Production of specific antibodies against SARS-coronavirus nucleocapsid protein without cross reactivity with human coronaviruses 229E and OC43

Severe acute respiratory syndrome (SARS) is a life-threatening disease for which accurate diagnosis is essential. Although many tools have been developed for the diagnosis of SARS, false-positive reactions in negative sera may occur because of cross-reactivity with other coronaviruses. We have raised polyclonal and monoclonal antibodies (Abs) using a recombinant form of the SARS virus nucleocapsid protein. Cross-reactivity of these anti-SARS Abs against human coronavirus (HCoV) 229E and HCoV OC43 were determined by Western blotting. The Abs produced reacted with recombinant SARS virus nucleocapsid protein, but not with HCoV 229E or HCoV OC43.     

“家禽微量元素营养”专栏五：微量元素及其生物利用率的重要性

在对不同来源的微量元素进行比较时,关键问题是要考虑其生物利用率.另外,对铬元素要有新的认识.     

Spatial variability and concentration of arsenic in the groundwater of a region in Nadia district,West Bengal,India

Arsenic pollution in ground water in India and Bangladesh is considered to be the largest contamination problem in the world. About 15?–?18% of the area of West Bengal, India comes under the threat of arsenic (As) contamination and around 5.36 million people are exposed to this hazard. A detailed isoline map corresponding to variations in arsenic concentration and their spatial distribution was prepared for the study area, which comprised two villages Ghentugachi and Gotera in Nadia district, West Bengal and the total area covered was 808 hectares. The pattern of arsenic contamination was highly irregular and diverse. About 11.2% of the study area was affected most (?>?0.50?mg As l^?1) with sample As values reaching 0.71 and 0.80?mg?l^?1. About 22.5% of the area had As content between 0.20 and 0.50?mg?l^?1 and 33.9% of study area had As content below the WHO guideline of 0.01?mg As/l. Thus the local population living around these areas is vulnerable and exposed to arsenic contamination. None of the water samples exceeded the allowable limit (1.0?mg As l^?1) of As for water used in irrigation purposes. The spatial distribution map helped to determine zones with different As concentrations, making it possible to identify high-risk zones.     

Stem and leaf rust resistance in wild relatives of wheat with D genome (Aegilops spp.)

Resistance to stem rust and leaf rust in five D genome species of wheat viz., 267 accessions of Aegilops tauschii Coss., 39 of Ae. cylindrica Host, 17 of Ae. ventricosa Tausch, 4 of Ae. crassa Boiss. and 8 of Ae. juvenalis (Thell.) Eig were evaluated at adult plant stage. Two hundred and thirty nine (90 %) accessions of Ae. tauschii, 30 (77 %) of Ae. cylindrica, 16 (94 %) of Ae. ventricosa, 3 (75 %) of Ae. crassa Boiss. and 5 (62.5 %) of Ae. juvenalis were resistant to stem rust pathotypes prevalent in South India at Wellington under field condition. Invariably, all the accessions of the five species were resistant to leaf rust pathotypes. Quantitative measurement of disease using area under the disease progress curve revealed the slow progress of disease in the resistant accessions compared to susceptible check (Agra Local). Since all the five species have D genome, it could be concluded that the genes present in D genome might play a vital role in leaf rust resistance, but in case of stem rust resistance wide range of differential response was noticed. Among the species evaluated, Ae. tauschii was exploited to a larger extent, followed by Ae. ventricosa and Ae. cylindrica for leaf and stem rust resistance because of the homology of D genome with hexaploid bread wheat. While, Ae. crassa and Ae. juvenalis could not be utilized so far, possibly due to partial homology which makes the transfer of traits difficult. So, these species have considerable potential as a source of rust resistance and may enhance the existing gene pool of resistance to stem and leaf rusts.     

Suberin Biopolymer in Rice Root Exodermis Reinforces Preformed Barrier Against Meloidogyne graminicola Infection

Exploration of novel genetic resources against root-knot nematode (RKN) is necessary to strengthen the resistance breeding program in cultivated rice, and investigations on the role of genotype-specific root anatomy in conferring a structural barrier against nematode invasion are largely underexplored. Here, we reported a highly-resistant rice germplasm Phule Radha that conferred remarkably lower RKN parasitic fitness in terms of reduced penetration and delayed development and reproduction when compared with susceptible cultivar PB1121. Using histological and biochemical analyses, we demonstrated that an enhanced suberin deposition in the exodermal root tip tissue of Phule Radha compared to PB1121 can effectively form a penetrative barrier against RKN infection, and this preformed barrier in the control tissue did not necessarily alter to a greater extent when challenged with RKN stress. Using qRT-PCR analysis, we showed that a number of suberin biosynthesis genes were greatly expressed in the exodermis of Phule Radha compared to PB1121. In sum, the present study established the role of rice exodermal barrier system in defense against an important soil-borne pathogen.     

Characterization of shiga toxin producing (STEC) and enteropathogenic Escherichia coli (EPEC) in raw yak (Poephagus grunniens) milk and milk products

Thirty-one shiga toxin-producing (STEC) and 6 enteropathogenic Escherichia coli (EPEC) were isolated from 87 raw yak milk and 63 'churpi' samples. Of 18 stx(1) positive isolates (48.6%), 14 carried stx(1c) (77.7%). Subtyping of 28 stx(2) positive isolates (75.7%) revealed the presence of stx(2c) (9, 32.1%), stx(2d) (3, 10.7%), stx(2e) (1, 3.57%) and stx(2f) (3, 10.7%) variants. Furthermore, intimin (eaeA), enterohaemolysin (ehxA), autoagglutinating adhesin (saa), iha (adherence conferring protein), efa1 (EHEC factor for adherence), bundle forming pilli (bfpA) and toxB (type III secreted protein encoded on LEE Island, similar to toxin B of Clostridium difficile) genes were detected in 14, 16, 12, 4, 3, 2 and 2 isolates, respectively. Univariate and multivariate analysis depicted that both stx(1) and stx(2) or their variants were more likely to occur in isolates from Arunachal Pradesh (p<0.04) rather than Sikkim. Dendogram constructed on the basis of RAPD and ERIC PCR profile distributed the STEC and EPEC isolates in separate clusters irrespective of their sources and serotypes. The STEC and EPEC isolates exhibited resistance against erythromycin, amikacin, azithromycin, amoxicillin, ampicillin+cloxacillin, cephalothin, furazolidone, gentamicin, kanamycin, streptomycin and tetracycline. This is the first ever report on occurrence and characterization of STEC and EPEC isolated from yak milk and milk products.     

Litter decomposition and nutrient release in relation to atmospheric deposition of S and N in a dry tropical region

Temporal and spatial variations in litterfall, leaf litter decomposition and nutrient release were quantified along an air pollution gradient around an industrial area in a dry tropical region of India. Significant differences were found in litterfall between the sites. Litter decomposition rates also significantly varied among the study sites. Litter decomposition was faster at sites away from the industrial region with coal-fired power plants. The concentrations of N and P increased, whereas that of Ca and SO₄-S decreased in decomposing litter over time. The nutrient release pattern was also modified by atmospheric deposition. Concentrations of SO₂ and NO₂ were negatively correlated with relative mass loss. Turnover time of nutrients, except SO₄-S in decomposing litter was maximal at the site receiving highest atmospheric depositions. The study documents that industrial emissions significantly modified nutrient cycling in adjacent terrestrial ecosystems.