Assessing the association of single nucleotide polymorphisms at the thyroglobulin gene with carcass traits in beef cattle

The objective of this study was to assess the association of SNP in the thyroglobulin gene, including a previously reported marker in current industry use, with marbling score in beef cattle. Three populations, designated GPE6, GPE7, and GPE8, were studied. The GPE6 population sampled breeds that could be used as alternative germplasm sources in beef cattle production, including Wagyu, Swedish Red and White, Friesian, and Norwegian Red. The GPE7 population sampled 7 popular beef cattle breeds used in temperate climates of the United States: Angus, Charolais, Gelbvieh, Hereford, Limousin, Red Angus, and Simmental. The GPE8 population sampled Bos indicus-influenced breeds used in subtropical regions of the country and subtropical and tropical regions of the world, including Beefmaster, Bonsmara, Brangus, and Romosinuano. Evaluation of 6 SNP in the thyroglobulin gene, including 5 newly described variations, showed no association (P > 0.10) with marbling score in these populations, except a tendency (P < 0.10) for an association with the previously described marker in GPE6. Closer examination of the GPE6 data revealed that the source of the tendency was an association (P < 0.02) with marbling in animals of Wagyu inheritance. Animals having Wagyu background and inheriting the TT genotype had a greater marbling score (599 +/- 20) than those inheriting the CC (540 +/- 10) or the CT (541 +/- 11) genotype. No association was detected with any other carcass trait for this marker in the 3 populations. Furthermore, none of the 5 newly described markers in the gene displayed an association with marbling score. The data indicate that markers at the thyroglobulin gene may be a useful predictor of marbling performance for producers raising Wagyu-based cattle. Although associations with marbling score in the remaining populations were not large or significant, the TT genotype had the numerically greatest marbling score in each population.     

The in vitro reduction of sodium [36Cl]chlorate in bovine ruminal fluid

Sodium chlorate effectively reduces or eliminates gram-negative pathogenic bacteria in the gastrointestinal tracts of live cattle. Limitations to the in vivo efficacy of chlorate are its rapid absorption from the gastrointestinal tract and its presumed reduction to chloride within the gastrointestinal tract. We hypothesized that chlorate would be reduced via ruminal bacteria in a ruminal in vitro system and that the reduction of chlorate would be influenced by the dietary for-age:concentrate ratio; thus, 4 ruminally cannulated steers were fed 20 or 80% concentrate diets in a crossover design. Ruminal fluid was collected in 2 periods and dispensed into in vitro tubes containing sodium [36Cl]chlorate, which was sufficient for 100 or 300 mg/L final chlorate concentrations. The tubes were incubated for 0, 1, 4, 8, 16, or 24 h; autoclaved, control ruminal fluid, fortified with sodium [36Cl]chlorate, was incubated for 24 h. Chlorate remaining in each sample was measured by liquid scintillation counting after [36Cl]chloride was precipitated with silver nitrate. A preliminary study indicated that chlorite, a possible intermediate in the reduction of chlorate, had a half-life of approximately 4.5 min in freshly collected (live) ruminal fluid; chlorite was, therefore, not specifically measured in ruminal incubations. The chlorate dose did not affect in vitro DM digestion (P > or = 0.11), whereas in vitro DM digestibility was decreased (P < or = 0.05) by 80% forage content. By 24 h, 57.5 +/- 2.6% of the chlorate remained in 100-mg/L incubations, whereas 78.2 +/- 2.6% of the chlorate remained in the 300-mg/L incubations. When the data were expressed on a concentration basis (mg/L), diet had no effect (P > or = 0.18) on chlorate reduction; however, when chlorate reduction was expressed on a percentage basis, chlorate reduction tended to be greater (P > or = 0.09) at 8 and 16 h in the incubations containing the low-concentrate diet. Chlorate remaining in autoclaved controls at 24 h was intermediate (P < 0.01) between chlorate remaining in live ruminal fluid samples incubated for 0 or 24 h. Attempts to isolate chlorate-respiring bacteria from 2 sources of ruminal fluid were not successful. These data indicate that microbial-dependent or chemical-dependent, or both, reduction of chlorate occurs in bovine ruminal fluid and that dietary concentrate had a negligible effect on chlorate reduction.     

Evaluation of hemostatic derangements associated with canine anaphylaxis and the relationship to syndrome severity

Objective

To describe hemostatic derangements associated with canine anaphylaxis and to assess for association with syndrome severity.

Design

Prospective observational study.

Setting

University teaching hospital.

Animals

Twenty-seven client-owned dogs, recruited from November 2018 to January 2022, diagnosed with anaphylaxis of varying severity were included. Study inclusion required presentation <6 hours after initiation of clinical signs, no medications or history of illness within the prior 2 weeks, lack of comorbidities expected to affect hemostasis, and lack of a disease state that could alternatively explain the clinical presentation.

Interventions

Blood samples were collected within the first hour of presentation for CBC, serum biochemistry, prothrombin time (PT), activated partial thromboplastin time (aPTT), and viscoelastic coagulation testing for use with a cartridge-based point-of-care device.

Measurements and main results

Clotting time and clot formation time were prolonged, alpha angle and maximum clot firmness were decreased, PT and aPTT were prolonged, and platelet counts were lower in severe cases compared to mild and moderate cases. There were no differences for any parameter between mild and moderate cases. The presence or absence of abdominal effusion was not associated with hemostatic status.

Conclusions

Global hemostatic derangements consistent with hypocoagulability are a prominent feature of severe anaphylaxis in dogs and should be considered for routine evaluation.     

An economist's perspective on irrigation performance assessment: With examples from large scale irrigation in Morocco

This paper accepts that assessing the performance of irrigated agriculture is difficult because being multi-dimensional it requires a multi-disciplinary approach. Public irrigation schemes may have a number of often competing objectives and are assessed by interest groups with differing values and perspectives. A wide range of performance indicators are thus required. Some of these and the complex inter-relationships that may exist in the system are illustrated.     

The River Wadu role play — ten years experience

This paper describes a role playing planning exercise that has been used for training agriculturists, engineers and agricultural economists for more than ten years. It sets out the objectives and key features of the exercise and the experience that has been gained in its use. The exercise has been found to successfully test and integrate subject matter expertise acquired from formal teaching. It also highlights the multiple and often conflicting objectives of irrigation planning, and the need for full evaluation of alternatives and sound technical judgements under conditions of inadequate data and time pressure. The exercise is also successful in developing professional personal skills such as group working, interviewing and presentation, and is recommended as an effective training aid.     

Water use estimates for various rice production systems in Mississippi and Arkansas

Rice irrigation-water use was estimated in Mississippi (MS) and Arkansas (AR) in 2003 and 2004. Irrigation inputs were compared on naturally sloping (i.e. contour-levee system) and mechanically graded fields. In MS, rice production consumed, on average, 895 mm water, but irrigation inputs were greatly affected by production system. Contour-levee systems accounted for 35% of the production area and consumed 1,034 mm irrigation. Fields mechanically graded to a consistent slope of approximately 0.1% (i.e. straight-levee systems) consumed 856 mm irrigation and accounted for 60% of the production area. Fields devoid of slope (i.e. zero-grade system) accounted for 5% of the production area and consumed 382 mm irrigation. In AR, contour-levee rice production consumed 789 mm compared to 653 mm with a straight-levee system. Using low pressure, thin wall (9–10 mil) disposable irrigation tubing to deliver water to each paddy independently reduced irrigation inputs by 28% in MS and 11% in AR when compared to a single-point (levee-gate) distribution system.     

Accounting for temporal inflow variation in the inverse solution for infiltration in surface irrigation

A simple modification of the volume balance equation of the IPARM model is presented to facilitate the use of variable inflow. Traditional approaches for estimating infiltration from advance and/or runoff have merely considered the constant or step inflow case. Whenever this assumption is violated, significant uncertainty is introduced into the estimated infiltration parameters. Evaluation of the procedure with a number of data sets has demonstrated significant improvements in the estimates of infiltration parameters. Furthermore, the technique has shown that a portion of the apparent variability in estimated soil intake rates between furrows in the same field is a consequence of the constant inflow assumption. Accounting for the variable inflow to estimate infiltration functions, both standardised the shape of the infiltration curve and reduced the magnitude of the variation between curves. The proposed technique remains restricted by limitations similar to that of other volume balance models but offers greater performance under typical inflow variations often experienced in practice.     

The effect of irrigation and nitrogen fertilizer on rapeseed (Brassica napes) production in South-Eastern Australia

Summary A field trial was conducted to determine the response of rapeseed (Brassica napus cv. Marnoo) to two irrigation treatments and six nitrogen fertilizer treatments. Dry matter accumulation, leaf area development and seed yield were measured. The dry matter and seed yield response to applied nitrogen was greater under irrigated compared to rainfed conditions. Maximum seed yield (approx. 3.8 t ha^–1) was obtained from the irrigated treatment receiving 100 kg N ha^–1 applied at sowing. This high rate of N application at sowing led to more rapid leaf area development and higher maximum LAI compared to treatments supplied with split application of the same amount of N at sowing and rosette stages. Greater partitioning of dry matter into the leaf component and higher specific leaf areas under the higher N regime were largely responsible for this increase. Higher maximum LAI's were associated with greater numbers of pods per plant, which combined with longer leaf area duration led to higher final seed yields.