Karyotype analysis of interspecific fusants of basidiomycetes by pulsed-field gel electrophoresis

The purpose of this research was to analyze the karyotype of the interspecific fusants of twoPleurotus species. Auxotrophic mutants derived from the cultivated strain ofP. ostreatus andP. cornucopiae were used. Protoplasts were fused electrically, and the fusants were selected under auxotrophic complementation. Esterase isozyme analysis showed that several fusants had isozyme bands originating from both parental strains, and others had unilateral isozyme bands. The fusant that had expressed isozyme bands of both parental strains showed chromosomal DNA bands of both of the parental strains in pulsedfield gel electrophoresis analysis. Despite the above results, the chromosomal composition of the fusants obtained by the pulsed-field gel electrophoresis did not exhibit all of the bands of both fusion parents.     

High-resolution mapping revealed a 1.3-Mbp genomic inversion in Ssi1, a dominant semidwarf gene in rice (Oryza sativa)

Dwarf or semidwarf characters are an important trait for crop breeding as they provide lodging resistance. The rice mutant line DMF-1 has a dm-type semidwarf phenotype and high-lodging resistance controlled by the dominant gene, Short second internode 1 ( Ssi1 ). To elucidate the mechanism of reducing culm length in DMF-1, we sought to identify the Ssi1 gene by positional cloning using the chromosome segment substitution line as a crossing parent. As a result of high-resolution mapping, we found a 1.3-Mbp genomic inversion and a newly arranged gene in the Ssi1 locus. In this study, we report the high-resolution mapping and physical mapping of Ssi1 . We also discuss the possible function of a novel rearranged Ssi1 gene for the dominant dm-type semidwarf phenotype.     

Variation in heading date conceals quantitative trait loci for other traits of importance in breeding selection of rice

To identify quantitative trait loci (QTLs) associated with the primary target traits for selection in practical rice breeding programs, backcross inbred lines (BILs) derived from crosses between temperate japonica rice cultivars Nipponbare and Koshihikari were evaluated for 50 agronomic traits at six experimental fields located throughout Japan. Thirty-three of the 50 traits were significantly correlated with heading date. Using a linkage map including 647 single-nucleotide polymorphisms (SNPs), a total of 122 QTLs for 38 traits were mapped on all rice chromosomes except chromosomes 5 and 9. Fifty-eight of the 122 QTLs were detected near the heading date QTLs Hd16 and Hd17 and the remaining 64 QTLs were found in other chromosome regions. QTL analysis of 51 BILs having homozygous for the Koshihikari chromosome segments around Hd16 and Hd17 allowed us to detect 40 QTLs associated with 27 traits; 23 of these QTLs had not been detected in the original analysis. Among the 97 QTLs for the 30 traits measured in multiple environments, the genotype-by-environment interaction was significant for 44 QTLs and not significant for 53 QTLs. These results led us to propose a new selection strategy to improve agronomic performance in temperate japonica rice cultivars.     

Protective effect of floor cover against soil erosion on steep slopes forested with <Emphasis Type="Italic">Chamaecyparis obtusa</Emphasis> (hinoki) and other species

 We evaluated the protective effects of floor cover against soil erosion in three types of forest located on steep slopes under a humid climate: 22- and 34-year-old Chamaecyparis obtusa (hinoki), 34-year-old Cryptomeria japonica (sugi), and 62-year-old Pinus densiflora (red pine) stands. We measured sediment transport rates (sediment mass passing through one meter of contour width per millimeter of rainfall), using sediment traps, before and after removing floor cover. Raindrop splash erosion was dominant in the experimental stands. Floor cover percentage (FCP) during the preremoval stage varied from 50% to 100% among the four stands, and sediment transport rates ranged from 0.0079 to 1.7 g m⁻¹ mm⁻¹. The rates increased to 1.5–5.6 g m⁻¹ mm⁻¹ immediately after removing floor cover, and remained high throughout the experiment. The presence of physical cover near the ground has a crucial effect on sediment transport on forested slopes. The protective effect ratio (the ratio of the sediment transport rate in a control plot to that in the removal plot) in a young hinoki stand, in which the FCP decreased markedly, was 0.3 at most, which is close to the rate for bare ground. The protective effect ratio in the red pine stand was ≤0.003. We concluded that the protective effect of floor cover in undisturbed forests in Japan differs by over two orders of magnitude, based on comparisons with previous studies. Received: March 11, 2002 / Accepted: August 16, 2002 Present address: Department of Forest Site Environment, Forestry and Forest Products Research Institute, Ibaraki 305-8687 Japan Tel. +81-298-73-3211; Fax +81-298-74-3720 e-mail: miura@affrc.go.jp Present address: Department of Forest Site Environment, Forestry and Forest Products Research Institute, Ibaraki 305-8687 Japan Tel. +81-298-73-3211; Fax +81-298-74-3720 e-mail: miura@affrc.go.jp Acknowledgments This study was supported by the Research Council of the Ministry of Agriculture, Forestry, and Fisheries, of Japan. We thank H. Ujihara, S. Ujihara, and M. Ogasawara in Otoyo, Kochi, who provided the experimental stands used in this study. We also thank K. Hirai, S. Kuramoto, E. Kodani, and the rest of the staff at the Shikoku Research Center, Forestry and Forest Products Research Institute, for their help in conducting the experiments. Correspondence to:S. Miura     

Antioxidant constituents in distillation residue of Awamori spirits

Constituents in a distillation residue of Awamori (millet spirits) and their antioxidant activity are investigated in this study. The supernatant of the distillation residue obtained by centrifugation was partitioned with n-hexane, chloroform, ethyl acetate, and n-butanol against water to afford the corresponding solubles. Among them, n-hexane and chloroform solubles showed higher antioxidant potency than l-ascorbic acid by the bleomycin-Fe method. In chloroform solubles, seven cyclic dipeptides were identified along with ethyl 2-pyrrolidione-5-carboxylate, tyrosol, and ethyl p-hydoroxyphenyllactate. Antioxidant activity of ethyl p-hydoroxyphenyllactate was 4.2 times that of l-ascorbic acid, whereas cyclic dipeptides showed activity 0.89-1.29 times as strong as that of l-ascorbic acid. On the other hand, scavenging effect of cyclic dipeptides against O(2)(-.) and OH(.) by using electron spin resonance was also investigated. In the results, cyclo(l-Ile-l-Pro) showed significantly strong inhibitory effect against OH(.) (95.4% at 2.5 x 10-3 M) and cyclo(l-Phe-l-Pro), cyclo(l-Pro-l-Val), and cyclo(l-Leu-l-Pro) inhibited OH(.) 64.9, 54.1, and 51.0%, respectively, whereas alpha-tocopherol showed 37.7% inhibition, though only a few cyclic dipeptides weakly inhibited O(2)(-.).     

Effect of reduced tillage on weeds and soil organisms in winter wheat and summer maize cropping on Humic Andosols in Central Japan

Although reduced tillage (RT) may preserve soil biota and improve the productivity and sustainability of arable lands in temperate regions, the extension of RT is limited by difficulties in controlling weeds. We studied the effect of RT without herbicide application on weed communities and soil biota in a 1-year 2-crop rotation system with winter wheat (Triticum aestivum L.) and maize (Zea mays L.) on Andosols in Japan. RT of the surface 3 cm and conventional moldboard plowing (CT) were conducted before seeding twice per year. For the first 3 years, from autumn 1997 to spring 2000, one field was managed with RT and another with CT. For the second 3 years, from autumn 2000 to spring 2003, RT and CT were conducted in two replicated plots in each field. Weed communities and soil biota were studied in the last 2 years. Dominant weed species in winter wheat cropping were Italian ryegrass (Lolium multiflorum Lam.) in 2002 and common vetch (Vicia angustifolia L.) in 2003, and their biomass was high where RT or CT was continuously conducted. Switching of tillage methods, from RT to CT or vice versa, reduced the biomass of winter weeds. In summer maize cropping, several annual and perennial weed species tended to increase under RT in the second 3 years. However, redroot pigweed (Amaranthus retroflexus L.), the most dominant weed in 2002 and 2003, responded to tillage inconsistently and its biomass was not always increased by RT. Species diversity of winter weeds was decreased by CT conducted in the first 3 years, and that of summer weeds was decreased by CT conducted in the second 3 years. The seedbank in the 0–10-cm soil layer under recent RT was large (7200–16 300 seeds m⁻²) compared with that under CT (2900–7300 seeds m⁻²). The microbial substrate-induced respiration (SIR) and the population densities of nematodes and mites were higher under RT in the second 3 years and were not affected by previous tillage practices. Both were highly correlated with soil total nitrogen. The positive effect of RT on these soil organisms was primarily attributable to the accumulation of organic matter in soil, but not to plant cover as a result of incomplete weed control by RT. Occasional adoption of RT in current CT systems may be effective at enriching soil organisms with little risk of weed infestation.     

Ten-year evapotranspiration estimates in a Bornean tropical rainforest

This study was undertaken to quantify interannual variations of total evaporation (ET) in a tropical rainforest in Sarawak, Malaysia. To this end, we conducted 10-year meteorological measurements and formulated a simplified big-leaf model that reproduces transpiration (Et), rainfall interception (Ei), and ET as the sum of these. The model was validated independently using eddy covariance fluxes, rainfall interception based on throughfall and stemflow measurements, and sap flow measurements conducted for more than 2 years. Using the model, Et, Ei, and ET were estimated for the period 2000-2009. Annual Et, Ei, and ET averaged over 10 years were estimated as 1114, 209, and 1323 mm, respectively, with small seasonal fluctuations. The derived estimates showed conservative year-to-year variations in annual Et, Ei, and ET (CV = 5-7%) in contrast to considerable year-to-year variations in annual rainfall (CV = 11%). Specific rainfall characteristics (e.g. intense short duration storms) at this site can explain the conservative year-to-year Ei variations. Small interannual variations in meteorological conditions and absence of severe drought during the study period can explain the small year-to-year Et variations. To characterize ET at our site, we also compared Ei and ET at our site with those of other tropical forests. Based on the derived ET characteristics, we discuss possible ET changes in response to changes in rainfall regime at this site.     

Seroepidemiological survey of distemper virus infection in the Caspian Sea and in Lake Baikal

Forty Caspian seals were surveyed seroepidemiologically between 1993 and 1998 around the times of mass mortality that occurred in 1997 in the Caspian Sea and seven Baikal seals were also surveyed in 1998. Virus neutralizing tests and ELISA clearly suggested that distemper virus epidemic was caused in Caspian seals before the spring of 1997 and that CDV infection continued to occur in Lake Baikal in recent years.