Spatial and temporal changes in chlorophyll fluorescence images of Nicotiana benthamiana leaves following inoculation with Pseudomonas syringae pv. tabaci

Inoculation of Nicotiana benthamiana leaves with virulent and avirulent strains of Pseudomonas syringae pv. tabaci resulted in increasing changes in F_v/F_m, and NPQ over time. Images of these chlorophyll a fluorescence measurements revealed different changes in different zones of the leaf. For the virulent strain, the infiltrated zone and zone directly surrounding it showed decreased F_v/F_m, and NPQ before the appearance of visible symptoms, and these decreases corresponded with increasing bacterial populations and putative tabtoxin activity. Another distinct zone of reduced F_v/F_m and NPQ extended several centimetres from the lesion to the nearest leaf margin, but only very low bacterial populations and no putative tabtoxin activity were detected in this zone. For the avirulent strain, a hypersensitive response occurred, bacterial populations remained low, and there was little detectable putative tabtoxin activity. Decreased F_v/F_m and NPQ, but not , were observed in the infiltrated zone prior to the hypersensitive response, followed by decreased values in a zone directly surrounding it. Following that, no further changes were observed. These results demonstrate that in addition to detecting pre‐symptomatic impacts of bacteria, chlorophyll a fluorescence imaging can also show that there are highly distinct regions of affected tissue that can extend considerably beyond the area of bacterial colonization. This should be considered in selecting leaf tissues for examining the effects of pathogens on plants, such as altered host gene expression or protein levels.     

Development of a pooled probe method for locating small gene families in a physical map of soybean using stress related paralogues and a BAC minimum tile path

Background  

Genome analysis of soybean (Glycine max L.) has been complicated by its paleo-autopolyploid nature and conserved homeologous regions. Landmarks of expressed sequence tags (ESTs) located within a minimum tile path (MTP) of contiguous (contig) bacterial artificial chromosome (BAC) clones or radiation hybrid set can identify stress and defense related gene rich regions in the genome. A physical map of about 2,800 contigs and MTPs of 8,064 BAC clones encompass the soybean genome. That genome is being sequenced by whole genome shotgun methods so that reliable estimates of gene family size and gene locations will provide a useful tool for finishing. The aims here were to develop methods to anchor plant defense- and stress-related gene paralogues on the MTP derived from the soybean physical map, to identify gene rich regions and to correlate those with QTL for disease resistance.     

Prevalence and mortality rate of peste des petitis ruminant (ppr): possible association with abortion in goat

Present study was designed to investigate the prevalence and mortality (%) caused by Peste des Petitis Ruminant (PPR) and its possible association with abortion in goat flocks at different areas of Pakistan. A total of 140 animals were samples in the population of 650 which was having 185 deaths (Mortality rate = 28 %) from three different regions of the country. There were 58 abortions in the 140 pregnant goats of above said population One hundred & ten (110) serum samples from diseased, recovered and apparently healthy animals were tested for the presence of PPR antibodies by competitive ELISA (c ELISA). Eighty-four (84) animals were positive for PPR antibodies whereas in apparently healthy adult goats in the same flock, no PPR antibodies were detected. Twenty-four (24) tissue samples collected from the dead animals and six samples from aborted fetus were tested for the presence of PPR antigen by Immuno-capture ELISA (Ic ELISA). Nineteen (19) out of thirty (30) organ samples mainly from lung, spleen, lymph node were found positive for PPR antigen but negative from lungs of aborted fetus. There was a high rate of abortions (28–45 %) in each of the outbreak and it was highest in the outbreak of Golra Sharif, Islamabad (No. = 21 in total population of 100). As the serum samples from the aborted dams were found positive for PPR antibodies so the study provides the possible association of mortality and prevalence of PPR disease with high rate of abortions in goat.     

Assessing yield optimization and water reduction potential for summer-sown and spring-sown maize in Pakistan

Agricultural food production in arid and semi-arid regions faces the challenge to ensure high yields with limited supply of water. This raises the question to which extent irrigation supply can be reduced without detriment to yield. Our study focuses on the yield-water uptake relationship for maize in the moderate water stress range in order to determine the onset of stress-induced dry-matter and yield losses. Compensatory plant responses under moderate stress levels are discussed in relation to seasonal climatic conditions.Summer-sown and spring-sown maize were irrigated with a decreasing amount of water in a field experiment in Pakistan. Water supply ranged from 100% water required to maintain soil at field capacity (FC) to 40% of FC. The average dry-matter and yield levels were slightly higher for summer-sown (15.0 Mg ha⁻¹) compared to spring-sown maize (13.1 Mg ha⁻¹). The onset of significant dry-matter and yield reduction started at the least irrigation treatment in both seasons. The amount of water required to avoid production losses was 272 mm in the summer-sown maize during the autumn growing season, and 407 mm for the spring-sown maize in the summer season, when the evaporative demand of the atmosphere was +27% higher. Water use efficiency (WUE_ET), normalized by vapour pressure deficit, of the summer-sown maize which was 10.0 kg kPa m⁻³, was +15% higher compared to the spring-sown crop; while the irrigation water productivity (2.9 kg m⁻³) was +11% more. WUE_ET increased over the whole range of applied water deficits for summer-sown maize, while the spring-sown crop showed a decreasing WUE_ET in the less irrigated treatment. Due to the higher efficiency in summer-sown maize, the potential in irrigation reduction without production losses (129 mm) was higher compared to the spring-sown maize (57 mm). Our results showed that in Pakistan water saving irrigation practices can be applied without yield loss mainly during the cooler growing season when the crop can efficiently compensate a lower total water uptake by increased use efficiency. For spring-sown maize the increasing evaporative demand of the atmosphere towards summer implies a higher risk of yield losses and narrows the range to exploit higher irrigation water productivity under moderate water deficit conditions.     

Evidence for Resistance to Bacillus thuringiensis (Bt) subsp. kurstaki HD-1, Bt subsp. aizawai and Abamectin in Field Populations of Plutella xylostella from Malaysia

The efficacy of Bacillus thuringiensis (Bt) subsp. kurstaki HD-1 (‘Dipel’™; Btk; CryIA & CryII) and Bt. subsp. aizawai (‘Florbac’™; Bta; CryIA & CryIC) was assessed against larvae from various field populations of Plutella xylostella (F2 generation) collected in the Cameron Highlands, Malaysia in April 1994 and a lowland population (SERD 2; F10 generation) collected in December 1993. Evidence of resistance to Btk and to a lesser extent Bta is reported in these populations (LC₅₀ Toxicity Ratios [TR]=3–14 and 2–8 respectively), most notably in SERD 2. The first recorded evidence of resistance to abamectin (TR=17–195-fold) in field populations of P. xylostella is also reported. In an unselected sub-population of SERD 2, the TR values for Btk, Bta and abamectin declined 2- to 3-fold (P<0·01) over six generations in the laboratory (F10–F16) while in sub-populations of SERD 2 selected with these products (F11–F15) there was a significant (P<0·01) increase in the TR (15-, 3- and 2·5-fold respectively) when compared with the F10 generation. This suggests the presence of marked resistance to Btk and some resistance to Bta and abamectin. There is also evidence of slight cross-resistance to Btk in the Bta-selected sub-population but no evidence for the reverse selection of resistance or for cross-resistance between Btk and abamectin. Concurrent selection studies (F11–F15) with another sub-population of SERD 2 demonstrated resistance to the acylurea insect growth regulator, teflubenzuron (‘Nomolt’™) (29-fold increase in TR). Based on the selection experiments with SERD 2, estimates of realised heritability (h²) of resistance gave very high values for teflubenzuron and Btk (c.0·7) and moderate values for abamectin and Bta (c.0·3). The results are discussed in relation to integrated pest management (IPM) and insecticide resistance management (IRM) strategies for P. xylostella.     

Effect of waste water and fly ash application on physiological determinants,yield, and heavy metal contents of yellow mustard (B. campestris cv. P. Gold)

A pot experiment was conducted to study the comparative effect of waste water (WW) and ground water (GW) alone and along with different nitrogen (N), phosphorus (P), and potassium (K) combinations (N₀P₀K₀, N₄₀P₁₅K₁₅, N₆₀P₃₀K₃₀, N₈₀P₄₅K₄₅) together with different levels of fly ash (FA) (FA₀, FA₁₀, FA₂₀), to obtain a suitable combination of fertilizers, FA and water based on the growth, physiology, yield, and heavy metal contents of Brassica campestris cv. Pusa Gold. Results revealed that WW irrigation proved beneficial over GW. All the parameters increased in both levels of FA₁₀ and FA₂₀ along with three doses of NPK but FA at 20 t ha^?1 proved better. The effect was more efficacious with both wastes together which makes NPK optimum at N₆₀P₃₀K₃₀ instead of N₈₀P₄₅K₄₅ treatment combinations and thereby lowered input of fertilizers. Therefore, utilization of these wastes may be recommended for the purpose of irrigation, soil amendment, and as a source of nutrients in augmenting the mustard yield.     

Carbon-to-nitrogen ratio is a poor predictor of low molecular weight organic nitrogen mineralization in soil

Carbon-to-nitrogen ratio (C:N) has frequently been shown to be a good predictor of the speed of organic residue decomposition and N mineralization in soil. While this relationship appears to work well for complex organic materials (e.g. plant litter), its applicability to smaller organic substrates containing N remains unknown. Here we evaluated whether the intrinsic properties of amino acids and peptides could be used to predict their rate of microbial uptake and subsequent N mineralization. In an agricultural grassland soil we found that C:N, molecular weight, aromaticity and sulphur content provided poor indicators of amino acid bioavailabilityand subsequent NH₄⁺ release into soil. We therefore hypothesize that the position of amino acids along microbial biosynthetic pathways together with internal demand for individual amino acids rather than their C or N content is the primary determinant of N mineralization.     

Soil Application of Boron Improves the Tillering,Leaf Elongation,Panicle Fertility,Yield and its Grain Enrichment in Fine-Grain Aromatic Rice

Boron (B) is one of the essential micronutrients having a specific role, particularly during reproductive phase, in rice. In a previous experiment on aerobic rice, panicle sterility was noted as one of the major challenges. This experiment was conducted to evaluate the influence of soil-applied B on tillering, panicle sterility, water relations, and grain enrichment in fine-grain aromatic rice cultivars ‘Super Basmati’ and ‘Shaheen Basmati’. Boron was soil applied at 0.50, 0.75, 1, 1.25, and 1.50 kg ha^?1 while the control treatment did not receive B. Rate of leaf emergence and elongation and tiller appearance were significantly improved by B application. Likewise, B application also improved the leaf chlorophyll contents and water relations in both rice cultivars. Substantial improvement in kernel yield and yield contributing traits was also observed by B application owing to decrease in panicle sterility. A linear increase in leaf and kernel B contents was observed with increase in B application rate. However, the range for an optimum B application rate is very narrow and increase of B application beyond 1 kg ha^?1 was toxic. In conclusion, soil application of B is an effective way to decrease panicle sterility and increase the kernel yield and grain B enrichment in rice.