The source of autumn and spring downstream migrating juvenile Atlantic salmon in a small lowland river

Over 3 years, 32,444 age‐0 group Atlantic salmon (Salmo salar) parr tagged with passive integrated transponder tags throughout the River Frome catchment were assigned to one of three groups, nonmigrants, autumn migrants and spring smolts, depending on the detection and the timing of detection at downstream tag readers (situated 8.6 km above the tidal limit). We examined the effect of density at the time of tagging (n·m^?2), distance upstream from the tidal limit (km), fish length (mm), Fulton condition index, habitat type (divided into two types, main river and carrier), days after 1 September that each fish was tagged and year (replication) on the proportions of fish in each of the migration groups. Distance upstream from tidal limit was strongly negatively related to the proportion of autumn migrants and positively related to the proportion of spring smolts. Nonmigrants had a lower average body size than migrants, although there were no differences in the sizes of autumn migrants and spring smolts in September prior to migration. Fish density had no effect on migration strategy. A lower proportion of fish migrated as autumn migrants from the smaller carrier habitats than the main river channel. There is some evidence that those parr destined to become autumn migrants underwent a lower mortality rate during September before tagging than those destined to become spring migrants indicating possible physiological or behavioural differences between these two groups of fish at that time. More research into the factors responsible for initiating the autumn migration is required.     

Does streptobacillary arthritis reduce house mouse population density,activity and damage to sorghum crops?

An experiment to examine the effect of streptobacillary arthritis on mouse populations was conducted in maturing sorghum crops in mouse-proofed pens. There were three treatment pens and three control pens in which mice with and without clinical signs of streptobacillary arthritis were introduced, respectively. A constant mouse density (533 mice ha⁻¹) was introduced to the pens by releasing 12 mice in each pen. The sex ratio of introduced mice was also constant by releasing in each pen nine males and three females. Mean track index was lower in treatment pens than in control pens, indicating that streptobacillary arthritis reduced the activity of mice. However, this was not translated into a reduction in other population responses. Mean mouse density at harvest, percentage of female pregnant at harvest, yield loss caused by mice and a feeding index (oil card index) did not differ significantly between treatment and control groups. A plausible explanation for these findings was that mice with the clinical signs might be less active but were able to consume as much grains as mice without the clinical signs because food was in abundant supply.     

Congenital cataracts in an Ayrshire herd: a herd case report

Background

Microbiological standards within pork slaughter processing plants in the European Union are currently governed by Commission Regulation (EC) 2073/2005, which describes detailed performance criteria at specific stages of the procedure (following carcass dressing and before chilling) for total viable counts (TVC), Enterobacteriaceae (EB) and Salmonella spp. In this study, 95 carcasses from an Irish pork slaughter plant were sampled by swabbing 100 cm² of surface at three sites (belly, ham, jowl) to examine the effects of eight processing stages (stunning, bleeding, scalding, singeing, polishing, evisceration, final inspection and chilling) on contamination levels.

Results

TVC ranged from approximately 1.7–6.3 log cfu cm² during sampling. There were significant reductions in TVC for all sites after scalding and singeing (p < 0.05), whilst there was a significant increase in counts after polishing and evisceration (p < 0.05) compared with preceding stages. EB counts indicated hygienic weak points in the examined slaughter plant leading to faecal (cross)-contamination, with elevated counts after stunning, bleeding and evisceration (p < 0.05), compared with final counts after chilling.

Conclusions

Although the bacterial numbers reported in this study may reflect specific plant practices and temporal influences, results show that contamination can be introduced at various steps in the process and highlight the importance of monitoring locations other than those required by legislation within the process. Monitoring can be used to establish baseline levels for high-risk stages specific to each plant and to assess the effectiveness of additional interventions.     

On-farm evaluation of three different hatchery sources of Pacific white shrimp (Litopenaeus vannamei) cultured in on-levee tanks in low-salinity waters of west Alabama

ABSTRACT

Shrimp farmers in Alabama who produce the Pacific white shrimp, Litopenaeus vannamei, have recently reported abnormally low survival at harvest. Farmers have hypothesized that this phenomenon may be due to disease, toxic algae, shrimp source, or reduced shrimp robustness in later stages of production. To compare performance of shrimp from different sources, postlarvae were obtained from three different hatcheries and stocked on the same day in on-levee tank systems (TS) on two farms (Farm 1-TS; Farm 2-TS1; Farm 2-TS2). Following 104 days of culture on Farm 2-TS1 and Farm 2-TS2, there were no differences in survival (72.8%–91.2%) or final weight (19.8–24.6 g). At Farm 1-TS following 107 days of culture, there were differences in survival from shrimp sourced from one hatchery (40.5%) compared to the other two hatcheries (61.0%–69.8%). Results demonstrated acceptable growth performance and survival from all hatchery sources.     

Migration‐affected change and vulnerability in rural Vanuatu

Migration is increasingly being promoted as a possible adaptive response to risks associated with climate change and other stresses. While migration may present an adaptation pathway in certain contexts, existing research fails to consider the ways in which migration could contribute to vulnerability in sending communities. This paper examines the impact of migration‐affected change on local vulnerability in Lamen Bay, Vanuatu. Qualitative methods, including interviews and focus groups with 58 individuals, were used to determine how migration interacts with the multiple stressors faced by the community. The results show that migration is likely to contribute to vulnerability in already vulnerable communities. In Lamen Bay, migration affects a number of contextual factors that influence exposure and the capacity to respond to change, including labour supply, food security, migrant attitudes, underdevelopment and institutional viability. These results suggest that development policy in Vanuatu needs to address existing vulnerabilities while offering the opportunity to migrate.     

Segregation distortion in doubled haploid lines of barley (Hordeum vulgare L.) detected by simple sequence repeat (SSR) markers

A total of 147 simple sequence repeat (SSR) markers (including86 barley and 61 wheat microsatellite markers) were tested for their segregation in a doubled haploid (DH) and an F₂ population of barley. The DH population consisted of 71 doubled haploid lines, developed from F₁ plants of a cross between Tadmor and WI2291using isolated microspore culture technique. A genetic linkage map consisting of 43 microsatellite markers was constructed using the DH population. Particularly on chromosome 4H microsatellite markers showed distorted segregation ratios. Segregation of DH lines based on molecular markers were compared with segregation of 92 F₂ lines from the same cross. The proportion of loci deviating from the expected monogenic segregation ratios in the DH population was significantly higher (19/43loci, 44%) than in the F₂ population (7/43 loci, 16%). The deviation was biased towards the WI2291 parent alleles. In line with this observation, WI2291 was found to perform better than Tadmor in regenerating green plantlets with the isolated microspore-culture technique. This revised version was published online in July 2006 with corrections to the Cover Date.     

Fire intensity effects on seed germination of native and invasive Eastern deciduous forest understory plants

Low-intensity fires were important for maintaining the structure of Eastern deciduous forests (EDFs) for thousands of years before European settlement of North America, though fire suppression became a standard management practice in the 1930s. More recently, prescribed fires have been reintroduced to EDF habitats to aid in the restoration of native plant diversity, but invasions of non-native species such as Microstegium vimineum (Japanese stiltgrass) may increase prescribed fire intensity and suppress colonization of native species. As fire becomes a more common management tool in these habitats, it is vital to predict fire temperature effects on the native and non-native species present in the system. In this study, we found that prescribed fires in areas invaded by Microstegium can be 250-300 °C hotter than fires in nearby native-dominated areas. We then compared the effects of fire on germination rates of six native and three non-native EDF understory species representing the range of functional groups common in this habitat. We manipulated both fire intensity (temperature and length of exposure) and type of fire effect (direct flame and indirect furnace heat) to generate germination curves and make predictions about potential prescribed fire effects on populations of these species. There were very different responses among species to both direct (flame) and indirect (furnace) heating. Germination of three native species, Lycopus americana (American water horehound), Verbesina alternifolia (wingstem), and Vernonia gigantea (tall ironweed), showed signs of being stimulated by heating at low temperatures, while germination of all non-native species (M. vimineum, Elaeagnus umbellata, and Schedonorus phoenix) were inhibited at these lower intensities. High fire intensity (temperatures above 300 °C) effectively killed most species, though one native species, Senna hebacarpa (American senna) and one non-native species, E. umbellata (autumn olive), were capable of tolerating 500 °C temperatures. We conclude that high-intensity prescribed fires in habitats invaded by Microstegium may reduce seed germination of some non-native species, but may also inhibit the regeneration of native understory species.     

Recent advances in cleanup of fats by sweep co-distillation. Part 2. Organophosphorus residues

This paper describes the isolation of 5 organophosphorus residues in beef fat by a commercial sweep co-distillation unit (Unitrex). The operating conditions specified 223 degrees C and nitrogen flow at 230 mL/min. Recoveries of chlorpyriphos, monodechlorchlorpyriphos, bromophos-ethyl, debromobromophos-ethyl, and ethion ranged from 84 to 99%, with coefficients of variation between 3 and 5%.     

Thunderstorms: an important mechanism in the transport of air pollutants

Acid deposition and photochemical smog are urban air pollution problems, and they remain localized as long as the sulfur, nitrogen, and hydrocarbon pollutants are confined to the lower troposphere (below about 1-kilometer altitude) where they are short-lived. If, however, the contaminants are rapidly transported to the upper troposphere, then their atmospheric residence times grow and their range of influence expands dramatically. Although this vertical transport ameliorates some of the effects of acid rain by diluting atmospheric acids, it exacerbates global tropospheric ozone production by redistributing the necessary nitrogen catalysts. Results of recent computer simulations suggest that thunderstorms are one means of rapid vertical transport. To test this hypothesis, several research aircraft near a midwestern thunderstrom measured carbon monoxide, hydrocarbons, ozone, and reactive nitrogen compounds. Their concentrations were much greater in the outflow region of the storm, up to 11 kilometers in altitude, than in surrounding air. Trace gas measurements can thus be used to track the motion of air in and around a cloud. Thunderstorms may transform local air pollution problems into regional or global atmospheric chemistry problems.     

Rapid late Pleistocene incision of Atlantic passive-margin river gorges

The direct and secondary effects of rapidly changing climate caused large rivers draining the Atlantic passive margin to incise quickly into bedrock beginning about 35,000 years ago. Measured in samples from bedrock fluvial terraces, 10-beryllium shows that both the Susquehanna and Potomac Rivers incised 10- to 20-meter-deep gorges along steep, convex lower reaches during the last glacial cycle. This short-lived pulse of unusually rapid down-cutting ended by 13,000 to 14,000 years ago. The timing and rate of downcutting are similar on the glaciated Susquehanna and unglaciated Potomac Rivers, indicating that regional changes, not simply glacial meltwater, initiated incision.