Evaluation of Submergence Tolerance in Landrace Rice Cultivars by Various Growth and Yield Parameters

Journal of Crop Science and Biotechnology - Flash flood causes a serious damage to rice crops in northern and eastern parts of Bangladesh almost every year. This study was designed to identify...     

Separation and characterization of the constituents of compost and soil humic acids by two-dimensional electrophoresis

To investigate the chemical heterogeneity of humic acids (HAs), we applied two-dimensional (2-D) electrophoresis to HAs from a compost and two types of soils. In this method, HAs are first separated by isoelectric focusing (IEF) and then separated by polyacrylamide gel electrophoresis (PAGE). IEF and PAGE were carried out in the presence of 7?M urea. Upon 2-D electrophoresis of HAs, dark-colored substances were spread out across the gel mainly in the isoelectric point (pI) range of 3.0–4.5. Green fluorescence was observed in the smaller molecular size region of the gel, especially in the pI range of 3.0–4.5, and the most intense fluorescence was found at the moving front. The gels were divided into 36 sections, and then HA constituents were extracted from the individual sections and recovered by precipitation with acid. The distribution of organic carbon (C) among the gel sections coincided with that of the dark-colored substances on the gel. The total C recoveries were only 43–50%, suggesting that a considerable amount of HA constituents was lost during the extraction from the gels and purification. High-performance size-exclusion chromatography confirmed that the constituents of HAs were separated based on their molecular sizes by PAGE. The measurement of diffuse reflectance infrared Fourier transform (DRIFT) spectra indicated that the chemical properties of the HA constituents differed depending on the position on the gels and were affected by the molecular size rather than the pI. The fractions of the compost HA were characterized by higher proportions of aliphatic, proteinous and polysaccharide moieties and by the presence of lignin-derived structures. For the soil HAs, the fractions were characterized by a high proportion of the carboxyl group and a low proportion of aliphatic moieties. The proportion of proteinous and polysaccharide moieties in the fractions of soil HAs decreased with decreasing molecular size. The chemical properties of the green fluorescent substances remained unclear, since there was not enough of the substances to measure the DRIFT spectra. The present study showed that 2-D electrophoresis in the presence of concentrated urea offers an effective method for fractionating and isolating the constituents of HAs.     

Honey with high levels of antioxidants can provide protection to healthy human subjects

Free radicals and reactive oxygen species (ROS) have been implicated in contributing to the processes of aging and disease. Humans protect themselves from these damaging compounds, in part, by absorbing antioxidants from high-antioxidant foods. This report describes the effects of consuming 1.5 g/kg body weight of corn syrup or buckwheat honey on the antioxidant and reducing capacities of plasma in healthy human adults. The corn syrup treatment contained 0.21 +/- 0.06 mg of phenolic antioxidants per gram, and the two buckwheat honey treatments contained 0.79 +/- 0.02 and 1.71 +/- 0.21 mg of phenolic antioxidants per gram. Following consumption of the two honey treatments, plasma total-phenolic content increased (P < 0.05) as did plasma antioxidant and reducing capacities (P < 0.05). These data support the concept that phenolic antioxidants from processed honey are bioavailable, and that they increase antioxidant activity of plasma. It can be speculated that these compounds may augment defenses against oxidative stress and that they might be able to protect humans from oxidative stress. Given that the average sweetener intake by humans is estimated to be in excess of 70 kg per year, the substitution of honey in some foods for traditional sweeteners could result in an enhanced antioxidant defense system in healthy adults.     

New genes for resistance to green leafhopper, Nephotettix virescens (distant) in rice, Oryza sativa L.

The inheritance of resistance to the green leafhopper, Nephotettix virescens (Distant) (Homoptera: Cicadellidae), in 12 cultivars of rice (Oryza sativa L.) was studied at Joydebpur, Bangladesh. The resistance of Kosatawee is governed by a single recessive gene. The remaining 11 varieties possess single dominant genes for resistance, which are different from the genes Glh 1, Glh 2, Glh 3 and Glh 5. The single dominant genes conveying resistance in TAPL 796, Ptb 18 and IR36 are allelic to each other but are non-allelic to the dominant resistance gene of Maddai Karuppan. The resistance genes in TAPL 796 and Maddai Karuppan were designated Glh 6 and Glh 7 respectively. The dominant resistance gene in Sulai is independent of Glh 6, but its allelic relationship to Glh 7 is not known. The allelic relationships of the dominant genes for resistance of Sulai, TAPL 628, TAPL 651, Leu-Wei-Theu, Bir-co-se-mao-17, Gu-win-gu-gi-goo, and Dikwee to Glh 6 and Glh 7 need to be investigated.     

A study of phosphate adsorption by four Bangladesh soils

The adsorption curves for four soils were divided into segments I, II and III. Segment I ($\text{< 2}\text{μg P/ml equil. concn.}$) and segment II (2–150 μg P/ml equil. concentr.) conformed to the Langmuir equation similar to that of pure materials like gibbsite, pseudoboehmite and kaolinite, whereas segment III $\text{(> 75–150 μ}\text{g P/ml equil. concn.}\text{)}$ conformed to the Freundlich equation and was unlike the previous finding of linear relationship for pure materials.     

Identification of bacterial agents causing mortality in postlarvae of giant freshwater prawn (Macrobrachium rosenbergii) in south‐west coastal districts of Bangladesh

Following an incidence of freshwater prawn Macrobrachium rosenbergii postlarvae (PL) mortality in hatcheries in summer 2012, samples from dead PL, rearing water and prawn feed from two south‐west coastal districts of Bangladesh were collected to isolate, identify and characterize the agents causing PL mortality. Antibiogram profile of sixteen randomly selected bacteria, isolated from dead PL, that grew on TCBS, to 20 different antibiotics belonging to 12 major groups revealed that the drug resistance pattern varied from moderate (56% to the drugs: ciprofloxacin, cefotaxime, nitrofurantoin, kanamycin) to complete (to penicillin, ceftazidime and oxacillin) level. To identify the isolates, amplified rDNA restriction analysis (ARDRA) classified them in to four groups, and RAPD (randomly amplified polymorphic DNA) typing yielded nine different types of isolates within these four ARDRA groups. The 16S rDNA gene sequences identified that the groups were genotypically diverse belonging to the bacterial species: Enterobacter cloacae, Klebsiella pneumoniae, Exiguobacterium profundum and Enterococcus casseliflavus, respectively, that all demonstrated their killing potential to PLs in a simulated environment. The study therefore identified four different bacterial pathogens, one of which, Exiguobacterium profundum is reported for the first here in Bangladesh, that demand special consideration for disease management strategy.     

Short-term hooking mortality of three marine fish species (Sparidae) caught by recreational angling in the south Portugal

Short-term hooking mortality was evaluated for three sparid species [Diplodus vulgaris (Geoffroy Saint-Hilaire), Sparus aurata L. and Spondyliosoma cantharus (L.)] in the Algarve, south Portugal. Fishes were caught from the shore during October 2009 at a fish farm reservoir (Ria Formosa), using three different hook sizes. The relationships between hooking mortality and seven independent variables were analyzed using logistic regression models. In all, 384 fishes representing the three target species were caught during the angling sessions. The most caught species was S. cantharus (n = 181; 100% undersized), followed by S. aurata (n = 137; 89% undersized) and D. vulgaris (n = 66; 97% undersized). Mortalities ranged between 0% for D. vulgaris and 12% for S. aurata (S. cantharus, 3%). For S. aurata, anatomical hooking location was the main predictor of mortality, with 63% of the fishes that died being deeply hooked. Our results support the current mandatory practices of releasing undersized fish for the studied species, given the low post-release mortality rates observed.     

Genetic improvement of wheat grain quality at CIMMYT

The International Maize and Wheat Improvement Center (CIMMYT) is the global leader in publicly-funded maize and wheat research and in farming systems based on these crops. CIMMYT leads the Global Wheat Program (GWP), which includes some of the largest wheat breeding programs in the world. The GWP has been successful in developing wheat germplasm that is used extensively worldwide. Wheat quality improvement is a central component of all the breeding efforts at CIMMYT and the Wheat Chemistry and Quality Laboratory represents an integral part of the breeding programs. Wheat quality is addressed at CIMMYT over the full range of this very wide and variable concept with milling, processing, end-use and nutritional quality targeted. Wheat progenitors and advanced lines developed by the breeders are assessed for diverse quality attributes, with the aim of identifying those that fulfill the requirements in terms of milling, processing, end-use and nutritional quality in different target regions. Significant research is conducted to make more efficient the integration of wheat quality traits in the breeding programs. The main topics being addressed are (1) methodologies to analyze grain quality traits, (2) genetic control and environmental effects on quality traits, (3) characterization of genetic resources for quality improvement, and (4) diversifying grain properties for novel uses.     

INTEGRATED NUTRIENT MANAGEMENT FOR CABBAGE-BRINJAL-RED AMARANTH CROPPING PATTERN IN HOMESTEAD AREA

An experiment was conducted to study the effect of organic manure and chemical fertilizers on soil properties and vegetable crops in the cabbage-brinjal-red amaranth cropping pattern at the homestead in a Grey Terrace Soil (Aric Albaquept) of Bangladesh. There were eight treatments: poultry manure (PM) at 5 t ha^?1, cowdung (CD) at 10 t ha^?1, household waste (HW) at 10 t ha^?1, PM at 2.5 t ha^?1 + chemical fertilizers (CF), CD at 5 t ha^?1 + CF, HW at 5 t ha^?1 + CF, CF, and Control. The lone CF treatment indicates 100% chemical fertilizers and any manure + CF indicates supplementary or reduced rate of fertilizers. The PM at 2.5 t ha^?1 + CF treatment performed the best yield for cabbage and brinjal, and HW at 5 t ha^?1 + CF yielded the highest for red amaranth. The highest uptake of nitrogen, phosphorus, potassium, and sulfur was also found in the treatment that produced the highest yield. Bulk density, organic carbon, and nutrient availability in soil as determined after two-crop cycles were improved due to the applications of manure.     

Bergmann glial AMPA receptors are required for fine motor coordination

The impact of glial neurotransmitter receptors in vivo is still elusive. In the cerebellum, Bergmann glial (BG) cells express α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA)-type glutamate receptors (AMPARs) composed exclusively of GluA1 and/or GluA4 subunits. With the use of conditional gene inactivation, we found that the majority of cerebellar GluA1/A4-type AMPARs are expressed in BG cells. In young mice, deletion of BG AMPARs resulted in retraction of glial appendages from Purkinje cell (PC) synapses, increased amplitude and duration of evoked PC currents, and a delayed formation of glutamatergic synapses. In adult mice, AMPAR inactivation also caused retraction of glial processes. The physiological and structural changes were accompanied by behavioral impairments in fine motor coordination. Thus, BG AMPARs are essential to optimize synaptic integration and cerebellar output function throughout life.