Effects of landscape urbanization on magpie occupancy dynamics in France

Responses of species to landscape modifications are generally documented through their distribution at a given time along an intensity gradient of land transformation. By focusing on patterns, we are limited to infer ecological processes occurring within a system and its response to environmental disturbances which can further change over time. Using diachronic datasets at the scale of France, we analyzed the spatial responses of the black-billed magpie, which has recently colonized cities, to landscape urbanization. This study applied recently developed statistical approaches incorporating detection uncertainty of the magpie, based on the capture-recapture statistical framework. We tested whether, and how, extinction and colonization mechanisms influenced variations of magpie occupancy from 2001 to 2005. In addition, we assessed the importance of the recent urbanization of the French countryside in determining population dynamics. Overall, our analysis proved that the proportion of urban areas and recent urbanization in France led to an increase in the probability of magpie occupancy. Unexpectedly, the species is concomitantly disappearing from the countryside, leading to a rapid change in the distribution of the species. This study stressed the importance of incorporating detection uncertainty in inference process about spatial dynamics. Overall, we show how useful it is to account for the dynamic evolution of the landscape in ecological studies.     

Early degradation of plant alkanes in soils: A litterbag experiment using C-labelled leaves

We monitored the carbon isotope composition of bulk leaves and specific long-chain alkanes during a four-year litterbag experiment using ¹³C-labelled leaves and unlabelled reference leaves of the European beech tree (Fagus sylvatica L.). Whereas the isotope composition of alkanes from ¹³C-enriched leaves exhibited a marked decrease in ¹³C-content, the isotope composition of unlabelled reference leaves remained nearly constant. We interpreted this difference as evidence for a microbial contribution to the long-chain alkane pool of the decomposing leaves and related it to the progressive invasion of leaves by soil organisms which was revealed upon microscopic examination. These results suggest that long-chain alkanes may not provide an unaltered record of organic carbon isotope composition in soils and sediments.     

Application of denaturing high-performance liquid chromatography (DHPLC) for the identification of fish: a new way to determine the composition of processed food containing multiple species

The identification of fish species in transformed food products is difficult because the existing methods are not adapted to heat-processed products containing more than one species. Using a common to all vertebrates region of the cytochrome b gene, we have developed a denaturing high-performance liquid chromatography (DHPLC) fingerprinting method, which allowed us to identify most of the species in commercial crab sticks. Whole fish and fillets were used for the creation of a library of referent DHPLC profiles. Crab sticks generated complex DHPLC profiles in which the number of contained fish species can be estimated by the number of major fluorescence peaks. The identity of some of the species was predicted by comparison of the peaks with the referent profiles, and others were identified after collection of the peak fractions, reamplification, and sequencing. DHPLC appears to be a quick and efficient method to analyze the species composition of complex heat-processed fish products.     

Effects of dietary boron and phytase supplementation on growth performance and mineral profile of broiler chickens fed on diets adequate or deficient in calcium and phosphorus

1. Two experiments were designed to determine the effect of dietary boron (B) in broiler chickens. In Experiment 1, a 2 × 4 factorial arrangement of treatments was used to investigate the effect of dietary calcium (Ca) and available phosphorus (aP) (adequate or deficient) and supplemental B (0, 20, 40, and 60 mg/kg diet). In Experiment 2, B, at 20 mg/kg, and phytase (PHY) (500 FTU/kg diet) were incorporated into a basal diet deficient in Ca and aP, either alone or in combination.

2. The parameters that were measured were growth performance indices, serum biochemical activity as well as ash and mineral (i.e. Ca, P, Mg, Fe, Cu and Zn) content of tibia, breast muscle and liver.

3. Results indicated that both supplemental B and dietary Ca and aP had marginal effects on performance indices of chickens grown for 42 d.

4. There were positive correlations (linear effect) between B concentrations of serum, bone, breast muscle and liver and the amount of B consumed.

5. Serum T₃ and T₄ activities increased linearly with higher B supplementation.

6. Increasing supplemental B had significant implications on breast muscle and liver mineral composition. Lowering dietary Ca and aP level increased Cu content in liver and both Fe and Zn retention in breast muscle. Tibia ash content and mineral composition did not respond to dietary modifications with either Ca–aP or B.

7. The results also suggested that dietary contents of Ca and aP do not affect the response to B regarding tissue mineral profile. Dietary combination with B and PHY did not create a synergism with regard to growth performance and bioavailability of the minerals.     

Reproductive social behavior: cooperative games to replace sexual selection

Theories about sexual selection can be traced back to Darwin in 1871. He proposed that males fertilize as many females as possible with inexpensive sperm, whereas females, with a limited supply of large eggs, select the genetically highest quality males to endow their offspring with superior capabilities. Since its proposal, problems with this narrative have continued to accumulate, and it is our view that sexual selection theory needs to be replaced. We suggest an approach that relies on the exchange of direct ecological benefits among cooperating animals without reference to genetic benefits. This approach can be expressed mathematically in a branch of game theory that pertains to bargaining and side payments.     

Effects of different variable sets on the potential distribution of fish species in the Amazon Basin

Estimating species’ potential distribution is one of the main objectives of macroecology, especially when sampling biases can affect knowledge on how environmental variables affect species distribution. Ecological niche models estimate species’ environmental niches from different variables and their occurrences. Using the presence-only data from eight Amazonian fish species, which inhabit rivers and streams, we aimed to (a) explore the effect of different sets variables on the spatial distributions of target species and (b) evaluate the predictive responses of MaxEnt to sets of variables with different degrees of complexity. MaxEnt has high flexibility in relation to the input data and its performance is influenced by a moderate number of adjustable parameters, allowing for high precision results when balancing underestimation and overestimation errors. We used environmental predictors in MaxEnt the principal components of climatic, topographic and edaphic variables as inputs. The combination of topographic and edaphic variables produced more precise and spatially restricted distribution ranges for all species when compared to those generated with climatic variables. All models reached high AUC values, especially for stream species. Modelled range sizes were broader for the river species, suggesting different tolerance thresholds and habitat preferences when compared to stream species. The complexity of the different variables sets did not affect MaxEnt's prediction capacity. However, for stream species, MaxEnt showed a greater predictive power. This work increases the knowledge with regards to the influence of different environmental predictors on the spatial patterns of the distribution of Amazonian fish.     

Threshold and weighted-distance methods: a combined multiscale approach improves explanatory power of forest carabid beetle abundance in agricultural landscape

Landscape Ecology - To analyze the scales at which landscape structure influences ecological processes, two approaches with different underlying ecological assumptions exist; the usual threshold...