Evaluation of cell wall preparations for proteomics: a new procedure for purifying cell walls from Arabidopsis hypocotyls

Background  

The ultimate goal of proteomic analysis of a cell compartment should be the exhaustive identification of resident proteins; excluding proteins from other cell compartments. Reaching such a goal closely depends on the reliability of the isolation procedure for the cell compartment of interest. Plant cell walls possess specific difficulties: (i) the lack of a surrounding membrane may result in the loss of cell wall proteins (CWP) during the isolation procedure, (ii) polysaccharide networks of cellulose, hemicelluloses and pectins form potential traps for contaminants such as intracellular proteins. Several reported procedures to isolate cell walls for proteomic analyses led to the isolation of a high proportion (more than 50%) of predicted intracellular proteins. Since isolated cell walls should hold secreted proteins, one can imagine alternative procedures to prepare cell walls containing a lower proportion of contaminant proteins.     

Effects of steam-treated rice straw feeding on growth,digestibility, and plasma volatile fatty acids of goats under different housing systems

In order to use rice straw as forage in livestock feeding, the effects of steam-treated rice straw (at 15.5 kgf/cm² for 120 s) feeding on growth performance, plasma volatile fatty acid profile, and nutrient digestibility of goats were determined. Twenty male goats (18.69?±?0.34 kg) were used in an 84-day trial. The goats were divided into four groups of five goats each to receive steam-treated (STRS) or untreated (UTRS) rice straw diet under closed house (CH) and open house (OH) systems. The results revealed that the goats fed with STRS had significantly higher dry matter (DM), organic matter (OM), crude protein (CP), neutral detergent fiber (NDF), and acid detergent fiber (ADF) digestibility; similarly, the average daily weight gain and feed conversion ratio were higher for STRS groups under both CH and OH systems than those for UTRS. The plasma protein and insulin in STRS and cholesterol in UTRS groups was higher (P?P?>?0.05) at 30 days. The plasma amylase, lipase, T₃, T₄ and glucagon at 30 and 60 days were not different (P?>?0.05) among the groups. The plasma acetate, propionate, butyrate, and total volatile fatty acid were higher (P?P?>?0.05) on these parameters. It could be concluded that steam treatment of rice straw at 15.5 kgf/cm² for 120 s increased apparent nutrient digestibility, hence increased the growth and feed efficiency of growing goats.     

Effect of γ (Gamma)-radiation on the physico-mechanical properties of grafted jute fabric reinforced polypropylene (PP) composites

The bleached jute fabric (BJF) reinforced polypropylene (PP) composites with various contents of acrylic acid (AA)-treated BJF and un-AA-treated BJF were fabricated by compression moulding method at 190 °C. The AA-grafted BJF reinforced PP composites were then irradiated by γ-ray at various doses. The mechanical properties of neat PP (N-P), ungrafted-BJF and PP composites (UG-BJFPC), AA-grafted-BJF and PP composites (AA-BJFPC) and γ-ray cum AA-grafted-BJF and PP composites (γAA-BJFPC) show maximum tensile strength (TS) of 30, 46, 47 and 51 MPa, maximum flexural strength (FS) of 34, 49, 50 and 54 MPa and maximum Young’s modulus (E) of 280, 428, 436, and 680 MPa, respectively. The increase of TS, FS and E from UG-BJFPC are 2 %, 2 %, and 2 % for AA-BJFPC and 11 %, 10 % and 59 % for γAA-BJFPC. The TS, FS and E are found to increase with radiation dose up to 500Krad and then decrease. The water absorption (WA) for UG-BJFPC, AA-BJFPC and γAA-BJFPC is respectively about 14, 10 and 9 %, indicating a gradual development of hydrophobic character of the composites first by AA-treatment and then by γ-ray-treatment. AA treatment on jute fabric and gamma irradiation on composite result in significant change of morphology of the jute fabric composites surface and better mechanical bonding between fabric and polymer matrix, as a result improved mechanical properties are found.     

Rhizosphere microbiomes can regulate plant drought tolerance

Beneficial root-associated rhizospheric microbes play a key role in maintaining host plant growth and can potentially allow drought-resilient crop production. The complex interaction of root-associated microbes mainly depends on soil type, plant genotype, and soil moisture. However, drought is the most devastating environmental stress that strongly reduces soil biota and can restrict plant growth and yield. In this review, we discussed our mechanistic understanding of drought and microbial response traits. Additionally, we highlighted the role of beneficial microbes and plant-derived metabolites in alleviating drought stress and improving crop growth. We proposed that future research might focus on evaluating the dynamics of root-beneficial microbes under field drought conditions. The integrative use of ecology, microbial, and molecular approaches may serve as a promising strategy to produce more drought-resilient and sustainable crops.     

Build up of patches caused by Rhizoctonia solani

Rhizoctonia solani is a complex species that is composed of different anastomosis groups (AG). Although these different AGs show differences in their host ranges, generally R. solani is a phytopathogenic species with a wide spectrum of hosts. It has the ability to grow as a saprotroph, which further complicates its behaviour as a parasite. The losses caused by R. solani are very important and need a sustainable management strategy. The patchy appearance of the disease caused by this pathogen is well-known. The patches show within and between season dynamics. The factors which affect the spread of the disease can be grouped into three main categories: host plant, pathogen and environment. However, each of the categories in its detail may depend on or react with the other categories. There are a number of factors that may be involved in dynamics of patches. These potential mechanisms are discussed. It is essential to know about the mechanisms involved to develop an effective control strategy. Although more work is needed to investigate different mechanisms of parasitism deployed by different AGs in different hosts, it seems that many mechanisms external to the host are operating at the same time which necessitates an integrative research approach to study and control the diseases caused by R. solani.     

Salt‐resistant and salt‐sensitive wheat genotypes show similar biochemical reaction at protein level in the first phase of salt stress

Salinity has a two‐phase effect on plant growth, an osmotic effect due to salts in the outside solution and ion toxicity in a second phase due to salt build‐up in transpiring leaves. To elucidate salt‐resistance mechanisms in the first phase of salt stress, we studied the biochemical reaction of salt‐resistant and salt‐sensitive wheat (Triticum aestivum L.) genotypes at protein level after 10 d exposure to 125 mM–NaCl salinity (first phase of salt stress) and the variation of salt resistance among the genotypes after 30 d exposure to 125 mM–NaCl salinity (second phase of salt stress) in solution culture experiments in a growth chamber. The three genotypes differed significantly in absolute and relative shoot and root dry weights after 30 d exposure to NaCl salinity. SARC‐1 produced the maximum and 7‐Cerros the minimum shoot dry weights under salinity relative to control. A highly significant negative correlation (r² = –0.99) was observed between salt resistance (% shoot dry weight under salinity relative to control) and shoot Na⁺ concentration of the wheat genotypes studied. However, the salt‐resistant and salt‐sensitive genotypes showed a similar biochemical reaction at the level of proteins after 10 d exposure to 125 mM NaCl. In both genotypes, the expression of more than 50% proteins was changed, but the difference between the genotypes in various categories of protein change (up‐regulated, down‐regulated, disappeared, and new‐appeared) was only 1%–8%. It is concluded that the initial biochemical reaction to salinity at protein level in wheat is an unspecific response and not a specific adaptation to salinity.     

Effect of 2‐hydroxy‐4‐(methylthio) butanoic acid and acidifier on the performance,chyme pH,and microbiota of broilers

This study was aimed to explore the comparative acidifying properties of 2‐hydroxy‐4‐(methylthio) butanoic acid (HMTBA) and a combination of DL‐methionine (DLM) and acidifier in male broiler production. A total of 480 1‐day‐old broiler chicks were randomly divided into four treatments: A (low HMTBA, 0.057% HMTBA); B (low acidifier, 0.05% DLM + 0.057% acidifier); C (high HMTBA, 0.284% HMTBA); and D (high acidifier, 0.25% DLM + 0.284% acidifier). At 21 d, growth performance, chyme pH, digestive enzyme activities, and intestinal microflora were measured. The pH of crop, gizzard, and ileum contents was higher in the HMTBA treatment group than in DLM + acidifier treatment group. Furthermore, acidifier supplementation promoted growth of butyrate‐producing bacteria such as Faecalibacterium, whereas high HMTBA (0.284%) inhibited the proliferation of acid‐producing bacteria including Roseburia and Collinsella. The chymotrypsin activity was lower in the HMTBA group than in the DLM + acidifier group. In contrast, high‐level HMTBA group showed higher average daily gain and average daily feed intake than the DLM + acidifier group. These results suggested that HMTBA work through different pathways with DLM plus acidifier.