An assessment of subsoil organic carbon stocks in England and Wales

It is estimated that half the soil carbon globally is in the subsoil, but data are scarce. We updated estimates of subsoil organic carbon (OC) in England and Wales made by Bradley et al. (2005) using soil and land‐use databases and compared the results with other published data. We estimated that the soils of England and Wales contained 1633, 1143 and 506 Tg of OC at 0–30, 30–100 and 100–150 cm depths, respectively. Thus, half of the soil OC was found below 30 cm depth. Peat soils accounted for the largest proportion, containing 44% of all the OC below 30 cm despite their small areal extent, followed by brown soils, surface‐water gley soils, ground‐water gley soils and podzolic soils. Peat soils had more than 25% of their profile OC per unit area in the 100–150 cm depth, whereas most other soils had <8% at this depth. The differences between soil types were consistent with differences in soil formation processes. Differences in depth distributions between land uses were small, but subsoil OC stocks in cultivated soils were generally smaller than in soils under grassland or other land uses. Data on subsoil OC stocks in the literature were scarce, but what there was broadly agreed with the findings of the above database exercise. There was little evidence by which to assess how subsoil OC stocks were changing over time.     

An isolated cryptococcal urinary tract infection in a cat

A male domestic shorthaired cat was presented for evaluation of stranguria and pollakiuria. A cryptococcal urinary tract infection (UTI) was diagnosed cytologically and via fungal culture. No evidence of systemic involvement was found. Chronic renal failure was a concurrent disease in this cat. Treatment consisted of oral fluconazole. Clinical signs resolved after 2 weeks of therapy, and fluconazole was discontinued after 6 months when negative urine culture results indicated resolution of the infection. This case demonstrates that correct identification of cryptococcal UTI allows for administration of therapy that can be associated with resolution of clinical signs.     

The impact of elbow and knee joint lesions on abnormal gait and posture of sows

Background

Joint lesions occur widespread in the Danish sow population and they are the most frequent cause for euthanasia. Clinically, it is generally impossible to differentiate between various types of non-inflammatory joint lesions. Consequently, it is often necessary to perform a post mortem examination in order to diagnose these lesions. A study was performed in order to examine the relation of abnormal gait and posture in sows with specific joint lesions, and thereby obtaining a clinical diagnostic tool, to be used by farmers and veterinarians for the evaluation of sows with joint problems.

Methods

The gait, posture and lesions in elbow- and knee joints of 60 randomly selected sows from one herd were scored clinically and pathologically. Associations between the scorings were estimated.

Results

The variables ''fore- and hind legs turned out'' and ''stiff in front and rear'' were associated with lesions in the elbow joint, and the variables ''hind legs turned out'' and ''stiff in rear'' were associated with lesions in the knee joint.

Conclusion

It was shown that specified gait and posture variables reflected certain joint lesions. However, further studies are needed to strengthen and optimize the diagnostic tool.     

Characteristics of Intact Wyoming Big Sagebrush Associations in Southeastern Oregon

The Wyoming big sagebrush (Artemisia tridentata ssp. wyomingensis [Beetle & A. Young] S.L. Welsh) alliance is the most extensive of the big sagebrush complex in the Intermountain West. There is a lack of information describing vegetation characteristics, diversity, and heterogeneity of the Wyoming big sagebrush alliance. We annually sampled 48 Wyoming big sagebrush plant communities over 10 yr to delineate major vegetation associations and describe their major vegetation characteristics including canopy cover, density, species richness, and yield. Six associations were identified on the basis of dominant or codominant perennial bunchgrass species, using MRPP analysis, and they included ARTRW8 (Wyoming big sagebrush)/PSSP6 (Pseudoroegneria spicata [Pursh] A. Löve, bluebunch wheatgrass), ARTRW8/ACTH7 (Achnatherum thurberianum [Piper] Barkworth, Thurber’s needlegrass), ARTRW8/FEID (Festuca idahoensis Elmer, Idaho fescue), ARTRW8/HECO26 (Hesperostipa comata [Trin. & Rupr.] Barkworth, needle-and-thread), ARTRW8/PSSP6-ACTH7, and ARTRW8/PSSP6-FEID-ACTH7. On average, PSSP6 and FEID associations had the highest total herbaceous cover and annual yields and the HECO26 and ACTH7 associations had the lowest. Perennial forb cover averaged over 5% in PSSP6 and FEID associations and ranged from 0.3% to 3.5% in the other associations. Sagebrush cover was greatest in ACTH7 and PSSP6-ACTH7 and lowest in FEID and HECO26 associations. Habitat suitability criteria for sage-grouse indicated that Wyoming big sagebrush associations at the stand/site level will generally not meet breeding habitat requirements and only attain suitable habitat requirements for other life stages about 50% of the time.     

Low prevalence of zoonotic multidrug‐resistant bacteria in veterinarians in a country with prudent use of antimicrobials in animals

The occurrence of multidrug‐resistant zoonotic bacteria in animals has been increasing worldwide. Working in close contact with livestock increases the risk of carriage of these bacteria. We investigated the occurrence of extended‐spectrum beta‐lactamase (ESBL) and plasmidic AmpC beta‐lactamase producing Enterobacteriaceae (ESBL/pAmpC‐PE) and livestock‐associated methicillin‐resistant Staphylococcus aureus (LA‐MRSA) in Finnish veterinarians (n = 320). In addition to microbiological samples, background information was collected. Bacterial whole genome sequencing was performed to deduce sequence types (STs), spa types and resistance genes of the isolates. In total, 3.0% (9/297) of the veterinarians carried ESBL producing Escherichia coli, with one ESBL producing E. coli isolate producing also AmpC. Seven different STs, sequences of several different plasmid groups as well as several different bla_ESBL/pAmpC genes existed in different combinations. No carbapenemase or colistin resistance genes were detected. MRSA was detected in 0.3% (1/320) of the samples. The strain belonged to LA‐MRSA clonal complex (CC) 398 (ST398, spa type 011, lacking Panton‐Valentine leukocidin genes). In conclusion, this study shows low carriage of multidrug‐resistant zoonotic bacteria in Finnish veterinarians. However, finding LA‐MRSA for the first time in a sample from a veterinarian in a country with prudent use of animal antimicrobials and regarding the recent rise of LA‐MRSA on Finnish pig farms, a strong recommendation to protect people working in close contact with animals carrying LA‐MRSA CC398 is given. Further studies are needed to explain why the prevalence of LA‐MRSA in veterinarians is lower in Finland than in other European countries.     

Eighty Years of Grazing by Cattle Modifies Sagebrush and Bunchgrass Structure

Grazing by cattle is ubiquitous across the sagebrush steppe; however, little is known about its effects on sagebrush and native bunchgrass structure. Understanding the effects of long-term grazing on sagebrush and bunchgrass structure is important because sagebrush is a keystone species and bunchgrasses are the dominant herbaceous functional group in these communities. To investigate the effects of long-term grazing on sagebrush and bunchgrass structure, we compared nine grazing exclosures with nine adjacent rangelands that were grazed by cattle in southeast Oregon. Grazing was moderate utilization (30 ? 45%) with altering season of use and infrequent rest. Long-term grazing by cattle altered some structural aspects of bunchgrasses and sagebrush. Ungrazed bunchgrasses had larger dead centers in their crowns, as well as greater dead fuel depths below and above the crown level compared with grazed bunchgrasses. This accumulation of dry fuel near the meristematic tissue may increase the probability of fire-induced mortality during a wildfire. Bunchgrasses in the ungrazed treatment had more reproductive stems than those in the long-term grazed treatment. This suggests that seed production of bunchgrasses may be greater in ungrazed areas. Sagebrush height and longest canopy diameter were 15% and 20% greater in the ungrazed compared with the grazed treatment, respectively. However, the bottom of the sagebrush canopy was closer to the ground in the grazed compared with the ungrazed treatment, which may provide better hiding cover for ground-nesting avian species. Sagebrush basal stem diameter, number of stems, amount of dead material in the canopy, canopy gap size, and number of canopy gaps did not differ between ungrazed and grazed treatments. Moderate grazing does not appear to alter the competitive relationship between a generally unpalatable shrub and palatable bunchgrasses. Long-term, moderate grazing appears to have minimal effects to the structure of bunchgrasses and sagebrush, other than reducing the risk of bunchgrass mortality during a fire event.     

Voracious invader or benign feline? A review of the environmental biology of European catfish Silurus glanis in its native and introduced ranges*

A popular species for food and sport, the European catfish (Silurus glanis) is well‐studied in its native range, but little studied in its introduced range. Silurus glanis is the largest‐bodied freshwater fish of Europe and is historically known to take a wide range of food items including human remains. As a result of its piscivorous diet, S. glanis is assumed to be an invasive fish species presenting a risk to native species and ecosystems. To assess the potential risks of S. glanis introductions, published and ‘grey’ literature on the species’ environmental biology (but not aquaculture) was extensively reviewed. Silurus glanis appears well adapted to, and sufficiently robust for, translocation and introduction outside its native range. A nest‐guarding species, S. glanis is long‐lived, rather sedentary and produces relatively fewer eggs per body mass than many fish species. It appears to establish relatively easily, although more so in warmer (i.e. Mediterranean) than in northern countries (e.g. Belgium, UK). Telemetry data suggest that dispersal is linked to flooding/spates and human translation of the species. Potential impacts in its introduced European range include disease transmission, hybridization (in Greece with native endemic Aristotle’s catfish [Silurus aristotelis]), predation on native species and possibly the modification of food web structure in some regions. However, S. glanis has also been reported (France, Spain, Turkmenistan) to prey intensively on other non‐native species and in its native Germany to be a poor biomanipulation tool for top‐down predation of zooplanktivorous fishes. As such, S. glanis is unlikely to exert trophic pressure on native fishes except in circumstances where other human impacts are already in force. In summary, virtually all aspects of the environmental biology of introduced S. glanis require further study to determine the potential risks of its introduction to novel environments.     

Inheritance and reliability of random amplified polymorphic DNA-markers in two consecutive generations of common carp (Cyprinus carpio L.)

Random amplified polymorphic DNA (RAPD) markers have been used in a variety of genetic studies in fisheries and aquaculture. Most population studies are performed without preliminary data demonstrating the Mendelian inheritance and reproducibility of RAPD markers. In this study, the inheritance and reproducibility of RAPD markers was examined in two consecutive generations of common carp, Cyprinus carpio L. Variability and segregation of RAPD markers were investigated in one F₁ progeny and three F₂ progenies. Seventy-four RAPD markers were generated by five primers using DNA extracted from the initial ornamental (koi) common carp female and wild-type colour common carp male. Fifty-five of these RAPD markers were transmitted to the F₁ progeny and the inheritance patterns were analysed. Twenty RAPD markers were fully reproducible and demonstrated dominant simple Mendelian inheritance patterns in two consecutive generations. Twenty-four RAPD markers were not reproducible in all progenies. Thirteen markers displayed inheritance ratios in the progenies that did not fit simple Mendelian inheritance patterns. Non-reproducibility of RAPD markers and distorted ratios may be caused by the absence of amplification, poor amplification or by the appearance of artefact bands. Random amplified polymorphic DNA markers with poor reproducibility and non-Mendelian inheritance can lead to misinterpretations of data in population studies, resulting in errors in the estimation of genetic diversity within and between individual populations. Therefore, it is recommended to first identify the set of reproducible RAPD markers that demonstrate Mendelian inheritance before application of the RAPD technique in population studies.