Historical processes and landscape context influence genetic structure in peripheral populations of the collared lizard (<Emphasis Type="Italic">Crotaphytus collaris</Emphasis>)

Populations at the periphery of a species’ range often show reduced genetic variability within populations and increased genetic divergence among populations compared to those at the core, but the mechanisms that give rise to this core-periphery pattern in genetic structure can be multifaceted. Peripheral population characteristics may be a product of historical processes, such as founder effects or population expansion, or due to the contemporary influence of landscape context on gene flow. We sampled collared lizards (Crotaphytus collaris) at four locations within the northern Flint Hills of Kansas, which is at the northern periphery of their range, to determine the genetic variability and extent of genetic divergence among populations for ten microsatellite loci (n = 229). We found low genetic variability (average allelic richness = 3.37 ± 0.23 SE; average heterozygosity = 0.54 ± 0.05 SE) and moderate population divergence (average F_ST = 0.08 ± 0.01 SE) among our sample sites relative to estimates reported in the literature at the core of the species’ range in Texas. We also identified differences in dispersal rates among sampling locations. Gene flow within the Flint Hills was thus greater than for other peripheral populations of collared lizards, such as the Missouri glade system where most of the mesic grasslands have been converted to forest since the last glacial retreat, which appears to have greatly impeded gene flow among populations. Our findings signify the importance of considering landscape context when evaluating core-peripheral trends in genetic diversity and population structure.     

Edge effect and matrix influence on the nest survival of an old forest specialist,the Brown Creeper (<Emphasis Type="Italic">Certhia americana</Emphasis>)

Conservation strategies should be based on a solid understanding of processes underlying species response to landscape change. In forests fragmented by agriculture, elevated nest predation rates have been reported in many forest bird species, especially near edges. In intensively-managed forest landscapes, timber harvesting might also be associated with negative edge effects or broader “context” effects on some species when the matrix provides additional resources to their major nest predators. In this study, we hypothesized that proximity to a forest edge and proportion of cone-producing plantations will increase nest predation risk in fragments of relatively undisturbed forest. We focused on the Brown Creeper (Certhia americana), an indicator species of late-seral forests. We compared habitat configuration and composition at four spatial scales (0.14, 0.5, 1 and 2 km) around 54 nests and related daily nest survival rate to the distance to the nearest forest edge, mean patch size of late-seral forest (r = 141 m), proportion of non-forested lands (r = 141 m), density of maintained roads (r = 1 km), proportion of cone-producing spruce plantations (r = 2 km), and year. The best model included distance to the nearest edge and proportion of cone-producing plantations. Distance of nests to the nearest edge was the best individual predictor of daily nest survival. A larger sample of nests showed a significant threshold in distance to the nearest forest edge; nests located at least 100 m away were more likely to fledge young. These results suggest that even in managed forest landscapes, matrix effects can be important and some bird species may exhibit negative edge effects.     

Reconstructing the collapse of wetland networks in the Swiss lowlands 1850–2000

In Central Europe vast wetland areas have been converted into agricultural land over the past few centuries. Long-term spatially explicit reconstructions of wetland cover changes at regional scale are rare but such information is vital for setting appropriate wetland conservation and restoration goals. In this study wetland cover change over the past 150 years was analyzed for the Canton Zurich (Switzerland) using information from historical and current topographical maps. Mapping instructions changed significantly over time, i.e., wetlands were mapped more conservatively on older maps. Therefore a technique was developed to account for changes in mapping instructions and to reconstruct a series of comparable maps spanning 1850–2000. Wetland cover dramatically decreased from 13,759 ha in 1850 (more than 8% of the total study area) to 1,233 ha in 2000 (less than 1%). Largest loss is observed for the first half of the twentieth century when more than 50% of the total wetland loss occurred. In 1850, almost all wetland patches were connected in two large networks defined by a 500 m buffer around all wetland patches to account for typical dispersal distances of wetland animals. Despite extensive wetland loss, this networks remained largely intact until 1950, but then collapsed into many medium and small networks consisting of only few wetland patches. In addition to the direct loss of wetland habitats increased habitat fragmentation is limiting metapopulation dynamics and hindering genetic exchange between populations. Amphibians and other wetland animals are particularly prone to habitat fragmentation because of their limited migration abilities. This may lead to time-delayed extinction in the future because current species occurrence might rather reflect historical than current wetland cover and habitat configuration. Future restoration efforts should focus on reestablishing connectivity between remaining smaller wetland networks.     

The paradox of keystone species persecuted as pests: A call for the conservation of abundant small mammals in their native range

Small mammals, such as European rabbits (Oryctolagus cuniculus), plateau pikas (Ochotona curzoniae) and prairie dogs (Cynomys spp.), traditionally have been perceived as pests and targeted for control within their native ranges, where they perform essential ecosystem roles and are considered keystone species. These species can reach high densities, and have been subjected to eradication campaigns because of their putative negative impact on natural habitats and agriculture and their competition with livestock for forage. Eradication programmes have been a main factor causing sharp declines of these species in their natural ranges. Paradoxically, they are keystone species where they are abundant enough to be perceived as pests. The term “pest” is usually a social perception that is rarely supported by scientific data, whereas there is considerable scientific evidence of the key ecological roles played by these species. We call for the conservation of these species and present a conceptual model regarding the management of their populations. Where they occur at high numbers, and hence their effects on biodiversity are still of crucial importance, the persecution of these species should be avoided and their natural habitats preserved. In areas with high conservation value, but where these species occur at low densities, management efforts should aim to increase their density. In areas of high commercial value, managers ideally should consider changing prioritization of the area to high conservation value by purchasing the land or obtaining conservation easements. In situations with high commercial value and demonstrable low conservation concern, small mammals could be reduced humanely.     

Intense degradation of myosin light chain isoforms in Spanish dry-cured ham

One of the main biochemical changes that take place during the processing of dry-cured ham is the degradation of the muscle protein fraction, mainly due to the action of muscle enzymes. In the present study, the isolation and tentative identification of 137 fragments from myosin light chain 1 (MLC 1), together with 88 fragments originated from myosin light chain 2 (MLC 2), have been achieved for the first time in Spanish dry-cured ham, proving the intense proteolysis experienced by myofibrillar proteins after dry-cured processing. This study was carried out by use of proteomic technology for peptide identification, and the possible enzymes contributing to the degradation of these proteins were also further discussed.     

Adapting the IUCN Red List criteria for invertebrates

The IUCN Red List is the most useful list of species that are at risk for extinction worldwide, as it relies on a number of objective criteria. Nevertheless, there is a taxonomic bias that excludes species with small body sizes, narrow distribution ranges and low dispersal abilities, which constitute the vast majority of the planet’s biota, particularly local endemics.By evaluating each IUCN criterion separately, we (i) identify the shortcomings for invertebrate applications, (ii) explain how risk categories may be wrongly applied due to inapplicable and/or misleading thresholds, (iii) suggest alternative ways of applying the existing criteria in a more realistic way and (iv) suggest possible new criteria that were not considered in the current evaluation framework but that could allow a more comprehensive and effective assessment of invertebrates.By adapting the criteria to rely more explicitly on the Area of Occupancy and the Extent of Occurrence, their respective trends and by using ecological modelling methods, the criteria’s applicability would be increased. The change in some thresholds or, eventually, the creation of sub-categories would further increase their adequacy. Additionally, co-extinction could be introduced as an explicit part of the classification process.As a case study, we evaluated 48 species of Azorean arthropods and Iberian spiders according to the current criteria. More than one-quarter (27%) of all evaluated species were classified as Critically Endangered, 19% as Endangered, 6% as Vulnerable and 8% as Least Concern. The remaining 40% did not have enough data to reach a classification.     

A non-linear model to predict crown recession of Norway spruce (<Emphasis Type="Italic">Picea abies</Emphasis> [L.] Karst.) in Austria

In this study, a non-linear model was developed that predicts the five-year change of height to crown base (HCB) of Norway spruce (Picea abies [L.] Karst.). Data were available from the Austrian National Forest Inventory and comprised 2,419 trees from 1,637 permanent sample plots measured during 1981 and 2002. The dynamic model explained 36% of the variation in the observed change of HCB. It is well behaved and meets biological expectations. Based on five independent data sets, the predictive ability of the new dynamic model was compared to an already existing static crown ratio model. For this comparison, the models were applied as follows: the new ∆ HCB model was used to predict the change in HCB directly. For the semi-dynamic method, the static model was applied at the end and at the start of the growth period to obtain two estimates of HCB. The difference of these two estimates was then added to the initial HCB. For the static method, the model was only applied at the end of the prediction period to obtain the new estimate of HCB. Except for one plot, the new ∆ HCB model yielded the smallest BIAS and the highest precision, followed by the semi-dynamic and the static method. Because the independent data sets cover a broad range of age classes and thinning regimes, the validation results also indicate that the new ∆ HCB is robust and the effect of stand management is adequately represented.     

Absence of geographical structure of morphological variation in <Emphasis Type="Italic">Juniperus oxycedrus</Emphasis> L. subsp. <Emphasis Type="Italic">oxycedrus</Emphasis> in the Balkan Peninsula

We examined leaf and mature seed cone variation of Juniperus oxycedrus L. subsp. oxycedrus in 12 natural populations across the species range in the Balkan Peninsula. We measured 10 morphological traits from a minimum of 100 leaves in each of 190 individuals, and two morphological traits from 30–50 seed cones in each of 94 females. High phenotypic variation was found, but no geographical structure or cline across populations was detected for any of the studied traits. Mean values of comparable leaf and cone morphological traits did not differ considerably from values reported elsewhere. Gender dimorphism in leaf morphology was detected, but it was not distributed uniformly throughout the studied area. An ANOVA model with both nested and crossed effects revealed that the largest proportion of the total variation was, as expected, contained within populations, partly as among-tree variation (18–47%, depending on the trait) and partly as within-tree variation (33–77%), which was remarkably high. Gender dimorphism explained only 0–3% of the total variation. Differences among populations (2–23%) were significant for all studied traits except one; however, PCA showed no clear geographical differentiation of the studied populations. This lack of phylogeographical structure may be the consequence of repeatedly occurring colonisation-retreat scenarios and suggests the existence of several small refugial populations scattered over a large part of the Balkan Peninsula in the Pleistocene. Further research including palaeobotanical and molecular genetic studies will be needed to better understand the forces that shaped current variation patterns of J. oxycedrus L. subsp. oxycedrus in the Balkan Peninsula.     

Stem modeling and simulation of conversion of cork oak stems for quality wood products

Recent research is underway to study cork oak (Quercus suber L.) wood potential for production of wood components. A total of 35 stems of young and mature cork oaks were sampled, live sawn into flitches, scanned using VTT’s WoodCIM^®, and the measured data computed by VTT’s PuuPilot software, allowing stem 3D reconstruction. Sawing simulations were run for 0.5 m and 1 m logs and the whole stem. Sawn products were (1) planks, (2) parquet, (3) lamparquet, and (4) external component of multilayer planks. Cork oak stems showed a moderate to small taper (mean 24 mm/m). Curviness varied between straight to significantly crooked stems (mean value 40 mm) Batch yields for the tested products ranged 25–43% and 37–50% for 0.5 m logs of young and mature trees, respectively; for 1 m logs, batch yields ranged 19–41% and 25–54%. When using the whole stem, batch yields were lower, ranging 11–38% and 15–50%. Higher yields were obtained for all log lengths and samples for production of lamparquet, parquet, and multilayer component.     

Post-fire attractiveness of maritime pines (<Emphasis Type="Italic">Pinus pinaster</Emphasis> Ait.) to xylophagous insects

The spectrum and dynamics of xylophagous insects infesting Pinus pinaster after a fire event were studied from November 2007 to December 2008 at Sierra de Outes (Galicia, NW Spain). Insects were collected within and outside the fire area. Relationships among species status, species abundance, tree parameters and tree injury were assessed. Mortality of injured trees was also recorded. Insect colonization built up consistently during the first year after the fire, although the pests did not colonize unburned trees in nearby areas. Thirteen insect species from six xylophagous families were collected. Tomicus spp., Buprestis novenmaculata, Anobium punctatum and Pissodes castaneus were the first species detected. Tomicus spp. (29%) and Ips sexdentatus (23%) were the dominant taxa. Bole char height and soil burn severity were positively correlated with insect presence. Trees with short stem diameter and thinner bark were also preferred. B. novenmaculata presence was positively correlated with crown scorch. Loss of cambium hydration was negatively related to the occurrence of pests, likely because sapwood desiccation and loss of nutrient impede brood development. About 33.3% of the fire-scorched pines died. The results recommend the removal of injured and dying pines after fire, to avoid the rise of pest population threatening recovering trees in the burned areas.