Effects of continuous optimal fertilization on belowground ectomycorrhizal community structure in a Norway spruce forest

Studies of effects of fertilizer treatment on ectomycorrhizal fungal community structure have predominantly been based on large, single additions of nitrogen. Studies involving chronic additions of nutrients in combination with irrigation are much less common. We used morphotyping to study effects of balanced additions of a nutrient solution on ectomycorrhizal fungal community structure in a 36-year-old stand of Picea abies (L.) Karst. Despite high variability among individual samples, principal components analysis revealed a clear shift in community structure in response to fertilization. Irrigated plots receiving only water did not differ significantly from untreated control plots. Mycorrhizal root tips colonized by Cenococcum geophilum Fr. were significantly more common in fertilized plots than in control plots. Possible responses by other ectomycorrhizal species were masked by high variability. Over sixty morphotypes were distinguished, but there was no measurable effect of either fertilizer or irrigation treatment on morphotype richness or total number of root tips.     

The persistence of secondary forests on colonist farms in the BrazilianAmazon

While slash-and burn farmers convert forest to agriculture, they also regenerate significant areas of secondary fallow forests on their farms. Under what conditions does secondary forest cover persist on slash-and-burn farms? Survey data from Pará, Brazil show that secondary forests occupy 20% of farm area even after a century of settlement. In addition to restoring soil fertility, secondary forests contribute over 20% of farmers' income through products such as charcoal, fruit, game animals and firewood for on-farm processing. Econometric analysis shows that slow rates of population growth and increases in agricultural incomes through on-farm processing of agricultural products enable farmers to maintain long fallows and result in diversified systems compatible with secondary forest cover in the study area. On the other hand, declining agricultural productivity, subsidized credit, declines in the growth rate of secondary forests and policies favoring speculative land acquisition threaten secondary forest persistence. In older settlement areas, secondary forests are often the only forest resource available to the rural poor. Fallow areas should therefore be managed not only for agricultural productivity, but also for conserving forest resources.     

Detection and quantification of <Emphasis Type="Italic">Tomato mosaic virus</Emphasis> in irrigation waters

A quantitative RT real-time PCR method was developed for the detection and quantification of Tomato mosaic virus (ToMV) in irrigation waters. These have rarely been monitored for the presence of plant pathogenic viruses, mostly due to the lack of efficient and sensitive detection methods. The newly developed method presented here offers a novel approach in monitoring the health status of environmental waters. ToMV was reliably detected at as low as 12 viral particles per real-time PCR reaction, which corresponds to the initial concentration of approximately 4.2 × 10^?10 mg (6,300 viral particles) of ToMV per ml of sample. The sensitivity of the method was further improved by including the Convective Interaction Media^® (CIM) monolithic chromatographic columns for quick and efficient concentration of original water samples. Seven out of nine water sources from different locations in Slovenia tested positive for ToMV, after concentrating the sample. Four samples tested ToMV-positive without the concentrating procedure. The presence and integrity of infective ToMV particles in the original sample, as well as in the chromatographic fraction, was confirmed using different methods from test plants, DAS ELISA to electron microscopy and real-time PCR. In this study, we propose a unique and simple diagnostic scheme for rapid, efficient, and sensitive monitoring of irrigation waters that could also be adopted for other plant, human or animal viruses.     

Characterization of a novel type of MLSB resistance plasmid from Staphylococcus saprophyticus carrying a constitutively expressed erm(C) gene

An erm(C)-carrying plasmid of unusual size and restriction map, designated pSES22, was identified in a Staphylococcus saprophyticus strain and sequenced completely. Constitutive expression of the erm(C) gene from pSES22 is based on a novel 22-bp tandem duplication in the erm(C) translational attenuator. Comparative analysis of the deduced Erm(C) amino acid sequence revealed that Erm(C) from pSES22 - together with an Erm(C) methylase from S. hyicus - represented a separate branch in the homology tree of Erm(C) methylases. Structural comparisons showed that plasmid pSES22 differed distinctly from all other completely sequenced erm(C)-carrying resistance plasmids. However, pSES22 was similar to several members of a diverse group of small plasmids, all of which carried closely related plasmid backbones consisting of the genes repU and pre/mob, but differed in their resistance genes.     

Primary infundibular stenosis and pedigree analysis in three Golden Retriever littermates

Three eight-week-old Golden Retriever puppy littermates were evaluated because of left basilar systolic murmurs and were diagnosed with primary infundibular stenosis. Pedigree analysis in this line was also performed to identify a mode of inheritance. All dogs were asymptomatic at the time of diagnosis; two of the three had congenital lesions in addition to primary infundibular stenosis. Two additional affected dogs were identified in the line, and pedigree analysis suggested an autosomal recessive mode of inheritance. Another, unrelated golden retriever was also identified with isolated infundibular stenosis in the record database. Primary infundibular stenosis should be considered in the differential diagnoses for golden retriever dogs with a left basilar systolic murmur, and is often associated with complex congenital cardiac disease. Primary infundibular stenosis may worsen in severity with time, and in this line of dogs an autosomal recessive pattern of inheritance is likely.     

Paratuberculosis in a miniature donkey (Equus asinus f. asinus)

Paratuberculosis is mainly an infectious disease of ruminants with worldwide distribution. Infection occurs in early stages of life. Other animal species beyond ruminants are rarely affected, however, experimental and natural infections are possible. A case of paratuberculosis in a miniature donkey (Equus asinus f. asinus) with typical clinical and pathomorphological changes is reported here. Lesions were mainly observed in the intestine. Causative for the profuse diarrhoea with emaciation was massive diffuse granulomatous enteritis involving large quantities of acid-fast organism mainly in macrophages. Granulomatous inflammation with acid-fast bacilli again in macrophages to a lesser degree could be detected in the liver. Mycobacterium avium subsp. paratuberculosis (MAP) was isolated from intestinal contents after an incubation period of four weeks. MAP-specific DNA (IS900 and f57) was detected by polymerase chain reaction in culture material. Additionally MAP-isolates were characterized by multi-target genotyping (MIRU-VNTR- and MLSSR-typing). Isolates belonged to the Type II group and exhibited a unique genotype different from other MAP strains in Germany. The donkey originated from a donkey breeding farm in France with intensive free ranging cattle in the neighbourhood and could have been infected there. Donkeys should be considered as paratuberculosis-susceptible animals in exceptional cases and as possible reservoirs or disseminators of infection.     

Effect of varied soil nitrogen supply on growth and nutrient uptake of young Norway spruce plants grown in a shaded environment

To understand the effect of increased soil N supply on tree growth and nutrient uptake, three-year-old Norway spruce seedlings were grown in pots on low-nutrient mineral forest soil supplemented with N in mineral or organic form. Outdoor shaded growth conditions were used, to test the hypothesis that shaded plants are particularly susceptible to high soil N supply. Plants were harvested eleven months after planting. Shoot growth was not affected by the N supply, but N concentrations in needles and roots were increased in plants supplied with mineral N (150 or 300 mg N [kg soil]^—1). Root growth was drastically reduced and root/shoot ratios were decreased in plants with higher N uptake. A high supply of mineral N to soil also decreased the concentrations of other essential elements (P, K) in the needles and thus had effects on plant growth which may impair the stress resistance of trees. Organic N in the form of keratin (150 mg N [kg soil]^—1) did not influence plant growth significantly. The adverse effects of high mineral N supply were particularly pronounced under shaded conditions in comparison to results from other experiments using higher light intensity and temperature conditions.     

Besteht das Risiko der Verschleppung der Bakteriellen Ringfäule der Kartoffel durch den Krautschläger?

In 2001 and 2002, two field trials were performed by the Plant Protection Service (PPS) of the Landwirtschaftskammer Weser-Ems in Oldenburg and the Institute for Plant Protection of the Bavarian State Research Center for Agriculture (LfL) in Freising respectively to examine the transmission of the bacterial ring rot pathogen of potato (Clavibacter michiganensis ssp. sepedonicus) by haulm cutting. In the experiment conducted by the PPS in Oldenburg a lawn-trimmer was used to simulate haulm cutting, before a bacterial suspension was sprayed on the ends of the cut haulms. Two cultivars (early and late) were tested and also the effect of an additional chemical measure for haulm destruction on the transmission of the pathogen was determined. In the trial performed at the LfL in Freising plots with infected plants for the contamination of the haulm cutter were treated immediately prior to plots with healthy plants. Infections of stems (re-growth) and tubers of the plants were determined by polymerase chain reaction (PCR) and indirect immunofluorescence antibody staining (IFAS). In the trials conducted with the haulm cutter, ring rot could be detected in the re-growth of 60% of the plants derived from healthy tubers 4 weeks after haulm cutting. It was confirmed in a bioassay, that the isolated pathogens were viable and virulent. Although the ring rot pathogen was transmitted to a great extent to the leaf material, no infection of progeny tubers occurred in a total of 450 tested plants. However in general a migration of the transmitted pathogen to the tubers cannot be excluded. Therefore further on it is advisable to clean and disinfect the haulm cutter before each use.     

Untersuchungen zur Übertragung von Clavibacter michiganensis ssp. sepedonicus, dem Erreger der Bakteriellen Ringfäule, in das Kraut von Kartoffelpflanzen

From 1999 to 2001, field trials were carried out to find out weather there is a risk of the causal agent of Bacterial Ring Rot of potato (Clavibacter michiganensis ssp. sepedonicus) to be transmitted to the leaves of healthy potato plants via contaminated machinery and equipment during the vegetation period and if so weather the bacteria are transported into the newly formed tubers. Two methods were chosen. Firstly, a sharp-edged metal bar contaminated with a bacterial suspension was drawn through the leaves of potato plants up to 6 times during the vegetation period. Secondly, a suspension of the pathogen was directly injected into the stems of potato plants. The harvested tubers were tested in all trials, leaves were additionally tested in the trial with the contaminated metal bar. The pathogen was not found in any trial. Therefore the risk for the transmission of the Ringrot agent to the leaves of potato plants with contaminated machinery might be very low.     

Die neue Datenbank ALPS-BBA — der komfortable, schnelle Weg zu Informationen über Alternativen zum chemischen Pflanzenschutz für Erzeuger und Berater

With the database ALPS-BBA (http://ALPS.BBA.de), the Federal Biological Research Centre for Agriculture and Forestry (BBA) contributes to promoting integrated pest management and to the necessary extent of applying plant protection products in crop farms. ALPS-BBA offers a comfortable way to search for combinations of crops and pests, possible specific measures, and for key words. Running free text search is also possible. The free text search, in particular, has a great potential for random queries. Web front end and layout allow intuitive navigation, and one can say that search is barrier-free. The database provides information for users who are able to determine crops and pests. Therefore diagnostic aids are not included. Specialised scientists will permanently improve and update the database.