Incorporating parameter uncertainty into prediction intervals for spatial data modeled via a parametric variogram

In spatial predictions, researchers usually treat the estimated theoretical variogram parameters as known without error and ignore the variability of the parameter estimators. Although the prediction is still unbiased, the prediction error is usually underestimated. Therefore, the coverage probability of the prediction interval usually is lower than the nominal probability. A simulation study is performed to show how the coverage probability for prediction relates to the true range and sill of an exponential variogram. This article proposes two parametric bootstrap methods to incorporate the variability of the corresponding parameter estimators. A simulation study is performed to evaluate the coverage probability of these proposed methods. Finally, we apply the parametric bootstrap methods to a real dataset and compare the results with those from naive (i.e., treating estimated parameters as known) and Bayesian methods.     

A method for linking in situ activities of hydrolytic enzymes to associated organisms in forest soils

A root window-based, enzyme-imprinted, membrane system has been modified to enable visualization of the activities of hydrolytic enzymes (acid phosphatase, aminopeptidase, chitinase, and β-glucosidase) in situ in forest soils. The approach can be used to correlate the distribution of enzyme activity with visible features such as roots, mycorrhizas, or mycelial mats. In addition, it enables accurate spatial soil sampling for analysis of microbial communities associated with enzyme activities. The substrates are colorimetric conjugates of napthol, where color develops instantly in the field, or fluorimetric conjugates of 4-methylumbelliferone, whose fluorescent products are detected by a gel-documenting system. The method will allow important questions about the relationship between taxonomic and functional diversity of soil microorganisms to be addressed and identification of enzyme activity hot-spots in soil.     

Genetic Analysis of Black Spruce (Picea mariana) Populations from Dry and Wet Areas of a Metal-Contaminated Region in Ontario (Canada)

Genetic variation and genetic structure of black spruce (Picea mariana L.) populations growing in wet land (lowlands) and dry lands (uplands) with different levels of metal contaminations were analyzed using ISSR. Polymorphic loci (P%) ranged from 65% to 90% with a mean of 75%. Nei??s gene diversity (h) varied from 0.264 to 0.359 with a mean of 0.310, and Shannon??s index (I) ranged from 0.381 to 0.524 with a mean of 0.449. The level of genetic variation was higher in populations from wet lands than those from dry lands. Variation within populations accounts for most of total genetic variation. The genetic distance among the black spruce (P. mariana) populations ranged from 0.171 to 0.351. The present study indicates that genetic variation and long-term exposure to metals (more than 30 years) are not associated. Cytological analysis of black spruce seeds from metal-contaminated and -uncontaminated areas showed normal mitotic behavior during prophase, metaphase, anaphase, and telophase.     

Towards a Pan‐European Assessment of Land Susceptibility to Wind Erosion

Understanding spatial and temporal patterns in land susceptibility to wind erosion is essential to design effective management strategies to control land degradation. The knowledge about the land surface susceptible to wind erosion in European contexts shows significant gaps. The lack of researches, particularly at the landscape to regional scales, prevents national and European institutions from taking actions aimed at an effective mitigating of land degradation. This study provides a preliminary pan‐European assessment that delineates the spatial patterns of land susceptibility to wind erosion and lays the groundwork for future modelling activities. An Index of Land Susceptibility to Wind Erosion (ILSWE) was created by combining spatiotemporal variations of the most influential wind erosion factors (i.e. climatic erosivity, soil erodibility, vegetation cover and landscape roughness). The sensitivity of each input factor was ranked according to fuzzy logic techniques. State‐of‐the‐art findings within the literature on soil erodibility and land susceptibility were used to evaluate the outcomes of the proposed modelling activity. Results show that the approach is suitable for integrating wind erosion information and environmental factors. Within the 34 European countries under investigation, moderate and high levels of land susceptibility to wind erosion were predicted, ranging from 25·8 to 13·0 M ha, respectively (corresponding to 5·3 and 2·9% of total area). New insights into the geography of wind erosion susceptibility in Europe were obtained and provide a solid basis for further investigations into the spatial variability and susceptibility of land to wind erosion across Europe. © 2014 The Authors. Land Degradation and Development published by John Wiley & Sons, Ltd.     

Leaching of carbon and nitrogen from a sandy soil substrate: A comparison between suction plates and ion exchange resins

To determine boundary effects on leaching, we investigated (1) how filter materials affect the concentrations of dissolved organic carbon (DOC) and nitrate (NO₃‐N) in soil percolates and (2) whether ion exchange resins and suction plates are equally suited to capture NO₃‐N. DOC leaching was higher with PE suction plates and plate material did not affect NO₃‐N leachate concentrations. Cumulative NO₃‐N leaching was similar for glass suction plates and ion exchange resins.     

Mobile and readily available C and N fractions and their relationship to microbial biomass and selected enzyme activities in a sandy soil under different management systems

Within different land‐use systems such as agriculture, forestry, and fallow, the different morphology and physiology of the plants, together with their specific management, lead to a system‐typical set of ecological conditions in the soil. The response of total, mobile, and easily available C and N fractions, microbial biomass, and enzyme activities involved in C and N cycling to different soil management was investigated in a sandy soil at a field study at Riesa, Northeastern Germany. The management systems included agricultural management (AM), succession fallow (SF), and forest management (FM). Samples of the mineral soil (0—5, 5—10, and 10—30 cm) were taken in spring 1999 and analyzed for their contents on organic C, total N, NH₄⁺‐N and NO₃^—‐N, KCl‐extractable organic C and N fractions (Corg_(KCl) and Norg_(KCl)), microbial biomass C and N, and activities of β‐glucosidase and L‐asparaginase. With the exception of Norg_(KCl), all investigated C and N pools showed a clear relationship to the land‐use system that was most pronounced in the 0—5 cm profile increment. SF resulted in greater contents of readily available C (Corg_(KCl)), NH₄⁺‐N, microbial biomass C and N, and enzyme activities in the uppermost 5 cm of the soil compared to all other systems studied. These differences were significant at P ≤ 0.05 to P ≤ 0.001. Comparably high C_mic:C_org ratios of 2.4 to 3.9 % in the SF plot imply a faster C and N turnover than in AM and FM plots. Forest management led to 1.5‐ to 2‐fold larger organic C contents compared to SF and AM plots, respectively. High organic C contents were coupled with low microbial biomass C (78 μg g^—1) and N contents (10.7 μg g^—1), extremely low C_mic : C_org ratios (0.2—0.6 %) and low β‐glucosidase (81 μg PN g^—1 h^—1) and L‐asparaginase (7.3 μg NH₄‐N g^—1 2 h^—1) activities. These results indicate a severe inhibition of mineralization processes in soils under locust stands. Under agricultural management, chemical and biological parameters expressed medium values with exception for NO₃^—‐N contents which were significantly higher than in SF and FM plots (P ≤ 0.005) and increased with increasing soil depth. Nevertheless, the depth gradient found for all studied parameters was most pronounced in soils under SF. Microbial biomass C and N were correlated to β‐glucosidase and L‐asparaginase activity (r ≥ 0.63; P ≤ 0.001). Furthermore, microbial biomass and enzyme activities were related to the amounts of readily mineralizable organic C (i.e. Corg_(KCl)) with r ≥ 0.41 (P ≤ 0.01), suggesting that (1) KCl‐extractable organic C compounds from field‐fresh prepared soils represent an important C source for soil microbial populations, and (2) that microbial biomass is an important source for enzymes in soil. The Norg_(KCl) pool is not necessarily related to the size of microbial biomass C and N and enzyme activities in soil.<?show $6#>     

Alternative modes of governance: organic as civic engagement

A major strategy in the creation of sustainable economies is the establishment of alternative market institutions, such as fair trade and local market systems. However, the dynamics of these alternative markets are poorly understood. What are the rules of behavior by which these markets function? How do these markets maintain their separate identity as “alternative”: apart from the conventional (“free”) market system? Building on Lyson’s notion of civic agriculture, we argue that alternative markets maintain themselves through civic engagement. However, we argue that the civically-engaged practices of alternative markets are poorly understood. We seek, therefore, to begin a conversation about the everyday forms of civic engagement in alternative practice and to do this we introduce a few useful conceptual tools. Building upon ideas in science studies about the collaboration of scientists (Hess, Alternative pathways in science and industry, 2007) we argue that civic markets have their own “market fields” and “modes of governance” (Bulkeley et al., Environment and Planning A 39:2733–2753, 2007), their own fields of social interaction in which rules of behavior become stabilized and determine how the market works. The creation of a social field also requires the demarcation of boundaries, referred to in the science studies literature as “boundary work” (Gieryn, Cultural boundaries of science: Credibility on the line, 1999). We apply the idea of boundary work to understand how alternative market actors maintain boundaries between alternative and conventional markets. Finally, studies of collaboration in science have often centered on the object created through these interactions, an object that is partially material and partially a product of knowledge, what (Rheinberger, Toward a history of epistemic things: Synthesizing proteins in the test tube, 1997) calls an “epistemic object.” We use this idea to understand that the creation of alternative objects of exchange, such as organic food, are epistemic objects in that they combine both particular materialities and particular ways of knowing. Using these concepts, we will carry out a close analysis of the mode of governance in the national organic market, looking specifically a recent governance crisis in organic agriculture known as the Harvey lawsuit.     

Source relationships between streambank soils and streambed sediments in a mercury-contaminated stream

Purpose

In contaminated streams, understanding the role of streambank and streambed source contributions is essential to developing robust remedial solutions. However, identifying relationships can be difficult because of the lack of identifying signatures in source and receptor pools. East Fork Poplar Creek (EFPC) in Oak Ridge, TN, USA received historical industrial releases of mercury that contaminated streambank soils and sediments. Here, we determined relationships between the contaminated streambank soils and sand-sized streambed sediments.

Materials and methods

Field surveys revealed the spatial trends of the concentrations of inorganic total mercury (Hg) and methyl mercury (MeHg), Hg lability as inferred by sequential extraction, particle size distribution, and total organic carbon. Statistical tests were applied to determine relationships between streambank soil and streambed sediment properties.

Results and discussion

Concentrations of Hg in streambank soils in the upper reaches averaged 206 mg kg^?1 (all as dry weight) (n?=?457), and 13 mg kg^?1 in lower reaches (n?=?321), while sand-sized streambed sediments were approximately 16 mg kg^?1 (n?=?57). Two areas of much higher Hg and MeHg concentrations in streambank soils were identified and related to localized higher Hg concentrations in the streambed sediments; however, most of the streambank soils have similar Hg concentrations to the streambed sediments. The molar ratio of Hg to organic carbon, correlation between MeHg and Hg, and particle size distributions suggested similarity between the streambank soils and the fine sand-sized fraction (125–250 μm) collected from the streambed sediments. Mercury in the fine sand-sized streambed sediments, however, was more labile than Hg in the streambank soils, suggesting an in-stream environment that altered the geochemistry of sediment-bound Hg.

Conclusions

This study revealed major source areas of Hg in streambank soils, identified possible depositional locations in streambed sediments, and highlighted potential differences in the stability of Hg bound to streambank soils and sediments. This work will guide future remedial decision making in EFPC and will aid other researchers in identifying source–sink linkages in contaminated fluvial systems.