<Emphasis Type="Italic">Arcobacter</Emphasis> spp. in fecal samples from Brazilian farmed caimans (<Emphasis Type="Italic">Caiman yacare</Emphasis>, Daudin 1802)

The aim of this study was to perform the identification and molecular characterization of Arcobacter cryaerophilus and Arcobacter butzleri isolated from caiman (Caiman yacare), kept at a production farm, in Brazil. Forty fecal samples were analyzed. After isolation and identification, 21/40 strains of A. butzleri and 19/40 strains of A. cryaerophilus were subjected to PCR for potential virulence gene detection. The results of the PCR showed 38/40 strains positive for the cadF, cj1349, ciaB, and tlyA genes, 39/40 strains positive for the pldA gene, and 40/40 strains positive for the mviN gene. None of the strains presented the irgA gene. Hemagglutinin (hecA gene) and hemolysin (hecB) genes were detected in 21/40 and 16/40 strains, respectively. The SE-AFLP showed a great genetic diversity, but some clonally groups were disseminated in various tanks. These data reveal that the strains presented the same virulence traits described from Arcobacter isolated from food-borne disease in humans.     

Mode of action of novel 2-(benzylamino)-4-methyl-6-(trifluoro- methyl)-1,3,5-triazine herbicides: inhibition of photosynthetic electron transport and binding studies.

Novel 2-(benzylamino)-4-methyl-6-(trifluoromethyl)-1,3,5-triazines have the same 1,3,5-triazine skeleton as atrazine, although some of them, for example, 2-(3-chlorobenzylamino)-4-methyl-6-(trifluoromethyl)-1,3,5-tria zin e [pI(50)(spinach) = 7.21], show a >3 times stronger photosynthetic electron transport inhibitory activity than atrazine [pI(50)(spinach) = 6.72]. The new triazines have only one amino group at the triazine ring, and their molecular shapes are different from atrazine. The replacement of the bound [(14)C]atrazine by 1,3,5-triazines was tested to determine whether the novel 1,3,5-triazine analogues exhibit the same binding pattern at the D1-protein as atrazine. It was found that [(14)C]atrazine bound to the D1-protein was replaced by the triazine tested by a clearly competitive interaction. Obviously, the novel 1,3,5-triazines are attached to the same binding niche as atrazine.     

Quantitative analysis of pyroglutamic acid in peptides.

A simplified and rapid procedure for the determination of pyroglutamic acid in peptides was developed. The method involves the enzymatic cleavage of an N-terminal pyroglutamate residue using a thermostable pyroglutamate aminopeptidase and isocratic HPLC separation of the resulting enzymatic hydrolysate using a column switching technique. Pyroglutamate aminopeptidase from a thermophilic archaebacteria, Pyrococcus furiosus, cleaves N-terminal pyroglutamic acid residue independent of the molecular weight of the substrate. It cleaves more than 85% of pyroglutamate from peptides whose molecular weight ranges from 362.4 to 4599.4 Da. Thus, a new method is presented that quantitatively estimates N-terminal pyroglutamic acid residue in peptides.     

Rapid degradation of carbaryl by two novel strains ofArthrobacter spp. isolated from forest soil

Carbaryl is one of the carbamate insecticides widely used in agricultural fields and forests. To restore the environment contaminated with carbaryl application, it is suggested that microbial degradation of carbaryl could be an effective method. Two novel bacterial strains degrading rapidly carbaryl were isolated from forest soil. These strains designated as 19B and 19C were identified as novel species ofArthrobacter, respectively based on main bacterial properties including GC-content, major fatty acid composition, major menaquinone isoprenologue and 16S rRNA gene sequence analysis. Strain 19B started to degrade carbaryl within several hours and completely degraded 50μg/ml carbaryl in a mineral salt medium within a day. Similarly, strain 19C showed a high degradation ability. Gas chromatography-mass spectrometry analysis showed that the major degradation metabolite is 1-naphthol (M=144) and minor metabolites are 1,4-naphthalenedione (M=158) and 1,4-naphthalenediol (M=160), suggesting a pathway of carbaryl degradation by both strains. This research was supported by a Grant-in-Aid from the Ministry of Agriculture, Forestry and Fisheries, Japan.     

Salmonella typhimurium infection in domesticated fowl in a children's zoo.

Salmonella typhimurium infection occurred in a children's zoo where 11 fowl and 85 mammals were kept. Initially, the guinea pigs were infected and transmitted the infection to the fowl and rabbits. These mammals responded to medication and cleared of the infection; however, the birds were judged to contain excreters despite four regimens of treatment with antibiotics. Cloacal swabs were taken from all the birds. One turkey was positive for Salmonella and was destroyed. Pooled fecal samples from the birds were again positive. All the birds were tested serologically, and two birds, a goose and a turkey, were positive with Salmonella pullorum-gallinarum antigen, which was assumed to be a cross reaction with S. typhimurium antigen. The two birds were destroyed and the goose yielded Salmonella. The infection was finally eradicated, and the serologic examination was considered to be the most useful procedure for detection of the excreters.     

Typing Listeria monocytogenes by random amplified polymorphic DNA (RAPD) fingerprinting.

Twenty epidemiologically unrelated Listeria monocytogenes strains isolated from different animals, locations and on different dates in Japan were classified into 18 types by the random amplified polymorphic DNA (RAPD) fingerprinting technique with four primers. Further, seven epidemiologically related L. monocytogenes strains isolated from raw milk and a bulk tank on a dairy farm represented the same RAPD type suggesting that they were all of the same origin. Therefore, RAPD-polymerase chain reaction (PCR) analysis, which is rapid, simple and inexpensive to perform, can be used in surveys as a convenient epidemiological technique.     

Variance of actual inbreeding derived from the number and variance of chromosome segment

The inbreeding coefficient (F) is used as a central parameter inferring a proportion of alleles identical by descent within an individual and by genetic variability within a population. The actual inbreeding coefficient varies around a central value, the inbreeding coefficient. C ockerham and W eir (1983) derived the method for computing the variance of inbreeding while reviewing several other methods. The variance of inbreeding in their report was considered to be of two components: one within population and the other between population of varied pedigrees. If pedigree is fixed, F is easily computed for an individual by the standard method (F alconer 1989). For domestic animals, pedigree information is usually available because it is requisite for a programme of genetic improvement. In this study, the variance of inbreeding coefficient was derived for an individual with a pedigree having a single path to a foundation animal.     

A "Green" route to adipic acid: direct oxidation of cyclohexenes with 30 percent hydrogen peroxide

Currently, the industrial production of adipic acid uses nitric acid oxidation of cyclohexanol or a cyclohexanol/cyclohexanone mixture. The nitrous oxide emission from this process measurably contributes to global warming and ozone depletion. Therefore, the development of an adipic acid production process that is less damaging to the environment is an important subject in chemical research. Cyclohexene can now be oxidized directly to colorless crystalline adipic acid with aqueous 30 percent hydrogen peroxide under organic solvent- and halide-free conditions, which could provide an ideal solution to this serious problem.     

Effect of halomethyl-1,3,5-triazines on nitrification of ammonia

Nitrification inhibitory activity of halomethyl-1,3,5-triazines was determined by measuring the inhibitory activities on ammonia-oxidation to nitrate (NO₃⁻-N) in an upland soil and on ammonia-oxidation to nitrite (NO₂⁻-N) by Nitrosomonas europaea ATCC 25978 (ATCC) and Nitrosomonas sp TK 794 (TK). Within the chlorinated trimethyl-1,3,5-triazines, those bearing at least one trichloromethyl group inhibited nitrification more strongly, both in soil and in cell suspension of ATCC, than other mono- or dichlorinated methyl-1,3,5-triazines. Introduction of an amino group to 2,4,6-tris(trichloromethyl)-1,3,5-triazine gave 10- and 100-fold increases of nitrification inhibitory activity in soil and ATCC cell culture, respectively. Within the trihalomethyl-1,3,5-triazines, those having tribromomethyl group(s) exhibited rather weaker nitrification inhibition in soil than the corresponding trichloromethyl-1,3,5-triazines, although they showed a strong inhibition in cell suspension. Ammonium oxidation in ATCC was inhibited more strongly than that in TK. In QSAR studies, the optimum log P values were calculated as c 4.30. By using this value it will become possible to design highly active trichloromethyl-1,3,5-triazine nitrification inhibitors.     

Convenient Method to Determine Free Fatty Acid of Rice Using Thin‐Layer Chromatography and Flame‐Ionization Detection System

A convenient method which possessed simplicity and high sensitivity was designed to investigate the changes in free fatty acid (FFA) of rice during storage using a thin‐layer chromatography and flame‐ionization detection (TLC/FID) system. In this method, two different solvent systems for TLC were used according to the purpose of experiments. Solvent system A (hexane and diethyl ether and acetic acid 80:20:1) was suitable to obtain a chromatogram showing the overall state of rice lipid degradation. Using solvent system A, the degradation of triglyceride or the increase in FFA during storage was clearly visualized as changes in the chromatogram. Solvent system B (hexane and acetic acid 100:1) was used to improve the low reproducibility of the TLC/FID method. When methyl stearate was used as an internal standard with solvent system B, high reproducibility of the FFA value was obtained, and very small changes were detectable in stored white milled rice. This method has small sample size and simple operation and is more sensitive than the standard titration method. Therefore, this seems to be an especially convenient method for small‐scale storage tests or for experiments using many samples.