Temperature‐based targeting in a multispecies fishery under climate change

Temperature controls important physiological processes in fish and determines aspects of their niches. In an effort to inform selective fishing and spatiotemporal management in the U.S. Northeast Multispecies fishery, we used 16 years of data from the Northeast Fisheries Science Center Spring and Fall Scientific Trawl Surveys to determine if bottom temperature can be used to differentiate the distribution of Atlantic cod (Gadus morhua) from other species within the fishery management plan (FMP). We identified two separate regimes in spring temperatures and used empirical cumulative distribution functions to calculate biomass availability by temperature for each species. We applied a bagged approach to find optimum thermal threshold values that maximize the difference in cod biomass from each of the other species. For our study area, 38% to 54% of the species considered were well separated from cod by temperature in spring, whereas only 17% were separable in the fall. This study suggests that temperature targeting can be used seasonally to separate cod from many other species in the FMP including top catches and no‐retention species. The use of temperature targeting may allow fishermen to better meet multiple quotas while avoiding choke species. Our results also suggested increasing thermal overlap between cod and species inhabiting higher median temperatures (e.g., spiny dogfish, Squalus acanthias) under the current warming temperature regime. These results indicate that the ability to selectively fish in the US Northeast Multispecies fishery will become more difficult under a warming ocean.     

Variability of light interception and radiation use efficiency in maize and soybean

Variability of light interception and its derivatives are poorly understood at the field-scale in maize (Zea mays L.) and soybean [Glyine max (L.) Merr.]. Quantifying variability can provide reliable estimates of field-scale processes and reliable methodology. A field study was conducted during the 2005 growing season in a 31 ha maize and 23 ha soybean field rotated annually near Ames, IA to measure variability of cumulatively intercepted photosynthetically active radiation (CI-PAR) and radiation use efficiency (RUE) by deploying eight line quantum sensors in each field. Cumulative mean PAR interception for soybean was 575 MJ m⁻² ending on day of the year (DOY) 249 compared with 687 MJ m⁻² in maize ending on DOY 244. Soybean standard error (s_X) for a single sensor was 4.48% and with six sensors was 1.83% of the final CI-PAR. Maize s_X for a single sensor was 5.29% and with eight sensors was 1.87% of the final CI-PAR. Crop biomass was quantified weekly by collecting four 1 m² samples. Soybean RUE using all sensors was 1.44 ± 0.06 g MJ PAR⁻¹. The highest CI-PAR from a single sensor had RUE of 1.32 and the lowest was 1.55 g MJ PAR⁻¹. Maize RUE using all sensors was 3.35 ± 0.09. The highest CI-PAR from a single sensor had RUE of 2.87 and the lowest was 3.70 g MJ PAR⁻¹. Reliable transmitted PAR and RUE estimates are obtainable at the field-scale in maize and soybean with four and three sensors, respectively, assuming that crop biomass is accurately measured.     

Response of maize (Zea mays) inbreds and hybrids to rimsulfuron

Abstract: Extensive glasshouse studies characterized the varietal response to rimsulfuron of 37 inbreds of maize (Zea mays L.), representing the major inbred families used in hybrid seed production, and 20 defined hybrids from these inbreds. Tolerant hybrids were produced when one or both of its parents were tolerant. Sensitive hybrids occurred only when both parents were sensitive. Genetic analysis indicated that sensitivity is controlled by a single recessive gene. Dose-response analysis showed varieties could vary more than 40000-fold in sensitivity. Only the AHAS-modified variety with the XA-17 gene had changed enzyme sensitivity. This gene provided crop tolerance to very high rates of rimsulfuron and its interaction with an organophosphate insecticide. Breeders can eliminate varietal sensitivity in three ways: always use at least one tolerant hybrid parent, backcross sensitive inbreds with tolerant, or use an AHAS-modified gene.     

A cross-sectional study of the causes of morbidity and mortality in farmed white-tailed deer

Two questionnaires were designed and administered. The first was to a random sample of 340 farmers of white-tailed deer (Odocoileus virginianus) in Canada and the United States. The second was a 10-year retrospective survey of deer submissions to veterinary diagnostic pathology laboratories in Canada and the United States. One-year rates of mortality and common causes of morbidity and mortality for the deer are reported. The primary diagnosis for each record was used to classify diseases into categories, such as parasitic, infectious, toxicological, and neoplastic. Submissions were further classified according to the anatomical location, the pathological change, and the etiology associated with each lesion. Trauma was the most important reported cause of farmed white-tailed deer mortality; necrobacillosis was a major cause of morbidity and mortality, especially in fawns.     

Bile acids in gastric fluids from llamas and alpacas with and without ulcers

To investigate the relationship between duodenogastric reflux and ulceration, gastric fluid was collected from the 1st (n = 26) and 3rd (n = 45) gastric compartments of llamas and alpacas during postmortem examination. Gastric fluids were analyzed for the presence of bile acids. Additionally, the 3rd compartment was examined grossly for the presence of erosions or ulcers, and the intestines were examined for evidence of fluid distention. Detectable bile acids were found in the 3rd compartment fluid of 1 of 28 camelids without ulcers, 7 of 14 camelids with ulcers, and 3 of 3 camelids with intestinal distention. Third compartment bile content was significantly higher in camelids with ulcers (median = 2.9 micromol/L) or intestinal distention (median = 371.5 micromol/L) than those with neither (median = 0 micromol/L). Bile acids were detected in the 1st gastric compartment in only 2 camelids. These findings suggest a reflux of duodenal contents, including bile acids, into the 3rd compartment in camelids with ulcers, similar to what is seen in camelids with poor intestinal emptying. Whether bile reflux was the cause of the ulcers or occurred after or concurrent to their development remains unknown.     

Keratinizing ameloblastoma in a 9-month-old llama (Lama glama).

A 9-month-old male llama (Lama glama) was presented because of a rapidly growing mass on the right side of the face. Radiographs revealed a marked expansion of the right caudal face region with bone lysis involving the maxilla and the nasal, lacrimal, zygomatic, and palatine bones. Cytologically, the mass consisted of atypical round to polygonal cells with round nuclei and basophilic cytoplasms that formed acini and rows. Histologically, the mass consisted of anastomosing cords and sheets of neoplastic odontogenic epithelial cells embedded in a loose fibrovascular connective tissue. Single layers of peripheral, polarized, palisading, columnar epithelial cells were seen at the edges of some cords. Within the centers of the cords, epithelial cells showed rapid progression to keratin production. The histologic diagnosis was keratinizing ameloblastoma. Ameloblastomas are neoplasms of odontogenic epithelium that tend to be locally aggressive and can cause substantial destruction of bony structures. Because ameloblastomas do not tend to metastasize, they can be successfully treated by complete surgical excision, performed before extensive bony destruction occurs. Ameloblastoma, although expected to be rare, should be onthe list of differential diagnoses for facial swelling in llamas.     

Successional change in the insect community of a fragmented landscape

Habitat fragmentation strongly affects insect species diversity and community composition, but few studies have examined landscape effects on long term development of insect communities. As mobile consumers, insects should be sensitive to both local plant community and landscape context. We tested this prediction using sweep-net transects to sample insect communities for 8 years at an experimentally fragmented old-field site in northeastern Kansas, USA. The site included habitat patches undergoing secondary succession, surrounded by a low turf matrix. During the first 5 years, plant richness and cover were measured in patches. Insect species richness, total density, and trophic diversity increased over time on all transects. Cover of woody plants and perennial forbs increased each year, adding structural complexity to successional patches and potentially contributing to increased insect diversity. Within years, insect richness was significantly greater on transects through large successional patches (5000 m²) than on transects through fragmented arrays of 6 medium-sized (total area 1728 m²) or 15 small (480 m²) patches. However, plant cover did not differ among patch types and was uncorrelated with insect richness within years. Insect richness was strongly correlated with insect density, but trophic and α diversities did not differ among patch types, indicating that patch insect communities were subsets of a common species pool. We argue that differences in insect richness resulted from landscape effects on the size of these subsets, not patch succession rates. Greater insect richness on large patches can be explained as a community-level consequence of population responses to resource concentration.