Chondrulelike objects in short-period comet 81P/Wild 2

The Stardust spacecraft returned cometary samples that contain crystalline material, but the origin of the material is not yet well understood. We found four crystalline particles from comet 81P/Wild 2 that were apparently formed by flash-melting at a high temperature and are texturally, mineralogically, and compositionally similar to chondrules. Chondrules are submillimeter particles that dominate chondrites and are believed to have formed in the inner solar nebula. The comet particles show oxygen isotope compositions similar to chondrules in carbonaceous chondrites that compose the middle-to-outer asteroid belt. The presence of the chondrulelike objects in the comet suggests that chondrules have been transported out to the cold outer solar nebula and spread widely over the early solar system.     

Genotyping‐by‐sequencing for construction of a new genetic linkage map and QTL analysis of growth‐related traits in Pacific bluefin tuna

Pacific bluefin tuna (Thunnus orientalis) has high market value, but its wild populations have decreased in recent years. The broodstock of Pacific bluefin tuna that were hatched artificially and reared under aquaculture conditions is beginning to be used for production. The creation of broodstock with commercially valuable traits, such as rapid growth, is therefore of great interest. Genetic linkage map‐based identification of markers associated with quantitative trait loci (QTLs) facilitates marker‐assisted selection (MAS) breeding and allows efficient genetic improvement of broodstock. Single nucleotide polymorphism (SNP)‐based genetic linkage map construction using the genotyping‐by‐sequencing method can expand the number of mapped markers and help identify growth‐related QTLs. In this study, we constructed sex‐specific maps for 24 linkage groups consisting of 677 SNP and 651 microsatellite markers. The total lengths of 93 progenies in the mapping population followed normal distribution, with an average length of 9.4 mm. We performed composite interval mapping in the mapping population. QTL analysis revealed one significant QTL in LG10 on the female linkage map. The genetic linkage map—the second such map generated for Pacific bluefin tuna—and the growth‐related QTLs detected in this study will be useful for tuna aquaculture MAS programs.     

Cellulose digestion by common Japanese freshwater clam Corbicula japonica

ABSTRACT:   Cellulose digestion by Corbicula japonica was investigated according to the hypothesis that without any symbiotic aid, this organism can utilize cellulose as a carbon source. Enzymatic studies revealed the complete cellulase activity of this species, and molecular cloning resulted in the isolation of cDNA with an ORF encoding a 596-amino-acid protein that shares significant homology with abalone and termite cellulases with an amino acid identity of 52.2% and 50.5%, respectively. The isolated cellulase had a carbohydrate-binding module at the N-terminal region that was also reportedly present in abalone cellulase, and its mRNA were specifically expressed in the digestive gland. These findings strongly support the assumption that C. japonica has an endogenous cellulose, as well as abalones and termites. It is further believed that C. japonica plays an important roll in decomposing cellulose, and consequently contributes to the carbon-cycle in the aquatic environment, as termites do in terrestrial forests.     

Terrestrial prey inputs to streams bordered by deciduous broadleaved forests,conifer plantations and clear‐cut sites in southwestern Japan: effects on the abundance of red‐spotted masu salmon

Terrestrial invertebrates falling from the riparian canopy are a major energy source for fishes in headwater streams. Because quantity and quality of such allochthonous resources can vary depending on riparian conditions, conversion of riparian forests to conifer plantations may affect stream productivity. We compared falling and drifting invertebrate abundances and the diet of masu salmon (Oncorhynchus masou) among stream reaches bordered by deciduous broadleaved forests, conifer plantations (Cryptomeria japonica), and clear‐cut sites in southwestern Japan. We also examined whether among‐reach variation in salmon abundance was related to the riparian vegetation types. The results indicated that, on an annual basis, falling inputs of terrestrial invertebrates at the broadleaved reaches were 2–4 times higher than those at the plantation and clear‐cut reaches. In nonwinter seasons, terrestrial invertebrates made up 40–60% and 30–90% of drift and masu salmon diets, respectively, and drifting invertebrate abundance was higher in the broadleaved reaches than in the plantation reaches. Furthermore, a multivariate analysis of salmon abundance showed that variation in salmon biomass was explained primarily by riparian vegetation type, with broadleaved and clear‐cut reaches having higher biomass than the plantation reaches. These results indicate that terrestrial invertebrates are an important resource for masu salmon, and suggest that streams bordered by conifer plantations receive lower terrestrial prey inputs, which results in lower salmon abundance. In regions where natural forests have been extensively converted to conifer plantations, forest management that allows and facilitates recovery of natural riparian stands is important.     

The discovery of pyridalyl: a novel insecticidal agent for controlling lepidopterous pests

Synthesis of analogues of two compounds with known insecticidal activity, both of which contain a 3,3-dichloro-2-propenyloxy group, produced 2-(trifluoromethyl)-4-phenoxyphenyl 3,3-dichloro-2-propenyl ether, which had weak activity against lepidopterous larvae. Structural modifications around this lead compound led to the development of pyridalyl [Pleo, S-1812; 2,6-dichloro-4-(3,3-dichloroallyloxy)phenyl 3-[5-(trifluoromethyl)-2-pyridyloxy]propyl ether], which belongs to a new class of insecticides. Pyridalyl gives very good control of various lepidopterous and thysanopterous pests on cotton and vegetables, without phytotoxicity. It controls populations of Heliothis virescens F and Plutella xylostella (L) which are resistant to various currently used insecticides. It also produces unique insecticidal symptoms, so it may have a different mode of action from other existing insecticides. Pyridalyl is also less harmful than existing insecticides to various beneficial arthropods, so it should provide an important tool in IPM and insecticidal management programmes for the control of lepidopterous and thysanopterous pests. The first market introduction is expected in Japan and some Asian countries in the years between 2004 and 2005.     

Effects of livestock grazing on the spatial heterogeneity of net soil nitrogen mineralization in three types of Mongolian grasslands

Purpose

Small-scale soil heterogeneity relates to productivity and biodiversity and is crucial to understand. Soil heterogeneity could be affected by vegetation structure, and large mammal grazers could modify it through herbivory and excretion. The objective is to clarify the effects of livestock grazing on the small-scale (～3 m) soil heterogeneity in three types of Mongolian grasslands.

Materials and methods

We sampled soils from inside (ungrazed) and outside (grazed) exclosures in three vegetation types: forest-steppe, shrub-steppe, and desert-steppe. We measured laboratory rates of soil net nitrogen (N) mineralization and net nitrification and geostatistically analyzed heterogeneity.

Results and discussion

Average rates of net N mineralization and net nitrification were lower at shrub-steppe and desert-steppe and were decreased by grazing. Semivariograms showed vegetation-induced heterogeneity in ungrazed plots, except for net nitrification at forest-steppe. We found linear change with distance under dense and uniform vegetation at forest-steppe, 1.3 m patch under patchy vegetation at shrub-steppe, and linear change, but with much smaller semivariance, under sparse and poor vegetation at desert-steppe. At forest-steppe, grazing randomized the spatial patterns of net N mineralization and net nitrification. At shrub-steppe and desert-steppe, grazing greatly decreased the semivariances of net N mineralization and net nitrification as well as their averages, and the soil heterogeneity was virtually disappeared.

Conclusions

Grazing in Mongolian grasslands homogenized the spatial patterns of net N mineralization and net nitrification, irrespective of their original spatial patterns determined by the differences in vegetation structure.     

Diurnal Characteristics of Suspended Particulate Matter and PM<Subscript>2.5</Subscript> in the Urban and Suburban Atmosphere of the Kanto Plain,Japan

Suspended particulate matter (SPM) and PM_2.5 in the urban and suburban atmosphere of the Kanto Plain of Japan, which includes the Tokyo metropolitan area, during the period 22–26 July 2002 were characterized. Samples of SPM and PM_2.5 were collected by low-volume samplers at 6-h intervals at Suginami, Saitama, and Kisai. At all the sites, the major components of SPM and PM_2.5 were organic carbon (OC), elemental carbon (EC), and sulfate. The ion balance, the size distributions of the ionic species, and the high correlation between SO₄ ^2? and NH₄ ⁺ indicated that the main chemical form of sulfate was (NH₄)₂SO₄. The OC/EC ratios were larger in the daytime than in the nighttime. The correlation coefficients of OC, OC/EC, and SO₄ ^2? with ozone concentrations at inland sites (Saitama, Kisai) were higher than those at the coastal site (Suginami). Bound water and hydrogen and oxygen atoms associated with OC, the amounts of which were estimated with a mass closure model, contributed substantially to the total particle mass. The chemical characteristics of the particles indicated that two mechanisms led to high concentrations of SPM and PM_2.5: (i) an active photochemical process produced high concentrations of OC and sulfate, leading to a high concentration of (NH₄)₂SO₄ in the particles and to production of secondary organic aerosols; (ii) stable meteorological conditions resulted in accumulation of primary particles, mainly emitted from vehicle exhaust, resulting in high concentrations of OC and EC.     

Early-stage impacts of sika deer on structure and function of the soil microbial food webs in a temperate forest: A large-scale experiment

Modification of forest vegetation caused by an overabundance of mammalian herbivores has been reported in temperate and subarctic regions all over the world. However, the indirect effects of these herbivores on the structure and functions of soil decomposer systems are not fully understood, especially in temperate forests. We investigated the early effects of sika deer invasion on soil decomposer systems in a Japanese temperate forest using two large-scale experimental enclosures with low and high densities of deer (LD: 25 ha, 4 deer km⁻²; HD: 6.25 ha, 16 deer km⁻²) including control plots without deer (WD). Three years after deer introduction the understory cover of dwarf bamboo (Sasa nipponica) declined due to deer browsing in both enclosures. At the same time, measurements were made of the soil microbial community, soil nematode community, soil nitrogen (N) mineralization rate, and carbon (C) and N content in dwarf bamboo leaves. In LD, soil microbial biomass was lower from WD, probably due to the decrease of fresh aboveground litter from dwarf bamboo. Surprisingly, there were no cascading effects on total abundance of soil nematodes and soil total N mineralization potential which were unaffected by deer in the LD treatment, while soil NH₄⁺-N content was lower and soil nematode community structure was different (abundance of 4 families was higher and that of 3 families was lower, but the functional structure was not different) from WD. Specifically, the responses to deer introduction varied between microbes and nematodes, and the change of balance in the microbial food webs may have altered N mineralization processes. In contrast, in the HD treatment, all the variables measured were not significantly different from those of WD treatment. Intensive browsing by deer may have cancelled out the effects of the decrease in aboveground litter input on the soil decomposer systems through other pathways, such as a transitory increase in belowground litter input caused by induced changes in allocation patterns of bamboo. No changes in total N mineralization potential, leaf N, and composition of understory vegetation in both enclosures indicated that deer introduction did not facilitate nor retard N cycling regardless of deer density. This study showed that sika deer browsing can affect soil decomposer systems at an early stage of invasion even at low density, which contrasts with previous studies on the subject. Linking our findings of early-stage effects of deer on soil decomposer systems to longer-term dynamics of understory vegetation and tree regeneration will be needed to evaluate the adequacy of deer management practices with respect to the sustainability of soil nutrient supplies.