Advanced lentil lines screened for resistance to <Emphasis Type="BoldItalic">Fusarium oxysporum</Emphasis> f. sp. <Emphasis Type="BoldItalic">lentis</Emphasis> under greenhouse and field conditions

Fusarium oxysporum f. sp. lentis is the most important pathogen of lentil plants, and most areas under lentil cultivation are reported to have a fusarium wilt disease background. The plants are infected in the seedling stage and later stages of their development. Fusarium wilt disease, which has appeared at high incidence rates during recent years, has caused sharp drops in the yield, especially in Moghan, in the northwest of Iran. Forty-five isolates of the pathogen were collected from different regions of the country with two isolates from ICARDA in the summer of 2008 and identified using Nelson’s key. The pathogenicity of the collected isolates was studied on a sensitive line (ILL 4605) under greenhouse conditions and significant differences in pathogenicity were found among them. The most pathogenic isolates from three provinces, East Azerbaijan (EA 30), Ardebil (Ar 3) and Khorasan (Kh 45), were selected and used in screening of 55 developed lines under greenhouse and field conditions. In the greenhouse, test plants were inoculated by immersing root tips in spore suspension and sowing seeds in pre-infested pot soil. Field tests were carried out in a naturally highly infested farm. At all stages, the plant response to the disease was based on the percentage of dead plants. Cluster analyses of the greenhouse and field data led to the selection of three lines (81S15, FLIP2007-42 L and FLIP2009-18 L) that were resistant under greenhouse and field conditions.     

Rapid one-step separation and purification of recombinant phenylalanine dehydrogenase in aqueous two-phase systems

Background: Phenylalanine dehydrogenase (PheDH; EC 1.4.1.20) is a NAD+-dependent enzyme that performs the reversible oxidative deamination of L-phenylalanine to phenylpyruvate. It plays an important role in detection and screening of phenylketonuria (PKU) diseases and production of chiral intermediates as well. The main goal of this study was to find a simple and rapid alternative method for purifying PheDH. Methods: The purification of recombinant Bacillus sphaericus PheDH was investigated in polyethylene glycol (PEG) and ammonium sulfate aqueous two-phase systems (ATPS). The influences of system parameters including PEG molecular weight and concentration, pH and (NH4)2SO4 concentration on enzyme partitioning were also studied. The purity of enzyme was analyzed by sodium dodecyl sulfate polyacrylamide gel electrophoresis. Results: A single extraction process was developed for separation and purification of recombinant PheDH from E. coli BL21 (DE3). The optimized conditions for partitioning and purification of PheDH were 9% (w/w) PEG-6,000 and 16% (w/w) (NH4)2SO4 at pH 8.0. The partition coefficient, recovery, yield, purification factor and specific activity values were achieved 58.7, 135%, 94.42%, 491.93 and 9828.88 U/mg, respectively. Also, the Km values for L-phenylalanine and NAD+ in oxidative deamination were 0.21 and 0.13 mM, respectively. Conclusion: The data presented in this paper demonstrated the potential of ATPS as a versatile and scaleable process for downstream processing of recombinant PheDH.     

Identification of QTLs for phenolic compounds in oilseed rape (<Emphasis Type="Italic">Brassica napus L.</Emphasis>) by association mapping using SSR markers

Association mapping identifies quantitative trait loci (QTLs) by examining the marker-trait associations that can be attributed to the strength of linkage disequilibrium between markers and functional polymorphisms across a set of diverse germplasm. In this study, association mapping was performed to detect QTL-linked and genome wide SSR markers linked to phenolic compounds of extraction meal in a population of 49 genetically diverse oilseed rape cultivars of dark-seeded, winter-type oilseed rape accessions. Correction for population structure was performed using 559 genome wide SSR markers. Results showed that seed colour is an important contributor to seed meal quality. Totally, 52 SSR markers linked to phenolic compounds were detected, five of them being QTL linked markers. Some of these markers were already mapped on Brassica napus chromosomes that contain known QTL controlling oilseed rape meal quality traits. Our results demonstrate that association mapping is a useful approach to complement and enhance previous QTL information for marker-assisted selection.     

Interaction Between Salinity Stress and Verticillium Wilt Disease in Three Pistachio Rootstocks in a Calcareous Soil

ABSTRACT

The interaction between soil salinity and infection caused by Verticillium dahliae was studied in pistachio (Pistacia vera) in a greenhouse experiment. Treatments consisted of 0, 1400, 2800, and 4200 mg sodium chloride (NaCl) kg^{? 1} soil and three rootstocks (Sarakhs, Badami, and Qazvini cultivars). They were gradually exposed to salinity stress before and/or after root inoculation with a water suspension of 10⁷ conidia/mL of a pistachio isolate of V. dahliae. Salt stress significantly increased rootstock shoot and root colonization by V. dahliae. All rootstocks were susceptible to V. dahliae, but symptoms of the disease appeared earlier in Sarakhs, a salt sensitive cultivar. Moreover, salinity and V. dahliae interaction increased the concentrations of sodium (Na), potassium (K) and chloride (Cl), but decreased the K/Na ratio in all rootstocks. Shoot and root tissues of inoculated Sarakhs and Qazvini (a salt tolerant) contained the highest and the lowest concentrations of Na, K,and Cl, respectively. In salinity treatments, shoot and root dry weight of all rootstocks decreased as compared with controls. Sarakhs showed smaller shoot and root dry weight than Qazvini and Badami. Also, increasing the NaCl level increased accumulation of Na, K, and Cl in shoot and root of the rootstocks. Sarakhs showed higher concentrations of ions in the shoot and root. Based on shoot and root dry weights and ion accumulation, Sarakhs and Qazvini were susceptible and tolerant to salinity, respectively.     

Microsatellite markers based assessment of genetic diversity in Iranian olive (Olea europaea L.) collections

To study the genetic variation in Iranian olive collections and some foreign olive cultivars, 47 accessions of 18 local cultivars from 6 olive collections of Iran (Roudbar, Zanjan, Ahvaz, Dezful, Kazeroon and Shiraz), were analyzed along with 30 imported cultivars using 16 microsatellite primer pairs. All the used microsatellite loci revealed polymorphism in the studied genotypes, except GAPU14 and GAPU113 markers. Fourteen microsatellite primers amplified 126 polymorphic alleles in the 87 selected olive accessions. The average number of alleles per locus was 9, ranging from 3 to 14. Polymorphic information content (PIC) was 0.85. The genetic similarity based on Jaccard coefficient ranged from 0.15 to 1. The genetic relationships among accessions were investigated using cluster analysis and principal component analysis (PCA). Most of the accessions with the same name were grouped together; some exceptions were also observed. As expected, close relationship was observed among accessions within same cultivar. Most of the Iranian olive accessions were clustered to a main distinct group. Two-dimensional scatter plot of principal component analysis revealed a clear separation of most of the Iranian olives from Syrian and other introduced cultivars. These suggest that Iranian cultivars have different origin related to West Mediterranean basin cultivars and have evolved independently from the others. Between and within Iranian and foreign cultivars (cultivars including three or more accessions) genetic diversity was analyzed using analysis of molecular variance (AMOVA). AMOVA revealed higher within cultivar genetic variation (62.76%) as compare to that between cultivar variations (37.24%). The intra- and inter-cultivar variance tested by permutation test showed significant genetic variation at both levels. The high level within cultivar genetic variance could be due to mislabeling and presence of homonyms in cultivars produced by vegetative propagation from original plants.     

Comparative evaluation of therapeutic efficacy of sulfadiazine-trimethoprim,oxytetracycline, enrofloxacin and florfenicol on Staphylococcus aureus–induced arthritis in broilers

1. Staphylococcus aureus is an important human and veterinary pathogen that causes economic loss in the poultry industry. This study aimed to compare therapeutic efficacy of 4 commonly used antibiotics in poultry on S. aureus–induced arthritis in broilers.

2. Sixty broilers, 8 weeks of age, were assigned at random into 7 groups as follows: (1) negative control (n = 5); (2) vehicle control (n = 5); (3) sulfadiazine-trimethoprim, 250 ml/1000 l drinking water (n = 10); (4) oxytetracycline 20%, 1 mg/l drinking water (n = 10); (5) florfenicol 10%, 1/1000 v/v in drinking water (n = 10); (6) enrofloxacin 10%, 1/1000 v/v in drinking water (n = 10) and (7) positive control (n = 10).

3. Birds in group 2 were injected with 1 ml of sterile TSB medium into the right tibiotarsal joint on d 0 while other birds (except group 1) were challenged with 1 ml of 1.2 × 10¹⁰ CFU/ml suspension of S. aureus bacteria.

4. Antibiotic therapy was started from d 4 post challenge and continued for 5 d. At the end, birds were weighed and clinical severity of arthritis was determined. After blood collection, birds were slaughtered and tibiotarsal and hip joints were evaluated grossly. The content of inflammatory exudates of tibiotarsal joint and the degree of femoral head necrosis were recorded. Mucin clot test and histopathological evaluation were performed on right tibiotarsal joint. Serum interleukin 6 was also assayed.

5. Sulfadiazine-trimethoprim had higher therapeutic efficiency with regard to most of the assayed criteria, whereas none of the antibiotics significantly affected femoral head necrosis and body weight. These data will help clinicians to have better antibiotic choice in field conditions.

     

Polycyclic Aromatic Hydrocarbons in Seawater, Sediment, and Rock Oyster Saccostrea cucullata from the Northern Part of the Persian Gulf (Bushehr Province)

The concentration of polycyclic aromatic hydrocarbons (PAHs) was determined in seawater, sediment, and Rock oyster Saccostrea cucullata collected from four sampling sites in the inter-tidal areas of Bushehr province. The total concentrations of 14 PAHs varied from 1.5 to 3.6 ng/L in seawater, 41.7 to 227.5 ng/g dry weight in surface sediment, and 126 to 226.1 ng/g dry weight in oyster tissue. In comparing PAH concentrations among the three matrices in Bushehr province, data showed that the pattern of individual PAHs in seawater, oyster, and sediment were different. The oysters tended to accumulate the lower molecular weight and the more water-soluble PAHs. Sediment samples were distinguished from the sea water and oyster samples by the presence of high molecular weight PAHs, especially six-ring PAHs. Three- and four-ring PAHs were the most abundant compounds among the 14 PAHs investigated in surface seawater, sediment, and oyster samples. As expected, differences in octanol/water partition coefficient among individual PAHs and the greater persistence of the higher molecular weight PAHs contributed to the accumulation patterns in oyster and sediment. The results of the study suggested that the main sources of PAHs in the seawater and sediment in the region were mixed pyrolitic and petrogenic inputs.     

Pollen morphology and trichome types of Betula spp. in the Hyrcanian forests of northern Iran

Pollen and trichome morphology of the genus Betula were evaluated from three main habitats in Iran using light and electron microscopy.Pollen types were identical and tri-porate;however,in terms of quantitative data,some differences were observed in exine(outside)wall thickness,length of polar axis and length of equatorial axis,possibly due to the environment.Pollen alone is insufficient to separate species of Iranian birch.Investigation of the trichome trait(small hairs or other outgrowths)revealed that birch species in Iran belong to:(1)Betula litwinowii Doluch.according to the low density of trichomes on the adaxial surface of the leaves and the lack of trichomes on the abaxial surface and many trichomes on the petioles;(2)Betula pendula Roth.due to the absence of trichomes on the adaxial surface and the low density of trichomes on the abaxial surface;and,(3)in the adaxial and abaxial surfaces of leaves and petioles,the trichomes had different types of pilose(long,soft hairs),and this strengthens the possibility of a different species or more likely a hybrid of B.pendula.     

Evaluation of Assouline–Or Adjusted Model to Express Soil Drainage Curve

Eurasian Soil Science - The objectives of this research are prediction of soil drainage curve using Assouline and Or (2014) adjusted soil drainage model and comparison of the predicted results with...     

Effects of Different Dietary Lipid Sources on Growth Performance,Salinity Tolerance,Haematological and Biochemical Parameters of Caspian Roach (Rutilus rutilus caspicus) Juvenile

This study investigates the effects of replacing fish oil with two vegetable oils (Sunflower oil and Soybean oil) on growth performance, salinity tolerance, hematological and serum biochemical profile of Rutilus rutilus over 56 days. Five diets were supplemented with 8% of either fish oil (FO) (control), sunflower oil (SFO), and soybean oil (SO) or a combination of 4% FO with 4% SFO and 4% FO with 4% SO, respectively. Triplicate groups of fish (24 fish per tank with an average body weight, of 5.52 g) were assigned to each diet. Blood samples were taken from the caudal vein of 75 apparently healthy fish at the end of trial. Hematological values of the blood samples were determined using standard techniques. At the end of the experiment fish were exposed to salinity stress. The results showed that the best growth performance was in fish fed the control diet, but the differences were minor among treatments containing vegetable oils (P > 0.05). Serum cholesterol and glucose concentrations were significantly higher in fish fed dieta containing vegetable oils (P < 0.05). Red blood cell count (RBC), hematocrit (Ht) and hemoglobin (Hb) in groups fed diets containing SFO and SO were higher than other groups (P < 0.05). There was no significant difference in survival after 48 h salinity stress (P > 0.05). These results indicate that in cases where fish oil is scarce or expensive, vegetable lipids can be used as replacements without any serious negative growth performance and health impacts.