超声波提取后，用原子吸收光谱法测定鱼饲料中的矿物元素

本研究推荐一种测定鱼饲料样品中钙、镁、锰、锌的方法，即采用超声波提取样品，然后用原子吸收光谱法（FAAS）进行后续的量化。提取液是0．10mol／L的HCl，建立的最佳萃取条件如下：100mg样品；样品粒度小于60μm；3个周期的超声时间为10s；超声功率为102W。这种方法运用于研究尼罗罗非鱼幼鱼日粮饲料样品中这些营养素的消化率。测得的结果与在金属养分提取过程中鱼饲料样品矿化结果一致。     

Cytogenomic characterization of Colletotrichum kahawae,the causal agent of coffee berry disease,reveals diversity in minichromosome profiles and genome size expansion

Colletotrichum kahawae is an emerging fungal pathogen, which has recently undergone a speciation process from a generalistic ‘C. gloeosporioides species complex' background by acquiring the unique capacity to infect green coffee berries, thus causing coffee berry disease. This is a severe and widespread disease in Africa and an imminent threat to Arabica coffee cultivation in Asia and America, if the pathogen enters those continents. Genetic diversity within C. kahawae is low but notorious differences in pathogen aggressiveness have been described. This work characterized two cytogenomic traits (genome size and minichromosome profiles) of a collection of C. kahawae isolates, representing the breadth of its genetic diversity and distinct aggressiveness classes, along with closely related taxa. The results obtained constitute the first flow cytometry‐based genome size estimation in the genus Colletotrichum and show a c. 8 Mb genome size expansion between C. kahawae (79·5 Mb on average) and its closest relatives (71·3 Mb), corroborating evidence indicating that C. kahawae (i.e. the coffee berry disease pathogens) should remain as a distinct species. Results have also shown the presence of two to five minichromosomes in C. kahawae, suggesting a positive relationship between the number of minichromosomes and the level of aggressiveness of the different isolates analysed, while no correlation could be established between aggressiveness and whole genome size. Overall, these results may be the basis for the identification of pathogenicity/aggressiveness‐related factors in such minichromosomes, and may provide clues to the characterization of specific markers for aggressiveness classes.     

Effect of supplementation of dietary fibre concentrates on biochemical parameters,stress response,immune response and skin mucus of jundiá (Rhamdia quelen)

The aim of this study was to assess the effects of different dietary fibre concentrates (DFC: Mucilage = MG; pectin = PN or β‐glucan+mannan = βg+M), on biochemical parameters, stress and immune response and skin mucus of jundiá (Rhamdia quelen). The fish (7.16 ± 0.06 g) were fed with Control diet (0 g/kg of DFC); diet supplemented with 5 g/kg of commercial prebiotic (CP 5) or diets supplemented with 5 or 10 g/kg of MG; PN or βg+M. After 8 weeks of the feeding trials, biochemical parameters (cholesterol, glucose, albumin and total protein), cortisol, immunoglobulin IgM and mucoproteins of skin mucus were assessed. Results demonstrated that supplementation with PN increased cholesterol levels (p<.05). After application of the stressor, most fish, except those in the PN and 10 g/kg MG groups, showed significant increases (p<.05) in cholesterol, glucose and albumin levels. The jundiás showed no difference in cortisol levels after application of the stressor (p>.05). IgM levels were significantly high in fish supplemented with DFC (p<.05). However, the concentration of mucoproteins in skin mucus was not influenced in the different treatments (p>.05). The results showed that supplementation with DFC promoted beneficial effects on the metabolism of jundiá.     

Genetic characterisation of olive trees from Madeira Archipelago using flow cytometry and microsatellite markers

In this study, native olive plants from Olea maderensis (≡ O. europaea ssp. cerasiformis) and O. cerasiformis (≡ O. europaea ssp. guanchica), wild olives (O. europaea ssp. europaea var. sylvestris) and cultivated olives (O. europaea ssp. europaea var. europaea) were analysed with respect to genome size and microsatellite markers. The mean nuclear DNA content of O. maderensis was estimated as 5.97 ± 0.191 pg/2C, while the remaining studied taxa presented mean genome sizes ranging from 2.99 to 3.18 pg/2C. These data and the obtained simple sequence repeats (SSR) profiles, i.e., with 2–4 alleles in O. maderensis and a maximum of two alleles in the other taxa, enabled the identification of a new ploidy level, tetraploidy, for a species belonging to the Olea genus. Cluster analysis of the microsatellite data revealed a clear separation of each species in different clusters and a high genetic dissimilarity could be observed among genotypes belonging to different species. This work contributed to a better characterization of olive species and the obtained data can be helpful to support taxonomic studies, and to develop germplasm preservation strategies in endangered populations of O. maderensis from Madeira Archipelago.     

OMNICROP – an integrated systems alternative to ideal crop site localization and cultivation chamber self-management utilizing machine learning

OMNICROP uses a database composed of labeled data, such as light quality and quantity, general climate characteristics, and soil quality, from successful farming sites to sort and select the most successful crops for a particular set of circumstances. This process provides either earthbound farmers or off-world colonists with the a priori information needed to start successful, productive food production while preventing costly and time-consuming activities that derive from on-site experimentation. The model can also be directly linked to self-managing cultivation chambers, food seedling physiology assessment, and phytopathology treatment on Earth, and for deep space travel crop cultivation. Our results are derived from the comparison between five different algorithms, showing in this case the superiority of the algorithms based on ensemble of decision trees, especially the boosted trees, where our best estimator was the XGBoost. This project is an open source model where any user can input data and obtain results. Frequent reuse will assist the model with learning and continual self- recalibration, providing increasingly accurate results across time.     

Effects of Ethanol on Synthesis of Prostaglandin F2α in Bovine Females

Ethanol stimulates the production of prostaglandins in many species. The purpose of this study was to verify the effect of ethanol on the production of prostaglandin F2α (PGF2α) and luteolysis in bovine females. In the first experiment, Holstein cows at day 17 of the oestrous cycle were treated with 100% ethanol (0.05 ml/kg of body weight, IV; n = 5), saline (0.05 ml/kg of body weight, IV; n = 4) or synthetic prostaglandin (150 μg of D‐cloprostenol/cow, IM; n = 4). The plasma concentrations of 13, 14‐dihydro‐15‐keto PGF2α (PGFM; the main metabolite of PGF2α measured in the peripheral blood) were assessed by radioimmunoassay (RIA). There was an acute release of PGFM in response to ethanol comparing to other treatments (p ≤ 0.05). However, only cows treated with PGF2α underwent luteolysis. In the second experiment, endometrial explants of cross‐bred beef cows (n = 4) slaughtered at day 17 of the oestrous cycle were cultured for 4 h. During the last 3 h, the explants were cultured with medium supplemented with 0, 0.1, 1, 10 or 100 μl of 100% ethanol/ml. Medium samples were collected at hours 1 and 4 and concentrations of PGF2α were measured by RIA. Ethanol did not induce PGF2α production by the endometrium. In conclusion, ethanol does not cause luteolysis in cows because it stimulates production of PGF2α in extra‐endometrial tissues.     

Soil Classification and Carbon Storage in Cacao Agroforestry Farming Systems of Bahia,Brazil

Information concerning the classification of soils and their properties under cacao agroforestry systems of the Atlantic rain forest biome region in the Southeast of Bahia, Brazil is largely unknown. Soil and climatic conditions in this region are favorable for high soil carbon storage. This study is aimed to classify soils under cacao agroforestry and further, to quantify carbon stocks in these soil profiles. Soil classification was performed, and the amount of C stored was estimated, based on the thickness of the soil horizons, their bulk density, and total organic carbon stored. In the sites studied under cacao, four general classes of soils were identified: Ultisols, Oxisols, Alfisols, and Inceptisols. Carbon stocks in these soil profiles showed wide variation, ranging from 719.24 to 2089.93 Mg ha^?1. Carbon stocks in soil surface and subsurface layers in different agroforestry systems with cacao (cacao cabruca, cacao?×?rubber tree, and cacao?×?erythrina) were comparable; however, total storage of organic C in these soils was higher than expected, compared to values reported for the International Soil Reference and Information Center (ISRIC), based on the FAO-UNESCO database, and were also higher than estimated regional soil data.     

Detection of Helicobacter and Campylobacter spp. from the aquatic environment of marine mammals

The mechanism by which Helicobacter species are transmitted remains unclear. To examine the possible role of environmental transmission in marine mammals, we sought the presence of Helicobacter spp. and non-Helicobacter bacteria within the order Campylobacterales in water from the aquatic environment of marine mammals, and in fish otoliths regurgitated by dolphins. Water was collected from six pools, two inhabited by dolphins and four inhabited by seals. Regurgitated otoliths were collected from the bottom of dolphins' pools. Samples were evaluated by culture, PCR and DNA sequence analysis. Sequences from dolphins' water and from regurgitated otoliths clustered with 99.8-100% homology with sequences from gastric fluids, dental plaque and saliva from dolphins living in those pools, and with 99.5% homology with H. cetorum. Sequences from seals' water clustered with 99.5% homology with a sequence amplified from a Northern sea lion (AY203900). Control PCR on source water for the pools and from otoliths dissected from feeder fish were negative. The findings of Helicobacter spp. DNA in the aquatic environment suggests that contaminated water from regurgitated fish otoliths and perhaps other tissues may play a role in Helicobacter transmission among marine mammals.