Roles of bootstrap resampling,measure of central tendency,and method for calculating thermal units when developing phenology models for pest management

The successful development of phenology models from field studies depends on many factors, some of which are entirely under the control of pest managers. For example, one such factor is the choice of method for calculating thermal units. In this study, we have demonstrated that four methods for calculating thermal units provided for acceptable predictions of one phenological event of one insect species, while another method for calculating thermal units did not. The measure of central tendency (mean or median) that is used to estimate lower developmental temperatures and required thermal summations is another factor that pest managers can control when developing phenology models from field studies. Here, we show that predictions that were made when using phenology models based on median lower developmental temperatures and median required thermal summations were superior to predictions that were made when using phenology models based on mean lower developmental temperatures and mean required thermal summations. The use of bootstrap vs. non-bootstrap estimates of lower developmental temperatures and required thermal summations is yet another factor that pest managers can control when developing phenology models from field studies. In this study, we found that calculating and using bootstrap estimates of lower developmental temperatures and required thermal summations in phenology models did not improve the predictions of one phenological event for one insect species. The implications of these and other findings are discussed.     

Seasonal variation and effects of wheat rotation on populations ofVerticillium dahliae Kleb. in Ohio potato field soils

Soil population levels ofVerticillium dahliae in Ohio were monitored from May–October, 1982–1985, in 15 fields in potato-wheat rotation and two fields in potato monoculture. Population levels in fields in rotation ranged from 0 to 86 microsclerotia/10 g of air-dried soil with average values during each 6-month sampling period of 9.7, 12.9, 9.6 and 19.6 microsclerotia/10 g of soil for 1982, 1983, 1984 and 1985, respectively. In at least 2/3 of the fields sampled each year, soil populations ofV. dahliae peaked in either July or August, regardless of whether fields were under wheat rotation or potato monoculture. Of the 15 fields under potato-wheat rotation, 13 showed a general pattern of increased populations ofV. dahliae in one or both years following cropping to potato. Among those 13, significantly higher populations (P < 0.05) were observed in one wheat field in 1983 and in eight fields in 1985. In the two fields in potato monoculture, one consistently had population levels ofV. dahliae 3–4 times higher than any other field sampled in this study. Factors that may contribute to periodic changes inV. dahliae populations, implications of these changes in interpreting soil population data, and usefulness of a potato-wheat rotation in managingV. dahliae populations in Ohio are discussed.     

Comparing accuracy of fish sperm motility measurements obtained from two computational extremes in tracking approaches: Nearest neighbor and multiple hypothesis tracking

We conducted a study to assess the accuracy of nearest neighbour (NN) and multiple hypothesis tracking (MHT) methods—which are opposite extremes in computational complexity—in determining the percentage of motile sperms and the number of sperms tracked in simulated data of fish sperm movements, and to evaluate the resulting number of tracking errors and analysis duration. Sperm tracking and swimming path assembly were assessed in 36 video clips (1 s length at 100 fps) of emulated Rhamdia quelen sperm kinetics at different densities (50, 100, 200 or 300 spermatozoa in the field of view) and motility rates (30, 60 or 90%). The MHT method accurately estimated the percentage of motile sperms, whereas NN underestimated it by up to 6.59%. Increase in sperm density reduced the number of sperms tracked from both trackers. With more than 50 sperms in the field of view, NN and MHT tracked 73% and 92% of the ground-truth sperm count, respectively. Both trackers showed a quadratic increase in tracking errors with increasing sperm density. The maximum percentage of errors at 90% motility was 12% for NN and 4.7% for MHT. The MHT tracker required up to 150 s to track 300 sperms, whereas NN completed the tracking procedure in less than 0.5 s. On maintaining a density of up to 100 sperms in the field of view, it was possible to obtain high accuracy, low number of tracking errors and an acceptable analysis duration with both tracking methods.     

Characterization of homologous and heterologous adaptive immune responses in porcine reproductive and respiratory syndrome virus infection

The present study characterized the homologous and heterologous immune response in type-I porcine reproductive and respiratory syndrome virus (PRRSV) infection. Two experiments were conducted: in experiment 1, eight pigs were inoculated with PRRSV strain 3262 and 84 days post-inoculation (dpi) they were challenged with either strain 3262 or strain 3267 and followed for the next 14 days (98 dpi). In experiment 2, eight pigs were inoculated with strain 3267 and challenged at 84 dpi as above. Clinical course, viremia, humoral response (neutralizing and non-neutralizing antibodies, NA) and virus-specific IFN-γ responses (ELISPOT) were evaluated all throughout the study. Serum levels of IL-1, IL-6, IL-8, TNF-α and TGF-β were determined (ELISA) after the second challenge. In experiment 1 primo-inoculation with strain 3262 induced viremia of ≤ 28 days, low titres of homologous NA but strong IFN-γ responses. In contrast, strain 3267 induced longer viremias (up to 56 days), higher NA titres (≤ 6 log₂) and lower IFN-γ responses. Inoculation with 3267 produced higher serum IL-8 levels. After the re-challenge at 84 dpi, pigs in experiment 1 developed mostly a one week viremia regardless of the strain used. In experiment 2, neither the homologous nor the heterologous challenge resulted in detectable viremia although PRRSV was present in tonsils of some animals. Homologous re-inoculation with 3267 produced elevated TGF-β levels in serum for 7–14 days but this did not occur with the heterologous re-inoculation. In conclusion, inoculation with different PRRSV strains result in different virological and immunological outcomes and in different degrees of homologous and heterologous protection.     

Effect of Saccharomyces cerevisiae var. Boulardii and β-galactomannan oligosaccharide on porcine intestinal epithelial and dendritic cells challenged in vitro with Escherichia coli F4 (K88)

ABSTRACT: Probiotic and prebiotics, often called "immune-enhancing" feed additives, are believed to deal with pathogens, preventing the need of an immune response and reducing tissue damage. In this study, we investigated if a recently developed β-galactomannan (βGM) had a similar protective role compared to Saccharomyces cerevisiae var. Boulardii (Scb), a proven probiotic, in the context of enterotoxigenic Escherichia coli (ETEC) infection. ETEC causes inflammation, diarrhea and intestinal damage in piglets, resulting in large economic loses worldwide. We observed that Scb and βGM products inhibited in vitro adhesion of ETEC on cell surface of porcine intestinal IPI-2I cells. Our data showed that Scb and βGM decreased the mRNA ETEC-induced gene expression of pro-inflammatory cytokines TNF-α, IL-6, GM-CSF and chemokines CCL2, CCL20 and CXCL8 on intestinal IPI-2I. Furthermore, we investigated the putative immunomodulatory role of Scb and βGM on porcine monocyte-derived dendritic cells (DCs) per se and under infection conditions. We observed a slight up-regulation of mRNA for TNF-α and CCR7 receptor after co-incubation of DC with Scb and βGM. However, no differences were found in DC activation upon ETEC infection and Scb or βGM co-culture. Therefore, our results indicate that, similar to probiotic Scb, prebiotic βGM may protect intestinal epithelial cells against intestinal pathogens. Finally, although these products may modulate DC activation, their effect under ETEC challenge conditions remains to be elucidated.     

Globalisation and global trade influence molecular viral population genetics of Torque Teno Sus Viruses 1 and 2 in pigs

Globalisation, in terms of the rapid and free movement of people, animals and food, has created a new paradigm, increasing the range and rate of distribution of many pathogens. In the present study, Torque teno sus viruses (TTSuVs) have been used as a model to evaluate the effects of global trade on viral heterogeneity, and how the movement of live pigs can affect the distribution and composition of virus populations. Seventeen countries from different parts of the world have been screened for TTSuV1 and TTSuvV2. High levels of genetic diversity have been found as well as two new TTSuV subtypes. A small fraction of this diversity (<5%) was related with spatial structure; however the majority (>50%) was best explained by the exchange of live pigs among countries, pointing to the direct relationship between the movement of hosts and the diversity of their accompanying viruses. Taking TTSuVs as sentinels, this study revealed that the distribution and diversity of comensal microflora in live animals subjected to global trade is shaped by the commercial movements among countries. In the case of TTSuVs, it appears that commercial movements of animals are eroding the genetic composition of the virus populations that may have been present in pig herds since their domestication.     

Evaluation of Soy Protein Concentrate and Meat and Bone Meal as a Replacement for Fish Meal in the Diet of Nile Tilapia Fingerlings

This experiment evaluated soy protein concentrate (SPC) and meat and bone meal as a replacement for fish meal protein (FP) in the diet of Nile tilapia fingerlings. Five diets were evaluated including a control diet (50.0% crude protein [CP], of which half the protein came from fish meal [FM]), and four diets in which FM was replaced by increasing amounts of SPC (25.5, 50.0, 75.5, and 100.0%) in combination with meat and bone meal. At the conclusion of a 60‐d growth trial, the following parameters were determined: final weight (FW), final length (FL), weight gain (WG), feed intake (FI), apparent feed conversion (AFC), survival (SUR), and production cost. The estimate of the best replacement value was determined by polynomial regression and the linear response plateau. The results showed significant (P < 0.05) improvement for WG and AFC ratio as FM was gradually replaced by SPC. The parameters FL and FI reached their optimum value at a replacement level of 100% SPC. These results show that it is feasible to use a combination of SPC and meat and bone meal in a balanced feed formulation as an alternative protein source in the diets of Nile tilapia fingerlings.     

High occurrence of Shiga toxin-producing Escherichia coli (STEC) in healthy cattle in Rio de Janeiro State, Brazil

In order to evaluate the prevalence of Shiga toxin-producing Escherichia coli (STEC) strains, 197 fecal samples of healthy cattle from 10 dairy farms, four beef farms and one slaughterhouse at Rio de Janeiro State, Brazil, were examined for Shiga toxin (Stx) gene sequences by polymerase chain reaction (PCR). For presumptive isolation of O157:H7 E. coli, the Cefixime-potassium tellurite-sorbitol MacConkey Agar (CT-SMAC) was used. A high occurrence (71%) of Stx was detected, and was more frequently found among dairy cattle (82% vs. 53% in beef cattle), in which no differences were observed regarding the age of the animals. Dot blot hybridization with stx1 and stx2 probes revealed that the predominant STEC type was one that had the genes for both stx1 and stx2 in dairy cattle and one that had only the stx1 gene for beef cattle. Three (1.5%) O157:H7 E. coli strains were isolated from one beef and two dairy animals by the use of CT-SMAC. To our knowledge, this is the first report of O157:H7 isolation in Brazil. A PCR-based STEC detection protocol led to the isolation of STEC in 12 of 16 randomly selected PCR-positive stool samples. A total of 15 STEC strains belonging to 11 serotypes were isolated, and most of them (60%) had both stx1 and stx2 gene sequences. Cytotoxicity assays with HeLa and Vero cells revealed that all strains except two of serotype O157:H7 expressed Stx. The data point to the high prevalence of STEC in our environment and suggest the need for good control strategies for the prevention of contamination of animal products.     

Long Chain Fatty Acids of Diet as Factors Influencing Reproduction in Cattle

Cattle are fed moderate amounts of long chain fatty acids (FA) with the objective to enhance lactation and growth; however, recent interest on lipid feeding to cows has focused on reproduction, immunity and health. Increasing the caloric density of the ration by fat feeding has generally improved measures of cow reproduction, but when milk yield and body weight losses were increased by fat supplementation, positive effects on reproduction were not always observed. Feeding fat has influenced reproduction by altering the size of the dominant follicle, hastening the interval to first postpartum ovulation in beef cows, increasing progesterone concentrations during the luteal phase of the oestrous cycle, modulating uterine prostaglandin (PG) synthesis, and improving oocyte and embryo quality and developmental competence. Some of these effects were altered by the type of FA fed. The polyunsaturated FA of the n-6 and n-3 families seem to have the most remarkable effects on reproductive responses of cattle, but it is not completely clear whether these effects are mediated only by them or by other potential intermediates produced during rumen biohydrogenation. Generally, feeding fat sources rich in n-6 FA during late gestation and early lactation enhanced follicle growth, uterine PG secretion, embryo quality and pregnancy in cows. Similarly, feeding n-3 FA during lactation suppressed uterine PG release, and improved embryo quality and maintenance of pregnancy. Future research ought to focus on methods to improve the delivery of specific FA and adequately powered studies should be designed to critically evaluate their effects on establishment and maintenance of pregnancy in cattle.