 background SSR markers were used for foreground, recombinant and background selection, respectively, in backcrosses between a SUB1 donor IR40931-33-1-3-2 and BR11. BR11-Sub1, identified in a BC₂F₂ plant, possessed BR11 type SSR alleles on all fragments analyzed except the SUB1 QTL. The introgression size in BR11-Sub1 was 800 Kb indicating approximately 99.8% identity to BR11. BR11-Sub1 along with other introgression lines showed submergence tolerance similar to the tolerant parent. Yield, yield-component parameters and grain physico-chemical properties showed successful recovery of the BR11 traits in BR11-Sub1, with yield potential ranging from 5.2 to 5.6 t/ha, not significantly different from the recurrent parent mega variety BR11. Producing a large number (~1000) of backcross F₁ plants was considered essential to achieve recombination on both sides of the gene, limiting linkage drag with only two backcrosses. A large number of background markers ensured proper recovery of the recurrent parent genome in the BC₂F₂ generation. The study demonstrates a rapid and highly precise strategy to introgress a major QTL by BC₂F₂ generation into a modern rice variety using an unadapted donor. The variety can replace BR11 on more than 2 million of ha in Bangladesh and provide major increases in rice production.     

Infrared Thermal Imaging as a Rapid Tool for Identifying Water‐Stress Tolerant Maize Genotypes of Different Phenology

The main task of this research was to evaluate canopy temperature and Crop Water Stress Index (CWSI) by assessing genotype variability of maize performance for different water regimes. To that end, three hundred tropical and subtropical maize hybrids with different phenology in terms of date of anthesis were evaluated. The influence of phenology on the change in canopy temperatures and CWSI was not equal during the three dates of measurement. At the end of vegetative growth (82 days after sowing, DAS) and at the blister stage (DAS 97), a high significant difference in temperatures and CWSI (P < 0.001) were obtained between the early‐ and late‐maturity genotypes. During anthesis (DAS 89), phenology had a significant effect (P < 0.01) only for the well‐watered genotypes, while under water‐stress conditions, no differences were found between early and late genotypes in terms of canopy temperature and CWSI. High significant differences (P < 0.001) in stomatal conductance (g_s) between early and late genotypes for different treatments were observed. A relationship (R² = 0.62) between g_s and canopy temperature was obtained. Under a water‐stress canopy, temperature was measured at anthesis, which was negatively correlated with grain yield of the early (r = ?0.55)‐ and late (r = ?0.46)‐maturity genotypes in the water‐stressed condition.     

Geographical patterns of phenotypic diversity in <Emphasis Type="Italic">Oryza sativa</Emphasis> landraces of Côte d’Ivoire

The knowledge of agro-morphological diversity and the distribution pattern of variation among conserved accessions could be an invaluable aid in germplasm management and crop improvement strategies. In this study, the geographical pattern of morphological variation of 880 landrace rice (Oryza sativa (L.)) accessions in Côte d’Ivoire was evaluated for 13 agro-morphological characters. Shannon –weaver diversity index indicated an overall mean of 0.47 ± 0.07 in the collection, with the greatest diversity from derived Savanna and north-west (H′ = 0.52 and 0.50) while the west-central had the lowest diversity (H′ = 0.41). Canonical discriminant analysis showed that traits such as panicle length, grain size (weight and length), tillering ability, number of days to heading and maturity were the main discriminatory characteristics. Result of the phenotypic frequency shows that, the landraces from the north and north-western zones were mostly tall, early heading and maturity, compared to those from the west and west-central which were mainly dwarf to medium height, late heading and maturing. This differential distribution of landraces with height, heading and maturity period reflected the distribution pattern of different Oryza sativa landraces in Côte d’Ivoire, which could be useful in germplasm management and breeding programs.