Epizootiology of Renibacterium salmoninarum, the causal agent of bacterial kidney disease in salmonid fish

Abstract. By use of a selective medium, Renibacterium salmoninarum was recovered from rainbow trout, Salmo gairdneri Richardson. With asymptomatic animals, small numbers of Renibacterium colonies were recovered only from the anterior part of the kidney; whereas in clinically diseased fish, dense pure culture growth was obtained from kidney, spleen, heart, blood, ascitic fluid and faeces. There was no evidence for the presence of R. salmoninarum in the water or sediment of 56 freshwater fish farms in England and Wales. Nevertheless, laboratory–based experiments showed that the pathogen was excreted in the faeces of clinically diseased fish. Moreover, there was survival of the bacterial cells for up to 21 days in sediment/faecal material.     

Relative potencies of natural estrogens on vitellogenin and choriogenin levels in the Indian freshwater spotted snakehead, <Emphasis Type="Italic">Channa punctata</Emphasis>: in vivo and in vitro studies

The relative efficacies of three natural estrogens viz., estrone (E₁), estradiol-17β (E₂) and estriol (E₃) to induce synthesis of vitellogenin (Vg) and choriogenin (Chg) were assessed in primary hepatocyte cultures of the Indian freshwater spotted snakehead, Channa punctata. Hepatocytes were isolated from the spotted snakehead liver by a non-enzymatic protocol. Optimum culture conditions were standardized for ensuring their viability and functioning. Isolated hepatocytes were cultured for 48 h for monolayer formation and then exposed to various concentrations (0.001–10 μM) of the three estrogens. Competitive homologous ELISAs, developed and validated for spotted snakehead Vg and Chg were employed to determine the amounts of these two proteins secreted into the culture medium after 48 h of incubation. The results reveal that although all the three estrogens were effective in inducing the production of Vg and Chg in a dose-dependent manner, there were differences in their relative potencies. Of three estrogens, E₁ was the least potent and could induce synthesis of Vg and Chg only at a minimum concentration of 0.5 μM; whereas significant levels of both the proteins were quantified in culture medium by exposing the hepatocytes to E₂ or E₃ even at a concentration of 0.001 μM. All three estrogens were effective in inducing synthesis of Vg and Chg in vivo also. These results suggest the possibility of employing the above in vitro experimental design to monitor the presence of estrogens/estrogen-like chemicals in natural waters, which could interfere with the estrogen receptor system of fish. This study further points to the possibility of using Chg, in addition to Vg, as a parameter for screening various chemicals for their estrogenic activity.     

Cannibalism among <Emphasis Type="Italic">Lithodes santolla</Emphasis> (Molina 1782) juveniles: effect of stocking density,stage and molt condition

Losses of king crabs (deaths) in massive rearing conditions are frequently attributed to cannibalism. As several factors could influence cannibalism intensity during culture, the aim of the present study was to determine the effect of molt condition, stage and density on cannibalism among Lithodes santolla juveniles. Comparisons between intermolt and molt conditions and between C1 and C2 stages during intermolt were performed at three densities (6, 12 and 18 individuals per flask; that is equivalent to 236, 472 and 708 individuals m^?2). After 16 days of juvenile coexistence, cannibalism (injured + dead) was higher during molting (33.9 ± 4.5 %) than intermolt (21.7 ± 3.9 %), even though only 36 % of crabs had molted. Although cannibalism was similar in C1 and C2 stages, the proportion of dead animals was higher by a factor of three in C1 stage, probably due to the fact that animals reach the first juvenile stage with low energetic reserves, after the lecithotrophic larval development. Density was the main factor influencing cannibalism in our experiments. Higher densities promoted higher deaths, while agonistic interactions evidenced by injured crabs remained constant. Walking appendages were lost more often than chelipeds during first agonistic encounters. We recommend the use of intermediate densities (450 crabs m^?2 at most), the early detection of exuviae and the sorting of crabs after molting, for L. santolla rearing.     

Comparative pathogenicity study of ten different betanodavirus strains in experimentally infected European sea bass,Dicentrarchus labrax (L.)

Viral encephalopathy and retinopathy (VER), otherwise known as viral nervous necrosis (VNN), is a severe pathological condition caused by RNA viruses belonging to the Nodaviridae family, genus Betanodavirus. The disease, described in more than 50 fish species worldwide, is considered as the most serious viral threat affecting marine farmed species in the Mediterranean region, thus representing one of the bottlenecks for further development of the aquaculture industry. To date, four different genotypes have been identified, namely red‐spotted grouper nervous necrosis virus (RGNNV), striped jack nervous necrosis virus (SJNNV), tiger puffer nervous necrosis virus and barfin flounder nervous necrosis virus, with the RGNNV genotype appearing as the most widespread in the Mediterranean region, although SJNNV‐type strains and reassortant viruses have also been reported. The existence of these genetically different strains could be the reason for the differences in mortality observed in the field. However, very little experimental data are available on the pathogenicity of these viruses in farmed fish. Therefore, in this study, the pathogenicity of 10 isolates has been assessed with an in vivo trial. The investigation was conducted using the European sea bass, the first target fish species for the disease in the Mediterranean basin. Naive fish were challenged by immersion and clinical signs and mortality were recorded for 68 days; furthermore, samples collected at selected time points were analysed to evaluate the development of the infection. Finally, survivors were weighed to estimate the growth reduction. The statistically supported results obtained in this study demonstrated different pathogenicity patterns, underlined the potential risk represented by different strains in the transmission of the infection to highly susceptible species and highlighted the indirect damage caused by a clinical outbreak of VER/VNN.     

Inhibition of hirame rhabdovirus growth by RNA aptamers

RNA aptamers are artificial nucleic acids that specifically bind to a wide variety of targets. They are an effective tool for pharmaceutical research and development of antiviral agents. Here, we describe four Hirame rhabdovirus (HIRRV)‐RNA aptamers (H1, H2, H3 and H4) that we obtained from an in vitro process called the systematic evolution of ligands by exponential enrichment (SELEX). The HIRRV‐RNA aptamers specifically bind to HIRRV. Hirame natural embryo (HINAE) cells treated with virus and the RNA aptamer showed a decrease in appearance of cytopathic effect when compared with control (treated only with virus). Rhodovulum sulfidophilum was transformed with genes for the RNA aptamers, and the aptamers were detected in the culture medium, indicating that they were secreted from the cells. Thus, the recombinant R. sulfidophilum might be a powerful tool for the prevention of HIRRV in aquaculture.     

Inherent bias in using aggregate CPUE to characterize abundance of fish species assemblages

We have analyzed the practice of assessing an assemblage of fish species in a multispecies fishery on the basis of aggregate catch per unit effort (CPUE), which is the summed catch of all species per unit of effort. We show that at the onset of fishing or of a large positive or negative change in fishing effort, aggregate CPUE will be hyper-responsive, that is, relative change of aggregate CPUE will be greater than that of aggregate abundance. We also show that as the fishery reaches equilibrium, the aggregate CPUE in most circumstances will continue to be hyper-responsive, with a greater relative change from its value at the start than the aggregate abundance. However, there are less likely circumstances in which the aggregate CPUE will be hyper-stable compared to aggregate abundance. The circumstances leading to hyper-responsiveness or hyper-stability depend on the distribution of productivity and fishery vulnerability parameters among the species in the aggregation.     

粘类小麦雄性不育基因rfv1定向导入的研究

为了研究粘类非1BL/1RS小麦雄性不育基因rfv1定向导入的途径与方法,从而创制粘类非1BL/1RS小麦雄性不育系的新保持系,以非1BL/1RS普通小麦变种莫迦小麦为供体材料,综合农艺性状优良的1BL/1RS易位系(普通小麦品种)西农Fp1为受体材料,采用定向回交置换方法,同时结合根尖染色体镜检和SDS-PAGE检测,将莫迦小麦核基因组中的rfv1不育基因定向导入到西农Fp1的核基因组,完成育性染色体的专一替换,育成既携有来自莫迦小麦核基因组的rfv1不育基因,又具有西农Fp1核背景的粘类非1BL/1RS小麦雄性不育系的新保持系.该方法为杂种优势利用中更好地发挥粘类小麦雄性不育系的实际作用奠定了坚实的技术支撑.     

Enhancing the mineral and vitamin content of wheat and maize through plant breeding

More than half of the world's population suffers micronutrient undernourishment. The main sources of vitamins and minerals (iron, zinc, and vitamin A) for low-income rural and urban populations are staple foods of plant origin that often contain low levels or low bioavailability of these micronutrients. Biofortification aims to develop micronutrient-enhanced crop varieties through conventional plant breeding. HarvestPlus, the CGIAR's biofortification initiative, seeks to breed and disseminate crop varieties with enhanced micronutrient content that can improve the nutrition of the “hard to reach” (by fortification or supplementation programmes) rural and urban poor in targeted countries/regions. In attempting to enhance micronutrient levels in maize and wheat through conventional plant breeding, it is important to identify genetic resources with high levels of the targeted micronutrients, to consider the heritability of the targeted traits, to explore the availability of high throughput screening tools and to gain a better understanding of genotype by environment interactions. Biofortified maize and wheat varieties must have the trait combinations which encourage adoption such as high yield potential, disease resistance, and consumer acceptability. When defining breeding strategies and targeting micronutrient levels, researchers need to consider the desired micronutrient increases, food intake and retention and bioavailability as they relate to food processing, anti-nutritional factors and promoters. Finally, ex ante studies are required to quantify the burden of micronutrient deficiency and the potential of biofortification to achieve a significant improvement in human micronutrient status in the deficient target population in order to determine whether a biofortification program is cost-effective.     

基于SNP标记的小麦高通量身份鉴定模式

为探索小麦品种高通量SNP身份鉴定模式,利用 wheat 90K SNP芯片对380份小麦品种进行了全基因组扫描、分析和评价,从中筛选出高质量、高分辨率、单拷贝和均匀分布的候选SNP标记384个,能将除近等基因系以外的所有品种区分开;基于组合最优化算法,获得小麦品种高通量鉴定最少SNP位点组合一套,包含14个SNP标记,区分能力与384个SNP标记相同。将14个SNP位点转化成KASP标记,分析选取的95份样品,结果显示,芯片平台和KASP平台上的基因分型结果一致。考虑品种实际鉴定过程中存在样本量大、高度近似品种少等情况,权衡准确、经济、灵活、快速、通量高等检测需求,建议品种高通量身份鉴定可采取“核心位点+扩展位点”的模式进行。本研究为小麦等农作物品种SNP高通量身份鉴定技术体系的建立和指纹数据库的构建提供了有利的参考。     

The aetiology of spinal deformity in Atlantic salmon, Salmo salar L.: influence of genetic factors on the frequency and severity in freshwater stages

A radiographic study was carried out on 2-year groups of pre-smolt parr to detect the comparative frequency of vertebral change in a range of defined pedigreed families of high growth rate of Atlantic salmon, Salmo salar L., reared under identical conditions. The observed frequency of deformity was related to the observed deformity level in the seawater parental generation, and to a potentially uncontrolled environmental determinant, i.e. stripping date. High and low parental deformity groups of families were found to produce offspring that had very similar levels of radiographically detectable spinal deformities in the pre-smolt parr, suggesting no genetic link. With regard to stripping date, the overall incidence was nearly half that seen in the preceding year (8.7% cf 16.6%). However, a non-significant trend to fewer radiographic spinal deformities was seen in the later stripping period.