Numerical investigation of irrigation scheduling based on soil water status

Improving the sustainability of irrigation systems requires the optimization of operational parameters such as irrigation threshold and irrigation amount. Numerical modeling is a fast and accurate means to optimize such operational parameters. However, little work has been carried out to investigate the relationship between irrigation scheduling, irrigation threshold, and irrigation amount. Herein, we compare the results of HYDRUS 2D/3D simulations with experimental data from triggered drip irrigation, and optimize operational parameters. Two field experiments were conducted, one on loamy sand soil and one on sandy loam soil, to evaluate the overall effects of different potential transpiration rates and irrigation management strategies, on the triggered irrigation system. In both experiments, irrigation was controlled by a closed loop irrigation system linked to tensiometers. Collected experimental data were analyzed and compared with HYDRUS 2D/3D simulations. A system-dependant boundary condition, which initiates irrigation whenever the matric head at a predetermined location drops below a certain threshold, was implemented into the code. The experimental model was used to evaluate collected experimental data, and then to optimize the operational parameters for two hypothetical soils. The results show that HYDRUS 2D/3D predictions of irrigation events and matric heads are in good agreement with experimental data, and that the code can be used to optimize irrigation thresholds and water amounts applied in an irrigation episode to increase the efficiency of water use.     

Soil organic matter in water-stable aggregates under different soil management practices in a productive vineyard

In a productive vineyard, the influence of different soil management practices on carbon sequestration and its dynamic in water-stable aggregates of Rendzin Leptosol was studied. In 2006, an experiment of different management practices in a productive vineyard was established in the locality of Nitra-Dra?ovce, in the Nitra winegrowing area of Slovakia. The following treatments were established: (1) control (grass without fertilization); (2) T (tillage); (3) T + FM (tillage + farmyard manure); (4) G + NPK3 (grass + NPK 120–55–195 kg ha^?1); and (5) G + NPK1 (grass + NPK 80–35–135 kg ha^?1). The results showed that the lowest soil organic matter content (9.70 g kg^?1) in water-stable microaggregates was determined in G + NPK3, as well as in T. However, the highest soil organic matter content in the highest size fractions of water-stable macroaggregates (>5 mm) was observed in T + FM (19.7 g kg^?1). The highest value for carbon sequestration capacity in water-stable microaggregates was observed in the ploughed farmyard manure treatment. However, the control treatment showed the highest values for carbon sequestration capacity in water-stable macroaggregates, including agronomically favourable size fractions (0.5–3 mm). In all soil management practices under a productive vineyard the most intensive changes in the soil organic matter content were observed in the highest size fractions (>3 mm) of water-stable macroaggregates.     

Effects of the Polish Rootstocks P2 and P22 on Vigour,Yield and Fruit Characteristics of the Apple Cultivar ‘Gravenstein’

Abstract

The performance of the Polish rootstocks P2 and P22 under Norwegian growing conditions was evaluated over 10 years (1983–92). Tree vigour of the apple cultivar ‘Gravenstein’ on P2 and P22 was 64 and 16% of that on M9, respectively. Trees on P2 had the highest yield efficiency, but less total yield per tree than M9. Owing to very dwarfing growth, trees on P22 failed to establish a sufficient canopy and produced significantly smaller apples. P2 and P22 affected apple soluble solids in a favourable way, but did not influence fruit acidity.     

Treasuring crop wild relative diversity: analysis of success from the seed collecting phase of the ‘Adapting Agriculture to Climate Change’ project

The seed collecting phase of the ‘Adapting Agriculture to Climate Change’ project was, to the best of our knowledge, the most comprehensive crop wild relatives (CWR) collecting and conservation mission to-date and provides priceless genetic diversity for ongoing and future crop breeding efforts. The seed collecting started in 2013 and was concluded in 2019, it was carried out in 22 countries in Africa, Asia, the Americas and Europe, involving CWR taxa of 28 different crop genepools. 3002 target seed accessions of 242 taxa were collected and are currently stored long-term in the countries of collection and, in most of the cases, backed up at the Millennium Seed Bank (UK). Considering also non-target species, 3854 seed accessions were collected. For the genepools of bambara groundnut (Vigna subterranea (L.) Verdc.), barley (Hordeum L.), grass pea (Lathyrus sativus L.), sorghum (Sorghum bicolor (L.) Moench), and wheat (Triticum L.), the collecting phase was highly successful in terms of diversity of both, species and populations. Despite the overall success of the project, in our analysis we discovered several issues that were encountered in the seed collecting. In particular, comparing the initial collecting targets with the seed accessions effectively collected it emerges that: (1) some important crop genepools were characterized by a low collecting success (e.g. banana/plantain (Musa L.), potato (Solanum tuberosum L.), rice (Oryza L.), (2) genepool 1 (the most important for breeding efforts) of some crop genepools was under-collected (e.g. eggplant (Solanum L.) and sorghum), (3) some important centres of plant biodiversity (especially the Indian Subcontinent) were underrepresented in the seed collecting. This analysis can guide further collecting missions in order to fill gaps in the long-term conservation of CWR of great importance for crop improvement.

     

Soil heterogeneity at the field scale: a challenge for precision crop protection

Crop protection seldom takes into account soil heterogeneity at the field scale. Yet, variable site characteristics affect the incidence of pests as well as the efficacy and fate of pesticides in soil. This article reviews crucial starting points for incorporating soil information into precision crop protection (PCP). At present, the lack of adequate field maps is a major drawback. Conventional soil analyses are too expensive to capture soil heterogeneity at the field scale with the required spatial resolution. Therefore, we discuss alternative procedures exemplified by our own results concerning (i) minimally and non-invasive sensor techniques for the estimation of soil properties, (ii) the evidence of soil heterogeneity with respect to PCP, and (iii) current possibilities for incorporation of high resolution soil information into crop protection decisions. Soil organic carbon (SOC) and soil texture are extremely interesting for PCP. Their determination with minimally invasive techniques requires the sampling of soils, because the sensors must be used in the laboratory. However, this technique delivers precise information at low cost. We accurately determined SOC in the near-infrared. In the mid-infrared, texture and lime content were also exactly quantified. Non-invasive sensors require less effort. The airborne HyMap sensor was suitable for the detection of variability in SOC at high resolution, thus promising further progress regarding SOC data acquisition from bare soil. The apparent electrical conductivity as measured by an EM38 sensor was shown to be a suitable proxy for soil texture and layering. A survey of arable fields near Bonn (Germany) revealed widespread within-field heterogeneity of texture-related ECa, SOC and other characteristics. Maps of herbicide sorption and application rate were derived from sensor data, showing that optimal herbicide dosage is strongly governed by soil variability. A phytoassay with isoproturon confirmed the reliability of spatially varied herbicide application rates. Mapping areas with an enhanced leaching risk within fields allows them to be kept free of pesticides with related regulatory restrictions. We conclude that the use of information on soil heterogeneity within the concept of PCP is beneficial, both economically and ecologically.     

Microbial responses to fluctuation of soil aeration status and redox conditions

 The response of the microbial community to changes in aeration status, from oxic to anoxic and from anoxic to oxic, was determined in arable soil incubated in a continuous flow incubation apparatus. Soil incubated in permanently oxic (air) and/or anoxic (O₂-free N₂) conditions was used as the control. Before experiments soil was preincubated for 6 days, then aeration status was changed and glucose added. Glucose concentration, extractable C, CO₂ production, microbial biomass, pH and redox potential were determined 0, 4, 8, 12, 16, 24, 36 and 48 h after change of aeration status. If oxic conditions were changed to anoxic, the amount of glucose consumed was reduced by about 60%, and CO₂ production was 10 times lower at the end of incubation compared to the control (permanently oxic conditions). Microbial biomass increased by 114% in glucose-amended soil but did not change in unamended soil. C immobilization prevailed over C mineralization. Redox potential decreased from +627 mV to –306 mV. If anoxic conditions were changed to oxic, consumption of glucose and CO₂ evolution significantly increased, compared to permanently anoxic conditions. Microbial biomass did not change in glucose-amended soil, but decreased by 78% in unamended soil. C mineralization was accelerated. Redox potential increased from +238 to +541 mV. The rate of glucose consumption was low in anoxic conditions if soil was incubated in pure N₂ but increased significantly when incubation was carried out in a CO₂/N₂ mixture. Received: 6 January 1999     

Identification of resistant germplasm containing novel resistance genes at or tightly linked to the <Emphasis Type="Italic">Pi2/9</Emphasis> locus conferring broad-spectrum resistance against rice blast

Background

The rice Pi2/9 locus harbors multiple resistance (R) genes each controlling broad-spectrum resistance against diverse isolates of Magnaporthe oryzae, a fungal pathogen causing devastating blast disease to rice. Identification of more resistance germplasm containing novel R genes at or tightly linked to the Pi2/9 locus would promote breeding of resistance rice cultivars.

Results

In this study, we aim to identify resistant germplasm containing novel R genes at or tightly linked to the Pi2/9 locus using a molecular marker, designated as Pi2/9-RH (Pi2/9 resistant haplotype), developed from the 5′ portion of the Pi2 sequence which was conserved only in the rice lines containing functional Pi2/9 alleles. DNA analysis using Pi2/9-RH identified 24 positive lines in 55 shortlisted landraces which showed resistance to 4 rice blast isolates. Analysis of partial sequences of the full-length cDNAs of Pi2/9 homologues resulted in the clustering of these 24 lines into 5 haplotypes each containing different Pi2/9 homologues which were designated as Pi2/9-A5, ?A15, ?A42, ?A53, and -A54. Interestingly, Pi2/9-A5 and Pi2/9-A54 are identical to Piz-t and Pi2, respectively. To validate the association of other three novel Pi2/9 homologues with the blast resistance, monogenic lines at BC₃F₃ generation were generated by marker assisted backcrossing (MABC). Resistance assessment of the derived monogenic lines in both the greenhouse and the field hotspot indicated that they all controlled broad-spectrum resistance against rice blast. Moreover, genetic analysis revealed that the blast resistance of these three monogenic lines was co-segregated with Pi2/9-RH, suggesting that the Pi2/9 locus or tightly linked loci could be responsible for the resistance.

Conclusion

The newly developed marker Pi2/9-RH could be used as a potentially diagnostic marker for the quick identification of resistant donors containing functional Pi2/9 alleles or unknown linked R genes. The three new monogenic lines containing the Pi2/9 introgression segment could be used as valuable materials for disease assessment and resistance donors in breeding program.

     

Unambiguous identification of Ancylostoma caninum and Uncinaria stenocephala in Australian and New Zealand dogs from faecal samples

Hookworms (Ancylostomatidae) are well-known parasites in dogs due to their health impacts and zoonotic potential. While faecal analysis is the traditional method for detection, improvements in husbandry and deworming have decreased their prevalence in urban owned dogs. Drug resistance in Ancylostoma caninum is becoming a discussion point in small animal practices across the region. This study aimed to identify hookworm species present in Australian and New Zealand dogs using molecular techniques. The ITS-2 and isotype-1 β-tubulin assays were used to identify and quantify hookworm species. Results showed absence of coinfection in Australian samples from Greater Sydney region belonging either to A. caninum or Uncinaria stenocephala, while New Zealand samples were a mixture of A. caninum and U. stenocephala. The amplified isotype-1 β-tubulin sequences exhibited susceptibility to benzimidazole drugs. Rare mutations were identified in A. caninum and U. stenocephala sequences, representing a small percentage of reads. This study highlights the importance of molecular techniques in accurately identifying and quantifying hookworm species in dog populations.     

Levamisole and its influence on the immune response of lambs

Ten parasite-free lambs were drenched with 8 mg/kg of levamisole on days 0 and 28 and were injected with human erythrocytes and ovalbumin one day after each drench. Ten other antigen-injected lambs were not drenched with anthelmintic as controls. Lymphocytes from the control and drenched lambs were culturedin vitro with RPMI 1640 plus 5% fetal calf serum (FCS), with 50% autologous serum only, with concanavalin A (Con A) or with phytohaemagglutinin (PHA). Decreased blastogenesis was observed in cells from the drenched lambs cultured in the presence or absence of mitogen and was most obvious when 50% autologous serum was used, particularly with PHA, and when lymphocytes were collected 3 and 7 days after the first and 3 days after the second antigen injection. There were no significant changes in antibody titres between the groups. Decreased serum complement activity was seen 3 days after the second antigen injection in the drenched lambs. Although there was a significant reduction in the serum insulin-like growth factor I levels 4 days after each levamisole drench, the drenched lambs gained significantly more weight than the non-drenched control lambs.Abbreviations Con A concanavalin - EIA enzyme immunoassay - FCS fetal calf serum - GH growth hormone - IGF-I insulin growth factor I - PHA phytohaemagglutinin