Influence of morphometric parameters on the size of collateral ligaments of the distal interphalangeal joint of equines

The physiological measurements of collateral ligaments of distal interphalangeal joint (CL-DIPJ) differ in the literature. The factors that influence these differences are not well described. The aims of this study are to compare CL-DIPJ sizes in equines with different withers height, as well as to correlate body weight and hoof size to the size of these ligaments. In total, 52 horses were used in the study. They were divided into two groups according to wither height: Group 1 (G1) - 21 animals with up to 147 cm - and group 2 (G2) - 21 animals with greater than 148 cm. CL-DIPJ was ultrasonographically measured in order to find the mean of dorso-palmar (DPD) and latero-medial (LMD) diameters and the cross-sectional area (CSA). Hoof width and length were measured, and the results were used to calculate the hoof surface area. Withers height and body weight were also measured. Groups were statistically compared by Student's t test and Pearson's correlation application to each group. Groups were different in body size, HS and CL-DIPJ size when p < .05, except for the LMD of the medial collateral ligament of left thoracic limb. Withers height and body weight did not show significant correlations to CL-DIPJ size in G1, but they had little influence on the size of CL-DIPJ on G2. No correlation between the hoof size and the CL-DIPJ was noted in any of the two groups. In conclusion, the CL-DIPJ were larger in taller horses and their sizes were correlated to their height and weight, but they were not correlated to hoof size.     

Maize participatory breeding in Portugal: Comparison of farmer's and breeder's on‐farm selection

“VASO” is a Portuguese participatory maize breeding project (1984), where several maize landraces such as “Pigarro” have been selected both by a farmer's (phenotypic recurrent selection) and a breeder's approach (S2 lines recurrent selection). The objectives of this study were to determine the phenotypic and genotypic responses to participatory selection using these two different approaches, to clarify to which extent both selection methods preserve genetic diversity, and conclude what is the preferred method to apply in sustainable farming systems. The results, obtained via ANOVA, regression analyses and molecular markers, indicate that for both selection methods, genetic diversity was not significantly reduced, even with the most intensive breeder's selection. Although there were some common outputs, such as the determinated versus indeterminated ears, cob and ear weight ratio per ear and rachis 2, specific phenotypic traits evolved in opposite directions between the two selection approaches. Yield increase was only detected during farmer selection, indicating its interest on PPB. Candidate genes were identified for a few of the traits under selection as potential functional markers in participatory plant breeding.     

NPK farm-gate nutrient balances in dairy farms from Northwest Portugal

Farm-gate nutrient balances (N, P and K) were analysed in three groups of dairy farms from NW Portugal – medium, intensive and very intensive farms – during 3 consecutive years, 2003, 2004 and 2005. Results showed that the N surplus per hectare with values between 200 and 850 kg N ha⁻¹ was positively correlated with the milk production per ha and the stocking rate of the farm, whereas the P and K surpluses showed fewer variations between groups. In all farms the main inputs were the mineral fertilizers and the feed concentrates whereas milk was the main output. Farmers involved in the study were advised in terms of nutrient management and significant decreases in the nutrient surpluses were observed during the 3 years study, mainly due to a decrease of the inputs, namely fertilizers. We conclude that advisory campaigns among farmers are efficient to reduce the nutrient surpluses. The N losses via NH₃ emissions at farm scale were also estimated accordingly to IPCC emission factors and it appeared that such losses were significant and had to be considered together with the nutrient surpluses when strategies to enhance nutrient management are defined. On average, higher N surplus per hectare were observed in the studied dairy farms from NW Portugal relatively to other European regions, but NW Portugal present lower N surplus per production unit (kg milk) as well as higher N efficiency. Nevertheless, a target limit of 450 kg N ha⁻¹ for N surplus should be easily reached as a first step by most of the farms of NW Portugal by improving nutrient management at farm scale. However, more efforts will be necessary to reduce NPK surplus and NH₃ emissions to the mean values in a per hectare basis found in other European dairy regions with less intensive systems.     

Comparative growth performance of two Nile tilapia (Chitralada and Red-Stirling), their crosses and the Israeli tetra hybrid ND-56

Growth performance of two Oreochromis niloticus strains, Chitralada and Red‐Stirling, their reciprocal crossbred and the Israeli tetra‐hybrid ND‐56 were assessed in net cages under on‐farming conditions. Throughout 268 days of grow‐out, the strains were weighed monthly and mortality, feed consumption and water quality were recorded. Ten rigid net cages (1.5 × 1.5 × 1.7 m) immersed in a 10 ha reservoir were linearly arranged near the reservoir outlet following a completely randomized design with two replicates for each treatment (strain). Each cage was stocked with 459 fish (120 fish m^?3) and fed twice daily to apparent satiation with a commercial tilapia diet following the recommended feeding program. The final mean weights were higher for Chitralada (557.20 g) and the reciprocal crossbreds (522.95, 496.40 g) than those of Red‐Stirling (421.90 g). All treatments outperformed the ND‐56 tetra hybrid. Daily growth showed statistical differences between Chitralada (2.04 g) and Red‐Stirling (1.52 g) but they were statistically the same when compared with the reciprocal crossbreds (1.90, 1.80 g). The relative growth ratios showed the same trend observed in the results for daily growth. The mean survival rate was 98%. The overall growth rate showed that crossbred performed as well as the parental lines. All crossbred progeny presented red colouration with variable pattern of black marks corroborating the dominant inheritance of the red trait in Red‐Stirling strain.     

Identification and analysis of single nucleotide polymorphisms (SNPs) in citrus

Most of the cultivated species of citrus have narrow genetic basis. Relationships among species and cultivars are obscured by sexual compatibility, polyembryony, apomixis and a high incidence of somatic mutations. DNA analysis is crucial in genetic studies not only for citrus breeding programs but also for characterization of hybrids and species. In this paper, single nucleotide polymorphisms (SNPs) were investigated in 58 accessions of Citrus, hybrids and related genera. Genomic sequences of Pêra IAC sweet orange (Citrus sinensis L. Osbeck) were used for primer design and selection of sequence tagged sites (STSs) for identification of SNPs. Analysis of 36 STSs showed identical sequences among 40 of the 41 sweet orange accessions studied. However, these accessions were heterozygous for many SNPs. Ten selected STSs were analyzed in 17 additional accessions from 13 species and hybrids. Comparing to the Pêra IAC sweet orange accession, a total of 150 polymorphic nucleotides were identified and most of the alterations were transitions (52.7%). The greatest number of SNPs was observed in Poncirus trifoliata (L.) Raf. and the smallest in Ponkan mandarin (Citrus reticulata Blanco). At the intra-specific level, Baía Gigante (Citrus sinensis L. Osbeck) was the only sweet orange accession with a divergent SNPs genotype, which corroborates the hypothesis of a hybrid origin for this accession. Although the STSs analyzed represent randomly sampled genomic sequences, they provided consistent information about the level of polymorphism and showed the potential of SNPs markers for characterization and phylogenetic studies.     

Evaluation of different extenders for the cold storage of meagre (Argyrosomus regius) semen

Meagre (Argyrosomus regius) is considered a potential candidate for aquaculture diversification in southern Europe. The main objective of this experiment was to develop a cold storage protocol for meagre semen to facilitate artificial reproduction techniques. Three extenders (non‐activating medium, 0.9% NaCl, and 0.9% NaCl with glycine and glucose) in three different sperm:extender dilutions (1:4, 1:9 and 1:19) were tested in a full factorial design. The quality parameters assessed along the storage time were the sperm motility, viable sperm percentage, adenosine triphosphate (ATP) content, and bacterial growth. The 0.9% NaCl and 0.9% NaCl with glycine and glucose extenders and the 1:4 and 1:9 dilutions maintained a higher sperm motility and a higher sperm linearity for a longer period time. Sperm viability was maintained at a higher value over a longer period with the 0.9% NaCl and 0.9% NaCl with glycine and glucose extenders. Sperm motility and viability appeared to be the main parameters showing the loss of semen quality during cold storage. Meagre semen demonstrated an ability to be stored for up to 10 days at 4°C when using 0.9% NaCl in a 1:4 dilution. These results contribute to a better understanding of the causes of fish semen quality deterioration during cold storage.     

Pathogenic and molecular comparison of Puccinia kuehnii isolates and reactions of sugarcane varieties to orange rust

Sugarcane orange rust, a disease caused by Puccinia kuehnii, was first reported in Brazil in 2009. There are no studies comparing the Brazilian P. kuehnii collections and the reaction of important sugarcane varieties under controlled conditions. This work compared the reaction of seven sugarcane varieties inoculated with six different P. kuehnii isolates from Brazilian sugarcane areas and verified the pathogenic and genetic variability of these isolates. The incubation (I) and latency (L) disease periods, disease severity (SEV), total number of lesions (TNL), total number of sporulating lesions (TNSL), and percentage of sporulating lesions (%SL) were evaluated. Furthermore, ITS1 and IGS ribosomal sequences of all P. kuehnii isolates used in this study were compared with pathogen sequences from 13 different countries. The disease incubation ranged from 7 to 10 days and the latency ranged from 10 to 21 days. SEV and TNL showed large variations and few significant differences between the reaction of the varieties to P. kuehnii, in contrast with the variables TNSL and %SL. The P. kuehnii isolates did not compose different virulent races, but the isolate from one site (Araras) was a more aggressive race. The ITS1 and IGS ribosomal sequences of six P. kuehnii isolates were identical with each other and to most P. kuehnii American sequences deposited at GenBank. The studied sequences of P. kuehnii isolates differed from the sequences from Asia, Tahiti and Oceania.     

Pathogenic diversity of Phytophthora sojae pathotypes from Brazil

Phytophthora root and stem rot has developed in commercial soybean fields since 2006 in Brazil, and cultivars with resistance to this disease have not been targeted for this region. Thus, the Phytophthora sojae pathotypes are expected to have virulence to few if any of the Rps genes. The objectives of this study were to characterize the pathotype diversity of P. sojae in Brazil, determine the distribution of the pathogen and predict which Rps genes will be effective and should be used in breeding programs. Isolates were collected in six states (Rio Grande do Sul, Santa Catarina, Paraná, Mato Grosso do Sul, Minas Gerais, and Goiás). The virulence formulae were based on the response of a differential set with 14 Rps genes (1a, 1b, 1c, 1d, 1k, 2, 3a, 3b, 3c, 4, 5, 6, 7, and 8). None of the 17 pathotypes found was reported previously. The most common virulence formulas were: 1d, 2, 3c, 4, 5, 6, 7 (octal code 05471, representing 24 % of the occurrences); 1d, 2, 3b, 3c, 4, 5, 6, 7 (05671, 13 %); 1b, 1d, 2, 3a, 3c, 4, 5, 6, 7 (25571, 8 %); and 1d, 3a, 5, 7, 8 (01123, 8 %). Percentages of isolates with a susceptible interaction with each Rps gene was Rps1a (3 %), Rps1b (11 %), Rps1c (3 %), Rps1d (100 %), Rps1k (3 %), Rps2 (86 %), Rps3a (32 %), Rps3b (19 %), Rps3c (73 %), Rps4 (70 %), Rps5 (89 %), Rps6 (59 %), Rps7 (100 %), and Rps8 (22 %). There was apparently no relationship between pathotypes and origin. Stacking resistance genes Rps1a, Rps1b, Rps1c, and Rps1k with Rps3b or Rps8 would be highly effective for soybean cultivars targeted for Brazil.     

Use of Extensibility to Measure Corn Tortilla Texture

An objective extensibility test was evaluated to measure texture of corn tortillas. A tortilla strip is pulled apart by a tensile force during the test. Force at 1 mm deformation, force required to rupture the tortilla strip, modulus of deformation, and extensibility distance were correlated to subjective rollability and flexibility scores. Hard, firm tortillas required more force to deform and to rupture and had greater moduli of deformation than soft, flexible tortillas. Tortilla texture was affected by manufacturer of commercial tortillas and by aging. The coefficient of variation ranged from 6.0 to 16.7% for force at 1 mm deformation and work required to rupture, respectively. The extensibility technique is sensitive, fast, simple, and repeatable.     

Effects of Different Drying Processes on Oil Absorption and Microstructure of Tortilla Chips

Tortilla chips were slow dried after baking and then fried in fresh soybean oil. Control chips were not dried before frying. Final oil content of sun-dried tortilla chips was significantly (P < 0.05) lower than those receiving the control treatment. As a result of drying, the structure of the tortilla chips was tighter before frying but expanded significantly during frying. An attempt was made to produce tortilla chips with the same characteristics of the sun-dried chips using impinging hot-air drying techniques. Results indicated that tortilla chips drying rate was mostly affected by air temperature; texture was crispier at higher air temperatures; shrinkage of the piece was higher at lower convective heat transfer coefficient; and microstructure looked smoother at higher air temperature.