340,000-year centennial-scale marine record of Southern Hemisphere climatic oscillation

In order to investigate rapid climatic changes at mid-southern latitudes, we have developed centennial-scale paleoceanographic records from the southwest Pacific that enable detailed comparison with Antarctic ice core records. These records suggest close coupling of mid-southern latitudes with Antarctic climate during deglacial and interglacial periods. Glacial sections display higher variability than is seen in Antarctic ice cores, which implies climatic decoupling between mid- and high southern latitudes due to enhanced circum-Antarctic circulation. Structural and temporal similarity with the Greenland ice core record is evident in glacial sections and suggests a degree of interhemispheric synchroneity not predicted from bipolar ice core correlations.     

Thermal conductivity of monolithic organic aerogels

The total thermal conductivity lambda of resorcinol-formaldehyde aerogel monoliths has been measured as a function of density rho in the range from rho = 80 to 300 kilograms per cubic meter. A record-low conductivity value in air at 300 K of lambda approximately 0.012 watt per meter per kelvin was found for rho approximately 157 kilograms per cubic meter. Caloric measurements under variation of gas pressure as well as spectral infrared transmission measurements allowed the determination of solid conductivity, gaseous conductivity, and radiative conductivity as a function of density. The development of such low conductivity materials is of great interest with respect to the substitution of environmentally harmful insulating foams made from chlorofluorocarbons.     

Microbial reefs in the Black Sea fueled by anaerobic oxidation of methane

Massive microbial mats covering up to 4-meter-high carbonate buildups prosper at methane seeps in anoxic waters of the northwestern Black Sea shelf. Strong 13C depletions indicate an incorporation of methane carbon into carbonates, bulk biomass, and specific lipids. The mats mainly consist of densely aggregated archaea (phylogenetic ANME-1 cluster) and sulfate-reducing bacteria (Desulfosarcina/Desulfococcus group). If incubated in vitro, these mats perform anaerobic oxidation of methane coupled to sulfate reduction. Obviously, anaerobic microbial consortia can generate both carbonate precipitation and substantial biomass accumulation, which has implications for our understanding of carbon cycling during earlier periods of Earth's history.     

Analytical performance and method comparison of a quantitative point-of-care immunoassay for measurement of bile acids in cats and dogs

Point-of-care analyzers (POCAs) for quantitative assessment of bile acids (BAs) are scarce in veterinary medicine. We evaluated the Fuji Dri-Chem Immuno AU10V analyzer and v-BA test kit (Fujifilm) for detection of feline and canine total serum BA concentration. Results were compared with a 5th-generation assay as reference method and a 3rd-generation assay, both run on a bench-top analyzer. Analytical performance was assessed at 3 different concentration ranges, and with interferences. For method comparison, samples of 60 healthy and diseased cats and 64 dogs were included. Linearity was demonstrated for a BA concentration up to 130 µmol/L in cats (r = 0.99) and 110 µmol/L in dogs (r = 0.99). The analyzer showed high precision near the lower limit of quantification of 2 µmol/L reported by the manufacturer. Intra- and inter-assay coefficients of variation were < 5% for both species and all concentrations. Interferences were observed for bilirubin (800 mg/L) and lipid (4 g/L). There was excellent correlation with the reference method for feline (r_s = 0.98) and canine samples (r_s = 0.97), with proportional biases of 6.7% and −1.3%, respectively. However, a large bias (44.1%) was noted when the POCA was compared to the 3rd-generation assay. Total observed error was less than total allowable error at the 3 concentrations. The POCA reliably detected feline and canine BA in clinically relevant concentrations.     

Consequences of sodium exclusion for the osmotic potential in the rhizosphere – Comparison of two maize cultivars differing in Na+ uptake

According to the biphasic model of growth response to salinity, growth is first reduced by a decrease in the soil osmotic potential (Ψ_o), i.e., growth reduction is an effect of salt outside rather than inside the plant, and genotypes differing in salt resistance respond identically in this first phase. However, if genotypes differ in Na⁺ uptake as it has been described for the two maize cultivars Pioneer 3906 and Across 8023, this should result in differences in Na⁺ concentrations in the rhizosphere soil solution and thus in the concentration of salt outside the plant. It was the aim of the present investigation to test this hypothesis and to investigate the effect of such potential differences in soil Ψ_o caused by Na⁺ exclusion on plant water relations. Sodium exclusion at the root surface of intact plants growing in soil was investigated by sampling soil solution from the rhizosphere of two maize cultivars (Across 8023, Pioneer 3906). Plants were grown in a model system, consisting of a root compartment separated from the bulk soil compartment by a nylon net (30 μm mesh size), which enabled independent measurements of the change of soil solution composition and soil water content with increasing distance from the root surface (nylon net). Across 8023 accumulated higher amounts of sodium in the shoot compared to the excluder (Pioneer 3906). The lower Na⁺ uptake in the excluder was partly compensated by higher K⁺ uptake. Pioneer 3906 not only excluded sodium from the shoot but also restricted sodium uptake more efficiently from roots relative to Across 8023. This was reflected by higher Na⁺ concentrations in the rhizosphere soil solution of the excluder 34 days after planting (DAP). The difference in Na⁺ concentration in rhizosphere soil solution between cultivars was neither due to differences in transpiration and thus in mass flow, nor due to differences in actual soil water content. As the lower Na⁺ uptake of the excluder (Pioneer 3906) was only partly compensated by increased uptake of K⁺, soil Ψ_o in the rhizosphere of the excluder was more negative compared to Across 8023. However, no significant negative effect of decreased soil Ψ_o on plant water relations (transpiration rate, leaf Ψ_o, leaf water potential, leaf area) could be detected. This may be explained by the fact that significant differences in soil Ψ_o between the two cultivars occurred only towards the end of the experiment (27 DAP, 34 DAP).     

Benefits and complications of maximum likelihood estimation in (composite) interval mapping methods using EM and ECM

Normal mixtures are applied in interval mapping to model the segregation of genotypes following Mendel's Law in successive generations of crossing. Standard methods use least squares or maximum likelihood estimates. Theoretically, maximum likelihood is known to result in more efficient estimates than least squares. In the interval mapping literature, some authors state that both methods yield equivalent results, whereas other authors emphasize the higher efficiency of maximum likelihood. The present paper investigates differences of both methods more closely. We show by example the occurrence of multiple LOD-Score profiles when applying maximum likelihood estimation methods for a basic interval mapping and composite interval mapping model. This analysis results in some peaks of the LOD-Score profile that distinctly differ from F-statistic profiles without being spurious. A spurious profile for IM and CIM was found as well. It is concluded that users of IM and CIM mapping software must be prepared for the rare occurrence of spurious solutions in LOD profiles. The example indicates that especially in sparse marker maps maximum likelihood estimation has a potential to result in non-spurious profiles that are not similar to the F-statistic profiles. However, the discrimination of spurious and non-spurious further profiles is not straightforward in applications. Until the mathematical background of this phenomenon is investigated more thoroughly and rules to ascertain the information content of these additional solutions have been developed, the simultaneous use of the least squares and ML methods may caution against the rare occurrence of spurious results. This revised version was published online in July 2006 with corrections to the Cover Date.     

Suitability of satellite remote sensing data for yield estimation in northeast Germany

Precision Agriculture - Information provided by satellite data is becoming increasingly important in the field of agriculture. Estimating biomass, nitrogen content or crop yield can improve farm...     

Concentration levels of zearalenone and its metabolites in urine, muscle tissue, and liver samples of pigs fed with mycotoxin-contaminated oats

The content of zearalenone and its metabolites in urine and tissue samples from pigs fed zearalenone-contaminated oats was established by analytical methods combining solid-phase extraction cleanup of the samples with highly selective liquid chromatography-mass spectrometry (LC-MS)/MS detection. Investigation of the urine samples revealed that approximately 60% of zearalenone was transformed in vivo to alpha-zearalenol and its epimer beta-zearalenol in a mean ratio of 3:1. Zeranol and taleranol as further metabolites could only be detected in trace amounts. Zearalanone was identified at considerable concentrations, though only in a couple of samples. In contrast, liver samples contained predominantly alpha-zearalenol, and to a minor extent beta-zearalenol and zearalenone, with a mean ratio of alpha-/beta-zearalenol of 2.5:1, while zeranol, taleranol, or zearalanone could not be identified in any of the investigated samples. The degree of glucoronidation was established for zearalenone as 27% in urine and 62% in liver; for alpha-zearalenol as 88% in urine and 77% in liver; and for beta-zearalenol as 94% in urine and 29% in liver. Analyses of muscle tissue revealed relatively high amounts of nonglucuronidated zeranol and alpha-zearalenol together with traces of taleranol and zearalenone, indicating that the metabolism of zearalenone and its metabolites is not restricted to hepatic and gastrointestinal metabolic pathways.     

Farm level risk factors associated with severity of post-weaning multi-systemic wasting syndrome

A cross-sectional study involving 147 pig farms across England was conducted in 2008-2009. Farm severity of post-weaning multi-systemic wasting syndrome (PMWS) was estimated through the use of an algorithm that combined data on post-weaning mortality, PMWS morbidity and proportion of porcine circovirus type 2 PCR positive pigs. Farms were classified as non/slightly, moderately or highly affected by PMWS. Data on potential PMWS risk factors were collected through interviews, on-farm assessment and serological sampling. Risk factors were identified using multivariable ordinal logistic regression and multivariable linear regression. Factors associated with increased PMWS severity were rearing growers indoors (OR=23.7), requiring a higher number of veterinarian visits per year (OR=9.6), having poorly isolated hospital pens (OR=6.4), buying replacement boars (OR=4.8) and seropositivity to Mycoplasma hyopneumoniae (OR=4.29); factors associated with decreased PMWS severity were low stocking density for growers (OR=0.07), adjusting diets at least three times between weaning and 14 weeks of age (OR=0.12), and requiring visitors to be at least 2 days pig free (OR=0.14). This study provides evidence of the association between environmental and management factors and PMWS severity, and suggests that other pathogens may be important co-factors for the disease. In addition, this study highlights the potential efficacy of biosecurity measures in the reduction/prevention of within-farm PMWS severity.