Microbial biomass and nitrogen transformations in surface soils strongly acidified by volcanic hydrogen sulfide deposition in Osorezan, Japan

Volcanic acidification has created unique ecosystems that have had to adapt to the acidic environments in volcanic regions. To characterize the primary microbial properties of strongly acidified soils in such environments, we investigated microbial biomass, nitrogen transformations and other relevant chemical properties in the surface soils of solfatara and forests from Osorezan, a typical volcanic region in Japan, and compared the results to common Japanese forest soils. Soil microbial biomass C (MBC) and N (MBN) were determined using the chloroform fumigation–extraction method. Potential net N mineralization and net nitrification were measured in aerobic laboratory incubations. Long-term acidification in the Osorezan soils by volcanic hydrogen sulfide deposition caused low soil pH (3.0–3.8), base cation deficiency and increased concentrations of toxic ions such as Al³⁺. The proportions of MBC to total carbon (MBC/TC ratio) and MBN to total nitrogen (MBN/TN ratio) were lower than those in common Japanese forest soils. The extreme acidic conditions may have inhibited microbial survival in the Osorezan acid soils. Net N mineralization occurred at rates comparable to those in common Cryptomeria japonica forest soils, probably because of the presence of acid-tolerant soil microorganisms. Net nitrification was completely inhibited and autotrophic ammonia oxidizers were not detected by the MPN method. The inhibition of nitrification prevents nitrogen leaching from the soils, thus maintaining a nitrogen cycle in the volcanic acid region in which     (and NH₃) is recycled among microorganisms and plants.     

The canine RAD51 mutation leads to the attenuation of interaction with PALB2

RAD51 forms a complex with BRCA2 and plays a central role in the DNA damage response pathway that is associated with homologous recombination. The structures of RAD51 and its homologues are highly conserved from prokaryotes to higher eukaryotes. Although a large number of BRCA2 mutations have been reported, there are only a few reports on the mutations of RAD51, which have been shown in humans and dogs. However, several mutations of canine RAD51 were identified from mammary gland tumour tissues in a recent study. Some of these mutations seem to have an influence on the homo‐oligomerization or interaction with “Partner and localizer of BRCA2” (PALB2). In this study, we cloned the canine PALB2 homologue and investigated the effect on its interaction with the RAD51 mutants to evaluate the alteration in the function of RAD51 mutants. The A209S and T225S mutants of RAD51 show an attenuation of the interaction between RAD51 and PALB2. These results indicate that the canine RAD51 mutations can potentially alter the homologous recombination pathways in response to DNA damage in dogs.     

Microorganisms in tile forest soils with different vegetation

Characteristic microfloras have been found to exist corresponding to the soil types. In cultivated soil, corynebacteria have been shown to be one of the dominant groups, and In grassland soil has been characterized by pseudomonads (1–3). In contrast, pine forest soil has been shown to contain Bacillus as a dominant genus (4).     

Significance of hydrous iron oxides in enhancing P sorption of soils with the addition of sodium hydrosulfite (Na2S2O4)

Phosphorus sorption (P_sor) of soils is affected by redox conditions. It has been shown that P_sor of lowland soils at a pH value of about 4.3 increases when a small amount of sodium hydrosulfite (Na₂S₂O₄) is added and decreases when an excess amount of (Na₂S₂O₄) is added to the mixture of a soil and P solution. Hydrous Fe-Al oxides, manganese dioxide (MnO₂) exchangeable Ca, models of reactive components with P in soils, were examined to identify the factors responsible for the increase of P_sor in lowland soils when a small amount of Na₂S₂O₄ was added. For clarifying the contribution of the hydrous Fe-Al oxides, goethite and 7 hydrous Fe-Al oxides (Fe/Al atomic ratio: 1/0, 5/1, 2/1, 1/1, 1/2, 1/5, and 0/1) were used. The P_sor of all these materials increased when they were treated with a small amount of Na₂S₂O₄ although the increase was the smallest for the hydrous Al oxide among the 7 oxides. Thus, the hydrous Fe oxides, and Al oxide to a smaller extent, play an important role in the increase in P_sor of the lowland soils treated with a small amount of Na₂S₂O₄ The P_sor of the hydrous Fe oxides was not appreciably affected by the addition of MnO₂. The increase in P_sor of the Ca-saturated Hachirogata soil was almost the same as that of the Nasaturated Hachirogata soil, indicating that exchangeable Ca did not affect appreciably the increase of P_sor in reduced soils at a pH value of about 4.3.     

Factors controlling accumulation and decomposition of organic carbon in humus horizons of Andosols

Andosols often accumulate soil organic matter (SOM) in large amounts. To investigate the factors controlling the stability and lability of organic carbon (OC) in humus horizons of Andosols, we selected 19 A horizon samples (surface and subsurface horizons) from the Field Station of Tohoku University including areas where benchmark soil profiles of non-allophanic Andosols are distributed. We determined the soil properties possibly controlling the OC accumulation, such as pH(H₂O), 1 M KCl-extractable aluminum (KCl-Al), pyrophosphate-extractable Al and iron (Al_p, Fe_p), acid oxalate-extractable silicon (Si_o), total OC, water-extractable OC, and humified OC. To evaluate the OC mineralization, we measured the soil respiration rates in a laboratory for non-treated, neutralized (CaCO₃, Ca(OH)₂ and NaOH), and nutrient applied (KH₂PO₄, (NH₄)₂SO₄) soil samples. Statistical analyses, including a path analysis, showed that the Al_p and pH(H₂O) values are directly related to the OC concentration (P?<?0.01 and P?<?0.05, respectively). There was a significant negative correlation (P?<?0.01) between the soil respiration rates of the non-treated samples and the ratios of the humified OC to total OC, showing that the humification of the SOM was definitely related to the OC stability. Effects of the chemical treatments to the soil respiration rates were greater in the surface horizon samples with an abundant labile OC than those in the subsurface samples. Neutralization affected the soil respiration rates more significantly than the nutrient application. Among the neutralization treatments, the liming materials more effectively increased the respiration rates. This was probably due to an increase in the lability of the humified OC by liming.     

Hematological and Biochemical Reference Values for the Endangered Kiso Horse

To establish blood and biochemical references for the endangered Kiso horse, blood samples were collected from 111 adult Kiso horses, 74.5% of the existing breed. The samples were analyzed for 23 hematological and biochemical parameters to determine their means and standard deviations (SD). We compared the mean ± 2SD with the reference values cited in one of the most commonly used veterinary textbooks in Japan. The hematology of Kiso horses is characterized by lower erythrocyte count and hematocrit and hemoglobin levels. In addition, their serum biochemistry showed lower levels of aspartate transaminase, alkaline phosphatase, and γ-glutamyl transferase. Whether these propensities are attributed to breed-specific factors or are acquired factors remains unclear. Nevertheless, this study provides useful diagnostic indices for the endangered Kiso horse.     

Induced Resistance to Rice Blast by Antagonistic Bacterium, <Emphasis Type="Italic">Serratia marcescens </Emphasis>Strain B2

An antagonistic bacterium, Serratia marcescens strain B2, controlled rice blast after being sprayed onto rice phylloplane, as did the bacterial suspension when poured into rhizosphere soil of rice plants. Three days after root treatment, rice blast conidia were sprayed onto rice foliage. A week after pathogen inoculation, rice blast was suppressed and lesions caused by the pathogen decreased in size. Brown deposits were observed around sites of pathogen infection after root treatment. Induced resistance was not associated with an increase in the activitiy of peroxidase, phenylalanine ammonia lyase, tyrosine ammonia lyase, β-1,3-glucanase, β-1,4-glycosidase, N-acetylhexosaminidase or chitinase. However, lipoxygenase levels were elevated after the root treatment with strain B2 following inoculation with the pathogen. Strain B2 was not detected in rice foliage after root treatment. These data suggest that strain B2 induced resistance against rice blast caused by Pyricularia oryzae. Received 1 November 2001/ Accepted in revised form 25 January 2002     

Fast-forward playback of recent memory sequences in prefrontal cortex during sleep

As previously shown in the hippocampus and other brain areas, patterns of firing-rate correlations between neurons in the rat medial prefrontal cortex during a repetitive sequence task were preserved during subsequent sleep, suggesting that waking patterns are reactivated. We found that, during sleep, reactivation of spatiotemporal patterns was coherent across the network and compressed in time by a factor of 6 to 7. Thus, when behavioral constraints are removed, the brain's intrinsic processing speed may be much faster than it is in real time. Given recent evidence implicating the medial prefrontal cortex in retrieval of long-term memories, the observed replay may play a role in the process of memory consolidation.     

Mating rhythms of Drosophila: rescue of tim01 mutants by D. ananassae timeless

Background  

It is reported that the circadian rhythms of female mating activity differ among Drosophila species and are controlled by an endogenous circadian clock. Here, we found that the mating rhythm of D. ananassae differed from that of D. melanogaster. Moreover, to evaluate the effect of clock gene products on mating activities, we examined the mating activity of D. melanogaster timeless (tim ⁰¹) transgenic fly harboring heat-shock promotor driven-D. ananassae timeless (tim) gene (hs-AT tim ⁰¹).