Sources of Heavy Metals and Their Long-term Effects on Microbial C, N and P Relationships in Soil

The effects of heavy metals (Zn, Pb, and Cu) on microbial biomass C, N, and P were assessed in soils contaminated over a wide range by sewage sludge, exhaust dust deposition of a lead factory and river sediments of mining residues. Microbial biomass C, N, and P did not show any clear heavy metal effect related to soil dry weight. Also the ratios of microbial biomass C/N and biomass C/P remained unaffected by heavy metals. The ratios of microbial biomass C/soil organic C, biomass N/total N, and biomass P/total P were all negatively affected by increasing concentrations of Zn, Pb, and Cu as detected by a source-specific analysis of covariance using the different heavy metal fractions as covariate. Negative effects of Zn on the ratios microbial biomass C/soil organic C and biomass N/total N increased with increasing metal solubility in the order: (X-ray fluorescence analysis) XFA-detectable <HNO₃ <EDTA ?NH₄NO₃-extractable Zn. The Zn effects on the microbial biomass N/total N were always smaller than those on the microbial biomass C/soil organic C ratio. The same was true for all effects of the Pb and Cu fractions on these two ratios. For this reason, the deposition of highly soluble Zn and Pb by exhaust dust has the most negative effects, although sediments contained the maximum total burden of Zn and Pb. All fractions of Zn, Pb, and Cu had similar negative effects on the microbial biomass P/total P ratio, although the NH₄NO₃-extractable fraction again showed the most pronounced effects.     

Arbuscular mycorrhizae and phosphate solubilising bacteria of the rhizosphere of the mangrove ecosystem of Great Nicobar island, India

Mangroves form an important ecosystem of Great Nicobar, a continental island in the Bay of Bengal with luxuriant tropical rainforests. The rhizosphere of the mangrove plants of Great Nicobar was investigated for the presence of arbuscular mycorrhizal fungus (AMF) and phosphate solubilising bacteria (PSB). The soils of the Great Nicobar mangroves were silt–clays and were poor in phosphate content. Five species of AMF belonging to the genus Glomus were isolated. The %AMF colonization in the mangrove plants was between 0 and 17%, and the presence of AMF in the aerenchymatous cortex suggests that the mangrove plants may be aiding in AMF survival by providing oxygen. Two strains of phosphate solubilising Pseudomonas aeruginosa were found in the mangrove soils of Great Nicobar. Phosphate solubilisation by the two isolated strains was almost 70% under in vitro conditions. PSB may play a role in the mangrove ecosystems of Great Nicobar by mobilising insoluble phosphate. The plant roots could pick up the released phosphate directly or with the aid of AMF hyphae.     

InfoCrop: A dynamic simulation model for the assessment of crop yields,losses due to pests,and environmental impact of agro-ecosystems in tropical environments. I. Model description

The problems of agriculture in many tropical countries are gradually becoming more intense due to increasing food demand led by population growth, stagnation in farm productivity, mounting yield losses due to multiple pests, increasing vulnerability to global environmental changes and the need to reduce emission of greenhouse gases. Tools and techniques are needed to assist in developing strategies that can lead to higher food production, prevent crop production losses, and ensure minimal greenhouse gas emissions while maintaining soil fertility. Several dynamic models have been developed in recent past but most of these are generally strong either in soils and crops, or in greenhouse gases (GHG) emissions. Pest induced yield losses, a critical issue in the tropics, is not addressed in most models. InfoCrop, a generic dynamic crop model, has been developed to meet these specific requirements. It provides integrated assessment of the effect of weather, variety, pests, soil and management practices on crop growth and yield, as well as on soil nitrogen and organic carbon dynamics in aerobic as well as anaerobic conditions, and greenhouse gas emissions. The model considers the key processes related to crop growth, effects of water deficit, flooding, nitrogen management, temperature and frost stresses, crop–pest interactions, soil water and nitrogen balance and (soil) organic carbon dynamics. Its general structure relating to basic crop growth and yield is largely based on several earlier models, especially SUCROS series, and is written in Fortran Simulation Environment (FSE) programming language. The model has been validated for dry matter and grain yields of several annual crops, losses due to multiple diseases and pests, and emissions of carbon dioxide, methane and nitrous oxide in a variety of agro-environments. To increase the applications of model in research and development, an extremely simple menu driven version of InfoCrop has also been developed. The users of this version do not need any background in programming.     

Antimicrobial resistance in enteric pathogens isolated from Minnesota pigs from 1995 to 2004

This study investigated the occurrence and antimicrobial resistance profiles of Escherichia coli and Salmonella sp. isolated from swine samples submitted to the Minnesota Veterinary Diagnostic Laboratory (MVDL) in Saint Paul, Minnesota from 1995 to 2004. During this time period, a total of 5072 E. coli and 2793 Salmonella sp. was isolated. Most of these isolates were found to be resistant to the tetracycline and beta-lactam group of antibiotics. Resistance to spectinomycin was also frequently observed. An increasing trend in ampicillin resistance and a decreasing trend in apramycin resistance were seen in both pathogens, although ampicillin resistance was relatively higher in E. coli than in Salmonella. Aminoglycoside (amikacin) and quinolone (enrofloxacin) were the only antimicrobials to which minimum or no resistance was observed. The resistance of pig pathogens to several antibiotics indicates the need to routinely monitor the use of these antimicrobials and their associated resistance in pig populations.     

Superior CMS (<Emphasis Type="Italic">Ogura</Emphasis>) lines with better combining ability improve yield and maturity in cauliflower (<Emphasis Type="Italic">Brassica oleracea</Emphasis> var. <Emphasis Type="Italic">botrytis</Emphasis>)

Three CMS lines, Ogu1A, Ogu2A and Ogu3A were selected among ten lines after BC₇ based on superior commercial, floral and seed setting traits. Introgression of sterile Ogura cytoplasm in cauliflower nuclear background reduced the flower size but did not affect commercial and seed setting traits drastically. Line × Tester analysis was done by taking these three CMS lines free from floral deformities as female parent with nine diverse lines of snowball cauliflower as tester. The parent Ogu2A exhibited highest GCA effect for curd yield (4.51) and harvest index (1.97) while Ogu1A exhibited highest GCA for earliness (−2.73). The parent, Ogu2A exhibited significant GCA for curd length (0.39) while, none of the CMS lines showed significant GCA for curd diameter and depth. Heterosis for curd yield was highest in the hybrid, Ogu2A × Kt-22 (63.5%) followed by Ogu1A × WF (36.9%) and Ogu1A × Kt-15 was the best hybrid for earliness followed by Ogu3A × Kt-22 with heterosis of −14.4% and −11.7%. However, the number of heterotic hybrids for yield and earliness was low indicating narrow genetic base of the snowball cauliflower.     

Simulation of rice planthopper damage for developing pest management decision support tools

Rice planthoppers' damage on Pusa Basmati 1 cultivar was simulated with InfoCrop, a generic crop growth simulation model. The model was calibrated and validated with two experimental data sets on planthopper population and rice yield that were generated through differential insecticide application during the rainy season 2006 and 2007. Simulated yield and total dry matter (TDM) in various treatments over the two experiments were found to be proximal to the observed yields (R² = 0.972, RMSE = 4.61%) and TDM (R² = 0.949, RMSE = 3.25%), respectively. Likewise, the simulated yield and TDM losses were also respectively close to observed yield losses (R² = 0.938, RMSE = 13.53%) and TDM losses (R² = 0.835, RMSE = 19.12%), suggesting appropriate validation of planthopper damage mechanism on Pusa Basmati 1 rice. Economic injury levels (EILs) of planthoppers were simulated with two control expenditures involving two applications with each of monocrotophos and imidacloprid, and three market prices of Pusa Basamti 1 rice. The EIL exhibited a negative relationship with market value of produce but a positive one with expenditure on control measures. Simulated EILs were comparable to earlier established empirical EILs, indicating utility of simulation models for developing location specific EILs that may help in doing away with the use of blanket EILs. Iso-loss curves, devised through validated model, depicted combinations of crop age and planthopper population that resulted in similar yield losses. Both the EILs and iso-loss curves can be useful in monitoring planthopper populations and promoting judicious pesticide applications that would avoid unwarranted control expenditure and environmental contamination. The simulation models being based on detailed crop ecological and physiological processes and pest damage mechanism can thus aid in development of location-specific decision support tools and ensure precision in pest management decisions.     

Genetic structure of <Emphasis Type="Italic">Pyrenophora teres</Emphasis> f. <Emphasis Type="Italic">teres</Emphasis> and <Emphasis Type="Italic">P. teres</Emphasis> f. <Emphasis Type="Italic">maculata</Emphasis> populations from western Canada

Infection by Pyrenophora teres f. teres (Ptt) or P. teres f. maculata (Ptm), the causal agents of the net and spot forms of net blotch of barley, respectively, can result in significant yield losses. The genetic structure of a collection of 128 Ptt and 92 Ptm isolates from the western Canadian provinces of Alberta (55 Ptt, 27 Ptm), Saskatchewan (58 Ptt, 46 Ptm) and Manitoba (15 Ptt, 19 Ptm) were analyzed by simple sequence repeat (SSR) marker analysis. Thirteen SSR loci were examined and found to be polymorphic within both Ptt and Ptm populations. In total, 110 distinct alleles were identified, with 19 of these shared between Ptt and Ptm, 75 specific to Ptt, and 16 specific to Ptm. Genotypic diversity was relatively high, with a clonal fraction of approximately 10 % within Ptt and Ptm populations. Significant genetic differentiation (PhiPT = 0.230, P = 0.001) was found among all populations; 77 % of genetic variation occurred within populations and 23 % between populations. Lower, but still significant genetic differentiation (PhiPT = 0.038, P = 0.001) was detected in Ptt, with 96 % of genetic variation occurring within populations. No significant genetic differentiation (PhiPT = 0.010, P = 0.177) was observed among Ptm populations. Isolates clustered in two distinct groups conforming to Ptt or Ptm, with no intermediate cluster. The high number of haplotypes observed, combined with an equal mating type ratio for both forms of the fungus, suggests that P. teres goes through regular cycles of sexual recombination in western Canada.     

Simulation of leaf folder,Cnaphalocrocis medinalis (Guenee), damage on rice for developing decision support tools

Simulation models are synonymous with the application of the systems approach in pest management and help to formulate decision support tools for an effective decision-making. A study was undertaken to improve our earlier work on simulation of rice leaf folder (Cnaphalocrocis medinalis) damage and to develop decision support tools for its management. Currently, the leaf folder damage on Pusa Basmati1 rice was simulated with data sets generated in two field experiments during the rainy season 2008 and 2009. Simulated yields and total dry matter in different treatments over the experiments were close to their observed counterparts, indicating an appropriate validation of the leaf folder damage mechanisms on Pusa Basmati1 rice. The leaf folder economic injury levels were simulated based on control expenditure on application of cartap hydrochloride 50SP and quinalphos 25SC, and market price of Pusa Basamti1. The simulated economic injury levels of the leaf folder were more precise than that simulated in our previous study. Likewise, iso-loss curves represented combinations of crop age and the leaf folder damage that resulted in a similar yield loss. These decision support tools would facilitate accurate monitoring of the leaf folder damage to ensure judicious pesticide application.     

Decomposition of Zn-rich Arabidopsis halleri Litter in Low and High Metal Soil in the Presence and Absence of EDTA

Hyperaccumulating plants are increasingly investigated in combination with EDTA addition to soil for phytoremediation of heavy metal contaminated soils. A 60-day incubation experiment was carried out to investigate the effects of heavy metal release during the decomposition of Zn-rich (15.7 mg g^?1 dry weight) Arabidopsis halleri litter on C mineralization, microbial biomass C, biomass N, ATP, and adenylate energy charge (AEC). These effects were investigated in two soils with different Zn, Cu, and Pb levels, with and without EDTA addition to soil. The sole addition of Zn-rich A. halleri litter to the two soils did not increase the contents of NH₄NO₃ extractable Zn, only with the combined additions of EDTA and litter was there a considerable increase, being equivalent to three times the added amount in the low metal soil and to 50% in the high metal soil. Litter amendment increased the CO₂ evolved; being equivalent to 44% of the added C in the two soils, but EDTA addition had no significant effect on CO₂ evolution. Litter amendment resulted also in an 18% increase in microbial biomass C, 27% increase in ATP and 6% increase in AEC in the two soils, but EDTA had again no effect on these indices at both metal levels. In contrast, the sole addition of litter had no effect on microbial biomass N, but EDTA addition increased microbial biomass N on average by 49%. The application of EDTA for chelate-assisted phytoextraction should in the future consider the risk of groundwater pollution, which is intensified by resistance of EDTA to microbial decomposition.     

Low-cost interventions for big impacts in dryland production systems

A study at selected action sites in semi-arid region of Andhra Pradesh, India, showed widespread land degradation due to low levels of soil organic carbon (78% of fields) and deficiencies of available nutrients like phosphorus (34%), sulfur (93%), calcium (33%), zinc (84%), boron (73%), and copper (33%). Soil test-based addition of deficient micro- and macronutrients increased food grain production by 30–40% and straw (which is used as fodder) production by 10–30%. Micro-watershed scale low-cost cement-lined farm-ponds at smallholder farm level proved a scalable technology for drought-proofing of crops resulting into additional crop yield by more than 30% during 2015. Augmentation of water sources also facilitated farmers’ to successfully diversify the production system. Shared machinery resources improved the operational and economic efficiency of farm sowing operations through higher crop yields by around 10%. We conclude that a mix of low-cost critical interventions if out-scaled in a large number of dryland small holdings through policy support may not only improve productivity and livelihoods, but also enhance their abilities to effectively cope with the climatic aberrations.