Variation in the wheat AP2 homoeologs,the genes underlying lodicule development

The bread wheat genome harbors three homoeologs of the barley gene HvAP2, which determines the cleistogamous/non-cleistogamous flowering. The three homoeologs, TaAP2-A, TaAP2-B and TaAP2-D, are derived from the A, B and D genomes. The importance of lodicule swelling in assuring non-cleistogamous flowering in a range of wild and domesticated wheat accessions of varying ploidy level was established. Re-sequencing of wheat AP2 homoeologous genes was carried out to identify natural variation at both the nucleotide and polypeptide level. The sequences of wheat AP2 homoeologs are highly conserved even across different ploidy levels and no functional variants at the key miR172 targeting site were detected. These results indicate that engineering of cleistogamous wheat will require the presence of a functional TaAP2 modification at each of the three homoeologs.     

Effects of PLGA nanofibrous scaffolds structure on nerve cell directional proliferation and morphology

Electrospinning has been recognized as an efficient technique for the fabrication of neural tissue engineering scaffolds. Many approaches have been developed on material optimization, electrospinning techniques, and physical properties of scaffolds to produce a suitable scaffold for tissue engineering aspects. In this study, structural properties of scaffolds were promoted by controlling the speed of fiber collection without any post-processing. PLGA scaffolds, in two significantly different solution concentrations, were fabricated by the electrospinning process to produce scaffolds with the optimum nerve cell growth in a desired direction. The minimum, intermediate and maximum rate of fiber collection (0.4, 2.4, 4.8 m/s) formed Random, Aligned and Drown-aligned fibers, with various porosities and hydrophilicities. The scaffolds were characterized by fiber diameter, porosity, water contact angle and morphology. Human nerve cells were cultured on fiber substrates for seven days to study the effects of different scaffold structures on cell morphology and proliferation, simultaneously. The results of MTT assay, the morphology of cells and scaffold characterization recommend that the best structure to promote cell direction, morphology and proliferation is accessible in an optimized hydrophilicity and porosity of scaffolds, which was obtained at the collector linear speed of 2.4 m/s.     

Matrix-fibril morphology development of polypropylene/poly(butylenes terephthalate) blend fibers at different zones of melt spinning process and its relation to mechanical properties

Different shapes of dispersed phase such as sphere, laminar and fibrillar can form in the matrix phase of polymer blends. Production of blend fibers in melt spinning process can result more effective in fibrillar phase morphology formation than in other processes. In this research, the matrix-fibril morphology development during the melt spinning of polypropylene/poly(butylenes terephthalate) was studied. The shapes of blend dispersed phase collected from different zones of the melt spinning line were evaluated by scanning electron micrographs (SEM) and rheological mechanical spectra (RMS). The results showed that fibrillar shape could not be created in the PP/PBT blend fiber samples exited from the spinneret orifice (gravity spun fibers) at low contents (5 percent) of the PBT dispersed phase. However, a complete fibrillar structure was formed in all the as-spun PP/PBT blend fiber samples (melt drawn). The rheological evaluations confirmed a network structure resulting from fibril formation for the samples with high contents (20–40 %) of the PBT dispersed phase and the formation of spherical shape with low contents (5–10 %) of the PBT dispersed phase in matrix of the blend fibers. It was observed that the flow fields of processing zones and blend ratio, in producing the blend fibers, have intensive effects on morphological variations; besides there was a strong relation between the mechanical and morphological properties.     

Diversity of Secondary Metabolites from Marine Bacillus Species: Chemistry and Biological Activity

Marine Bacillus species produce versatile secondary metabolites including lipopeptides, polypeptides, macrolactones, fatty acids, polyketides, and isocoumarins. These structurally diverse compounds exhibit a wide range of biological activities, such as antimicrobial, anticancer, and antialgal activities. Some marine Bacillus strains can detoxify heavy metals through reduction processes and have the ability to produce carotenoids. The present article reviews the chemistry and biological activities of secondary metabolites from marine isolates. Side by side, the potential for application of these novel natural products from marine Bacillus strains as drugs, pesticides, carotenoids, and tools for the bioremediation of heavy metal toxicity are also discussed.     

Growth characteristics, stress-wave velocity, and Pilodyn penetration of 15 clones of 12-year-old Tectona grandis trees planted at two different sites in Indonesia

Tree improvement programs for teak (Tectona grandis) have mainly focused on breeding of trees with superior growth characteristics. However, improvement in wood quality should be included in breeding programs for high yield and high quality timber. In the present study, growth characteristics [stem diameter (D), tree height (H), and bole volume (V)], stress-wave velocity (SWV), and Pilodyn penetration (Py) were measured for 15 clones of 12-year-old teak trees planted at two different sites in Indonesia to clarify the variations in tree growth characteristics, SWV, and Py among clones, their repeatability, interaction between genotype and environment, and correlations between measured characteristics. Significant differences of all measured characteristics were found among 15 clones at both sites. Their repeatability showed relatively moderate to high values in both sites. These results indicate that these characteristics are closely related to genetic factors. Significant interaction between genotype and environment was found in all measured characteristics. In addition, SWV and Py showed lower interaction between genotype and environment than growth characteristics. No significant correlation was found between growth characteristics and SWV. These results suggest that wood properties and growth characteristics of teak trees can be improved by application of an appropriate tree breeding program.     

The competitiveness of the phytosociological attributes of the protected areas in Bangladesh with that in the other tropical countries

ABSTRACT

Many forest reserves in Bangladesh have been converted to protected areas (PAs) to conserve the forests resources from further depletion. This study has investigated if such initiatives have improved the state of biodiversity of these PAs amid tremendous anthropogenic pressure on forest resources. We have assessed the phytosociological attributes of the PAs in the country through a case study at Kaptai National Park (KNP) and compared the attributes with those of the adjacent areas and of the tropical forests across the world. We have identified 52 species belonging to 45 genera and 28 families. The most dominant species in KNP was Dipterocarpus spp. and the adjacent area was dominated by Tectona grandis. Unexpectedly, the Shannon-Wiener index of KNP has dropped down from 2.98 in 2000 to 0.90 in 2014. However, in terms of relative density, relative dominance, and relative frequency, KNP was better than the adjacent areas. In contrast, the mean Shannon-Wiener index in KNP (0.90) was smaller than that in the tropical countries (2.99). We recommend strengthening effective comanagement of PAs and enabling nonforestry income generation activities for the forest-dependent people so that the biodiversity of the PAs can be enriched while people’s livelihoods are ensured.     

Water relations and microbial proliferation in vase solutions of Narcissus tazetta L. cv. ‘Shahla-e-Shiraz’ as affected by biocide compounds

Summary

Disruption of cut flower water relations due to the growth and proliferation of microorganisms in the vase solution is one of the most important factors causing reduced vase-life and deterioration in cut flowers. These experiments were conducted to study the effects of some biocides in controlling microbial proliferation in vase solutions and on water relations in cut Narcissus tazetta L. cv. ‘Shahla-e-Shiraz’, a native bulbous cut flower of Iran. The stems of ‘Shahla-e-Shiraz’ Narcissus cut flowers were exposed to 17 treatments: aluminium sulphate (at 100, 200 or 300 mg l^–1), citric acid (at 150, 300 or 450 mg l^–1), 8-hydroxyquinoline citrate (at 200, 300 or 400 mg l^–1), sodium hypochlorite (at 400, 600 or 800 mg l^–1), calcium hypochlorite (at 400, 600 or 800 mg l^–1), sterilised distilled water, or tap water (control). Generally, the least effective compounds in controlling microbial proliferation were low concentrations of aluminium sulphate or citric acid. 8-Hydroxyquinoline citrate treatments were most effective, and the vase solution did not contain any microbes until day-6. Vase solution contaminants were yeasts, Bacillus ssp., Staphylococcus ssp., Actinomycetes and Aspergillus ssp. Yeasts and bacilli were the most common microorganisms. Severe symptoms of phytotoxicity such as bud abortion and yellowing in aluminium sulphate-treated flowers, stem proximal-end browning and shrinking in 8-hydroxyquinoline citrate-treated flowers, and bleaching of soaked parts in sodium hypochlorite treatments, were seen. Most solution was taken up in 150 mg l^–1 citric acid, while the reduction in fresh weight was least in 200 mg l^–1 8-hydroxyquinoline citrate. The correlation between microbial counts and growth rate with solution uptake was slightly negative, but their correlation with fresh weight loss was slightly positive.     

High Sodium in Irrigation Water Caused B Toxicity at Low Soil Solution and Shoot B Concentration in Maize (Zea mays L.)

Sodium (Na) and calcium (Ca) in brackish water differentially affects boron (B) nutrition of plants grown on calcareous and salt-affected soils. A glasshouse experiment was conducted to evaluate the effect of brackish irrigation water with different sodium adsorption ratio (SAR_iw) [distilled-water control, 8, and 16 (mmol_c L^?1)^1/2] on B nutrition of maize. Plants were grown for 40 days with 5 levels of B (0, 1.29, 2.30, 3.22, and 4.46 mg kg^?1 soil). Boron application significantly improved plant growth at lower rates. High B rates and application of high SAR_iw decreased plant growth independently, and the reduction in growth was further aggravated due to combined effect of both B and high SAR_iw. Decreased growth was attributed mainly to increased shoot B and Na concentration, while decreased Ca concentration. These ionic changes also altered internal and external B requirements. Yield decrease was observed at lower B concentration in soil solution B and plants shoot grown with high SAR_iw than in plants grown with distilled water and low B application rates.     

Effects of Some Organic Nitrogen Sources and Antibiotics on Callus Growth of Indica Rice Cultivars

A factorial experiment based on a completely randomized design with three replicates was conducted to evaluate effects of sixteen different mixtures of organic nitrogen sources and antibiotics which were supplemented to an Murashige and Skoog (MS) medium containing 4 mg L^?1 2,4-Dichlorophenoxyacetic acid (2,4-D), 0.4 mg L^?1 benzyl-aminopurine (BAP), 30 g L^?1 sucrose, 8 g L^?1 Agar-agar on fresh weight and dry weight (assessed after three days of drying at 70°C) of calli and in vitro callogenesis from scutellum of four indigenous Iranian Indica rice (Oryza sativa L.) cultivars, including ‘Hashemi’, ‘Gerdeh’, ‘Hasani’, and ‘Gharib’. It was found that proline at 2.8 g L^?1 is the most effective source of organic nitrogen in enhancing growth, whereas asparagine at 0.75 g L^?1 inhibited the calli growth. Hygromycin at 50 mg L^?1, with slight differences between the cultivars, could effectively stunt the growth of untransformed calli. Mixture of cefotaxime (250 mg L^?1) and vancomycin (250 mg L^?1) did not have any significant effects on calli growth, although this treatment was slightly phytotoxic.     

海栖热袍菌极端耐热木聚糖酶B的提纯

克隆并在大肠杆菌中表达的海栖热袍菌的 xyn B基因 ,其表达产物木聚糖酶 B的 C 末端带有 6×His标签 ,研究了这种基因重组酶的提纯方法。通过对粗酶提取液的热变性处理 ,Ni NTA亲和柱层析和离子柱层析 ,最终得到了电泳纯的木聚糖酶 B,提纯倍数 4 4.4 ,得率 11。SDS PAGE法测定木聚糖酶 B的相对分子质量为 4 2 ku,与理论推算值 4 2 333u相吻合