Competition for shifting resources in the southern Benguela upwelling: Seabirds versus purse-seine fisheries

In the southern Benguela upwelling ecosystem off the west coast of South Africa, seabird populations are decreasing dramatically because of reduced availability of pelagic fish. We tested the hypothesis that the west coast fishing industry is competing for the remaining stocks of anchovy and sardine with the largest colony of Vulnerable Cape Gannets (Morus capensis) along the Atlantic coast. Using GPS-tracking of the birds, echo-sounding of pelagic fish, and vessel log books, we located overlap areas between bird foraging ranges, pelagic fish distribution, and fishing activities. We then compared fish catches by gannets and vessels within their joint foraging zones. In October 2007, purse-seine fishing grounds and gannet foraging areas overlapped by only 13%. However, for a 1-month period, the amount of fish removed from this area by purse-seine boats amounted to 41% of the food requirements of the 72,000 gannets breeding on Malgas Island (25% of the world population). The fishery’s catch in this area is significant in terms of its potential impact on gannets, but comprises only 3.6% of total fishery catch. Based on this finding, the rapidly decreasing size of the gannet colony and the stated objectives of South Africa’s Marine Living Resources Act of 1998, the case for considering and experimenting with at-sea ‘no-take’ areas for the purse-seine fishery is strong. Efforts to establish whether ‘no-take’ fishing zones increase food availability for top predators is an important next step in conservation of the southern Benguela Ecosystem.     

从多毛野生番茄中初步鉴定出一个抗美洲斑潜蝇的显性基因

美洲斑潜蝇(LiriomyzasativaeBlandchard)是危害番茄生产的主要害虫之一,从番茄近缘野生种中挖掘优异的抗斑潜蝇基因,并研究抗虫基因的遗传,是番茄抗虫遗传改良的重要基础。将筛选到的高抗美洲斑潜蝇的野生多毛番茄(L.hirsutum)材料LA2329,与高感美洲斑潜蝇栽培番茄早粉2号杂交,并用早粉2号为母本与杂种F1回交,通过对各世代抗斑潜蝇的人工接种鉴定,初步判定该抗性由单显性基因控制。番茄属中由单显性基因控制的对斑潜蝇抗性,目前尚未见报道。该抗性基因的发现,将为今后番茄抗斑潜蝇育种提供宝贵资源,有望在不远的将来通过标记辅助育种手段而引入栽培番茄,为我国番茄生产中害虫的防治提供环保、经济而有效的科技支撑。     

Classification of cassava into ‘bitter’ and ‘cool’ in Malawi: From farmers' perception to characterisation by molecular markers

Cassava roots, a major food in Africa, contain cyanogenic glucosides that may cause toxic effects. Malawian women farmers considered fields of seemingly similar cassava plants to be mixes of both ‘cool’ and ‘bitter’ cultivars. They regard roots from ‘cool’ cultivars as non-toxic. Roots of ‘bitter’ were considered to require extensive traditional processing done by women to be safe for consumption. But curiously, these women farmers preferred ‘bitter’ cultivars since toxicity confers protection against theft, which was a serious threat to the food security of their families. We studied how well these farmers comprehend the effects of genetic variations in cassava when dealing with cyanogenesis in this complex system. Using molecular markers we show that most plants farmers identified as belonging to a particular named cultivar had a genotype typical of that cultivar. Farmers' ethno-classification into ‘cool’ and ‘bitter’ cultivars corresponded to a genetic sub-division of the typical genotypes of the most common cultivars, with four-fold higher cyanogenic glucoside levels in the bitter cultivars. Examining morphology, farmers distinguished genotypes better than did the investigators when using a standard botanical key. Undoubtedly, these women farmers grasp sufficiently the genetic diversity of cassava with regard to cyanogenesis to simultaneously benefit from it and avoid its dangers. Consequently, acyanogenic cassava – the breeding of which is an announced good of some cassava genetic improvement programmes – is not a priority to these farmers. Advances in molecular genetics can help improve food supply in Africa by rapid micropropagation, marker assisted breeding and introduction of transgenic varieties, but can also help to elucidate tropical small-scale farmers' needs and skills. This revised version was published online in August 2006 with corrections to the Cover Date.     

Assessment of EST- and genomic microsatellite markers for variety discrimination and genetic diversity studies in wheat

It is likely that in the near future sequence information from sequencing programmes and EST libraries will generate an abundance of genic microsatellite markers. This study is focused on the assessment of their likely impact and performance vis-à-vis their genomic counterparts. Microsatellites from two sources were used to assess the genetic diversity in 56 old and new varieties of bread wheat on the UK Recommended List. A set of 12 microsatellite markers generated from genomic libraries and 20 expressed sequence tag (EST)-derived microsatellites were used in the study, and the performance of both marker sets assessed. The EST-derived or genic microsatellites delivered fingerprints of superior quality, amplifying clear products with few stutter bands. Diversity levels as revealed bygenic microsatellites are similar to the few published results. The PIC values for the genic markers were generally lower than those calculated for the genomic microsatellites, though advantages of both marker classes for variety identification applications are discussed. This revised version was published online in July 2006 with corrections to the Cover Date.     

Production protocol development for greenhouse cut Linaria, Lupinus, and Papaver flowers

Linaria maroccana Hook. f. Ann., ‘Lace Violet’, Lupinus hartwegii ssp. cruikshankii Lindl. ‘Sunrise’ and Papaver nudicaule L. ‘Meadow Pastels’ seeds were directly sown into 105 cell plug trays and received either ambient light or supplemental high intensity discharge (HID) lighting. For each species, a 2 × 3 × 3 factorial was used with two light intensities during propagation, three transplant stages, and three night temperatures. Seedlings were transplanted at the appearance of 2–3, 5–6, or 8–9 true leaves. Transplanted Linaria and Papaver seedlings were placed at 5/11, 10/16, or 15/21 ± 1 °C night/day temperatures and Lupinus seedlings were placed at 15/24, 18/25, or 20/26 ± 2 °C night/day temperatures. For this study, the optimum production temperature for Linaria was 10/16 °C as the cut stems produced at 15/21 °C were unmarketable and production time was excessively long at 5/11 °C. At 10/16 °C, Linaria seedlings should be transplanted at the 2–3 leaf stage to maximize stem number, stem length and profitability. For Lupinus the optimum temperature was 15/24 °C due to long stems and high profitability per plant. Lupinus seedlings should be transplanted at the 2–3 leaf stage when grown at 15/24 °C to obtain the longest and thickest stems; however, $/m² week was higher for plants transplanted at the 8–9 leaf stage due to less time in finishing production space. For Papaver, the 15/21 °C temperature was optimal as that temperature produced the longest stems in the shortest duration, resulting in the highest $/m² week. At 15/21 °C Papaver plants should be transplanted at the 2–3 leaf stage. Supplemental HID lighting had no effect on any of the species.     

Multi-scale use of lands providing anthropogenic resources by American Crows in an urbanizing landscape

The conversion of forests and farmlands to human settlements has negative impacts on many native species, but also provides resources that some species are able to exploit. American Crows (Corvus brachyrhynchos), one such exploiter, create concern due to their impact as nest predators, disease hosts, and cultural harbingers of evil. We used various measures of crow abundance and resource use to determine crows’ response to features of anthropogenic landscapes in the Puget Sound region of the United States. We examined land cover and land use composition at three spatial scales: study sites (up to 208 ha), crow home ranges within sites (18.1 ha), and local land cover (400 m²). At the study site and within-site scales crow abundance was strongly correlated with land cover providing anthropogenic resources. In particular, crows were associated with the amount of ‘maintained forest’ cover, and were more likely to use grass and shrub cover than forest or bare soil cover. Although crows did not show a generalized response to an edge variable, they exhibited greater use of patchy habitat created by human settlements than of native forests. Radio-tagged territorial adults used resources within their home ranges relatively evenly, suggesting resource selection had occurred at a larger spatial scale. The land conversion pattern of new suburban and exurban settlements creates the mix of impervious surfaces and maintained vegetation that crows use, and in our study area crow populations are expected to continue to increase. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Relative importance of habitat area and isolation for bird occurrence patterns in a naturally patchy landscape

There is debate among ecologists about whether total habitat area or patch arrangement contributes most to population and/or community responses to fragmented or patchy landscapes. We tested the relative effects of patch area and isolation for predicting bird occurrence in a naturally patchy landscape in the Bear River Mountains of Northern Utah, USA. We selected focal patches (mountain meadows) ranging in elevation from 1,920 to 2,860 m and in size from 0.6 to 182 ha. Breeding birds were sampled in each focal meadow during the summers of 2003 and 2004 using variable-distance point transects. Logistic regression and likelihood-based model selection were used to determine the relationship between likelihood of occurrence of three bird species (Brewer’s sparrow, vesper sparrow, and white-crowned sparrow) and area, isolation, and proximity metrics. We used model weights and model-averaged confidence intervals to assess the importance of each predictor variable. Plots of area versus isolation were used to evaluate complex relationships between the variables. We found that meadow area was the most important variable for explaining occurrence for two species, and that isolation was the most important for the other. We also found that the absolute distance was more appropriate for evaluating isolation responses than was the species-specific proximity metric. Our findings add clarity to the debate between ecologists regarding the relative importance of area and isolation in species responses to patchy landscapes.     

Application of sperm cryopreservation in selective breeding of the Pacific oyster,Crassostrea gigas (Thunberg)

The robustness of Pacific oyster, Crassostrea gigas (Thunberg), sperm cryopreservation in the context of selective breeding based on family lines was investigated. Irrespective of egg density, high fertilization success was achieved with cryopreserved sperm when sperm:egg ratios of 1000:1 to 10 000:1 were used. Variation among replicate runs on the same oyster batches was minimal, indicating that cryopreservation and larval rearing procedures were repeatable. Twenty independent single male–female crosses were made to assess the utility of cryopreserved sperm in selective breeding. The fertility of unfrozen sperm was generally a poor predictor of cryopreserved sperm fertility. Based on D‐larval yields, 17 of the 20 crosses were likely to yield adequate spat for selective breeding (>10⁵ D‐larvae from 1 million eggs), two were marginal (5 × 10⁴ D‐larvae) and one was inadequate (4 × 10³ D‐larvae). An alternative fertilization strategy to improve D‐yield from a given number of sperm was then tested. Fertilizing 10 million eggs at a sperm:egg ratio of 200:1 increased the total D‐yield when compared with fertilizing 1 million eggs at a sperm:egg ratio of 2000:1 for the same male–female pair. We conclude that, despite wide variation in fertility, cryopreserved sperm is useful for family production.     

Loggerhead turtle (Caretta caretta) bycatch in Canadian pelagic longline fisheries: Relative importance in the western North Atlantic and opportunities for mitigation

Little is known about the ecology of loggerhead turtles, Caretta caretta, in Canadian waters. However, Canada's eastern waters off the Scotian Shelf, Georges Bank and Grand Banks appear to be seasonal foraging habitats based on dates and locations where they have been captured as fishery bycatch. Estimates derived from data recorded by the international observer program (IOP) and used for this study suggest that thousands of mostly immature loggerheads have been captured in the Canadian pelagic longline fishery (PLF) in the western North Atlantic since 1999. These data suggest that the PLFs for tuna and swordfish are among the most important causes of incidental capture. Although U.S. and Canadian bycatch estimation methods differ and uncertainty associated with the estimates is high, it is clear from the IOP data that bycatch in the Canadian PLF is substantial and roughly within the same magnitude as that reported for the entire U.S. fleet in the North Atlantic for the same period (1999–2005). Analysis of bycatch observer data from the Canadian PLF and other empirical data suggests that fishing at temperatures below 20 °C using fish rather than squid bait and size-18 circle hooks could reduce loggerhead bycatch and mortality. However, research is needed to identify the best options and their commercial viability. Loggerheads that use Canadian Maritime waters are one of the least studied groups of loggerheads in the world, so systematic long-term studies on the ecology of loggerheads in Canada would help fill important information gaps and assist in developing effective recovery plans for this species.     

Energy and resource consumption of land-based Atlantic salmon smolt hatcheries in the Pacific Northwest (USA)

This paper evaluates the resource and energy requirements of six different types of land-based, hatchery production systems located in the U.S. Pacific Northwest: flow-through with a gravity water supply, flow-through with a pumped water supply, flow-through with pure oxygen, partial reuse system, partial reuse with heating, and a reuse system for the production of Atlantic salmon (Salmo salar) smolts. Key parameters used in the evaluation include direct energy, indirect energy, transportation energy, greenhouse gas emissions, and pollutant discharges.Power (electricity and natural gas) and feed energy accounted for the majority of the required energy for all the rearing option evaluated. The sum of the fixed capital and chemicals components accounted for less than 2–12% of the total energy budget for any rearing option. The energy efficiency (energy output/energy input) of the six options ranges from 0.97% for flow-through with pumped supply to 3.49% for the flow-through with gravity supply. The rearing options with the three highest energy efficiencies were flow-through with gravity supply (3.49%), partial reuse (2.75%), and reuse (2.64%).On a kg of smolt produced basis, the six rearing options showed a wide range in performance. The reuse system had the lowest water (2 m³ kg^− 1) and land (0.13 m² kg^− 1) requirements and the third lowest total energy requirement (288 MJ kg^− 1). The partial reuse system had the second lowest total power requirement (276 MJ kg^− 1), a low land requirement (0.21 m² kg^− 1), and moderate water requirements (33 m³ kg^− 1). The partial reuse with temperature control had the second highest total power requirement (657 MJ kg^− 1) and land and water requirements similar to the partial reuse system without temperature control. The flow-through system with pumped water supply had the highest water (289 m³ kg^− 1), land (2.19 m² kg^− 1), and energy requirements (786 MJ kg^− 1) of any of the rearing options. By comparison, the flow-through system with gravity water supply had the lowest energy requirement (218 MJ kg^− 1), a moderate land requirement (0.78 m² kg^− 1), and a high water requirement (214 m³ kg^− 1). The ranking of the six rearing options based capital and operating costs are likely to be quite different from those based on energy, water, and greenhouse gas emissions.