Expression of vascular endothelial growth factor in canine oral malignant melanoma

Serum, plasma and tissue expression of vascular endothelial growth factor (VEGF) was measured in 20 dogs previously diagnosed histologically with oral melanoma. The concentrations of VEGF in serum and plasma were significantly higher in dogs with melanoma than in a control population (P ≤ 0.002). Concentrations of VEGF in the serum and plasma of dogs with melanoma were highly correlated (r = 0.867). Ninety‐five per cent of melanoma tissues expressed VEGF. Two staining patterns were detected: diffuse and granular cytoplasmic staining. High blood concentrations of VEGF were correlated to a shorter survival time in dogs receiving definitive therapy (P = 0.002). Survival times were significantly longer in dogs receiving definitive therapy versus palliative therapy (median 496 versus 97 days, P = 0.007). Blood concentrations of VEGF were associated with stage (P < 0.05). Dogs with oral melanoma have increased serum, plasma and tissue concentrations of VEGF. Increased expression of VEGF may be a reasonable target for future therapy of canine oral melanoma.     

Biochemical responses to ultraviolet‐C radiation and methyl jasmonate in Pinus radiata seedlings that accompany induced resistance to Diplodia pinea

Irradiation of Pinus radiata seedlings with ultraviolet‐C (UV‐C) radiation or spray application of methyl jasmonate (MeJA) each resulted in induced resistance to subsequent wound inoculation with Diplodia pinea. Induced resistance was expressed by lower incidence of disease and by reduced size of stem lesions than in untreated seedlings. UV‐C was more effective than MeJA and the induced resistance was greatest in seedlings that were irradiated with UV‐C for 60 min, 1 week before pathogen inoculation. Induced resistance in the UV‐C treated stems was concomitant with increases in peroxidase (POX) and polyphenol oxidase (PPO) activity but showed no correlation with concentrations of α‐pinene and β‐pinene or total phenolics. Furthermore, POX induction in stem tissue was cumulative and was greatest after three repeat treatments with UV‐C at 6, 3 and 1 week before inoculation. In contrast to UV‐C, MeJA induced a significant increase in β‐pinene concentration in stem tissue but did not affect PPO activity. POX activity was induced by MeJA in stems, although to a lesser extent than by UV‐C, but was not affected in needles. This appears to be the first report demonstrating the use of UV‐C radiation to induce resistance to fungal infection in a coniferous species. The implications of the underlying differences between UV‐C‐ and MeJA‐mediated resistance to D. pinea are discussed.     

Puccinia psidii in Queensland,Australia: disease symptoms,distribution and impact

Puccinia psidii has long been considered a significant threat to Australian plant industries and ecosystems. In April 2010, P. psidii was detected for the first time in Australia on the central coast of New South Wales (NSW). The fungus spread rapidly along the east coast and in December 2010 was found in Queensland (Qld) followed by Victoria a year later. Puccinia psidii was initially restricted to the southeastern part of Qld but spread as far north as Mossman. In Qld, 48 species of Myrtaceae are considered highly or extremely susceptible to the disease. The impact of P. psidii on individual trees and shrubs has ranged from minor leaf spots, foliage, stem and branch dieback to reduced fecundity. Tree death, as a result of repeated infection, has been recorded for Rhodomyrtus psidioides. Rust infection has also been recorded on flower buds, flowers and fruits of 28 host species. Morphological and molecular characteristics were used to confirm the identification of P. psidii from a range of Myrtaceae in Qld and compared with isolates from NSW and overseas. A reconstructed phylogeny based on the LSU and SSU regions of rDNA did not resolve the familial placement of P. psidii, but indicated that it does not belong to the Pucciniaceae. Uredo rangelii was found to be con‐specific with all isolates of P. psidii in morphology, ITS and LSU sequence data, and host range.     

Genotypic diversity and migration of clonal lineages of Botrytis cinerea from chickpea fields of Bangladesh inferred by microsatellite markers

An analysis of allelic diversity at nine microsatellite loci provided an insight into the population structure of Botrytis cinerea from four fields (sampled in 2003 and 2004) that represented important regional locations for chickpea production in Bangladesh. Although three populations were limited by sample size after clone‐correction, a total of 51 alleles were amplified among 146 B. cinerea isolates from Bangladesh, which revealed a high amount of within‐population and overall genetic diversity (H_S = 0·48 and H_T = 0·54, respectively). The percentage of maximal genotypic diversity (G) ranged between populations (G = 23–40), with a total of 69 haplotypes detected (G = 25). Bayesian cluster analysis depicted two major clusters distributed among the four Bangladesh populations, indicating population admixture from two origins that have spread throughout these regions. Genotype flow between regions was detected and indicated the spread of clonal lineages, consistent with relatively low differentiation among the four populations (mean G_ST = 0·1, P < 0·05). These results highlighted the potential threat of host resistance breakdown as a result of considerable genetic diversity, genotype flow and the evolutionary potential of B. cinerea.     

Survival and Growth of Isolated Polyps of Galaxea fascicularis (Linnaeus 1767) on Six Kinds of Culture Substrates: Implications for Mariculture,Aquarium Culture,and Conservation

Coral aquaculture is viewed as a sustainable method of providing colonies for use in the aquarium trade, pharmacological studies, and coral reef rehabilitation. The production of large, healthy specimens depends on providing conditions that mimic or surpass natural reef environments. Materials with a high degree of variability in physical and chemical properties are utilized as substrates in coral aquaculture, but until fragment–substrate interactions are isolated and independently studied, the possible inhibitory and facilitative effects of each material will remain unclear. To understand potential key roles that substrates can play in coral culture, a comparison was made about the role of various materials on fragment survival and growth. The experiment examined the interactions between isolates of a common scleractinian coral, Galaxea fascicularis, and six commonly used substrates (coral rock, terracotta, polyvinyl chloride, steel, rubber tire, and concrete) and how these affected survival and growth. No differences were observed in the survival, colony size, and polyp production of the resulting microcolonies. The results show that, for G. fascicularis, growth is not affected by substrate type. The results demonstrate the use of a wide variety of materials for the successful aquaculture of scleractinian corals.     

Evolution of supergene families associated with insecticide resistance

The emergence of insecticide resistance in the mosquito poses a serious threat to the efficacy of many malaria control programs. We have searched the Anopheles gambiae genome for members of the three major enzyme families- the carboxylesterases, glutathione transferases, and cytochrome P450s-that are primarily responsible for metabolic resistance to insecticides. A comparative genomic analysis with Drosophila melanogaster reveals that a considerable expansion of these supergene families has occurred in the mosquito. Low gene orthology and little chromosomal synteny paradoxically contrast the easily identified orthologous groups of genes presumably seeded by common ancestors. In A. gambiae, the independent expansion of paralogous genes is mainly a consequence of the formation of clusters among locally duplicated genes. These expansions may reflect the functional diversification of supergene families consistent with major differences in the life history and ecology of these organisms. These data provide a basis for identifying the resistance-associated enzymes within these families. This will enable the resistance status of mosquitoes, flies, and possibly other holometabolous insects to be monitored. The analyses also provide the means for identifying previously unknown molecules involved in fundamental biological processes such as development.     

Diversity considerations in HIV-1 vaccine selection

Globally, human immunodeficiency virus-type 1 (HIV-1) is extraordinarily variable, and this diversity poses a major obstacle to AIDS vaccine development. Currently, candidate vaccines are derived from isolates, with the hope that they will be sufficiently cross-reactive to protect against circulating viruses. This may be overly optimistic, however, given that HIV-1 envelope proteins can differ in more than 30% of their amino acids. To contend with the diversity, country-specific vaccines are being considered, but evolutionary relationships may be more useful than regional considerations. Consensus or ancestor sequences could be used in vaccine design to minimize the genetic differences between vaccine strains and contemporary isolates, effectively reducing the extent of diversity by half.     

Ostwald ripening of clays and metamorphic minerals

Analyses of particle size distributions indicate that clay minerals and other diagenetic and metamorphic minerals commonly undergo recrystallization by Ostwald ripening. The shapes of their particle size distributions can yield the rate law for this process. One consequence of Ostwald ripening is that a record of the recrystallization process is preserved in the various particle sizes. Therefore, one can determine the detailed geologic history of clays and other recrystallized minerals by separating, from a single sample, the various particle sizes for independent chemical, structural, and isotopic analyses.     

Effects of fish and plankton and lake temperature and mixing depth

A comparative study of small temperate lakes (<20 square kilometers) indicates that the mixing depth or epilimnion is directly related to light penetration measured as Secchi depth. Clearer lakes have deeper mixing depths. This relation is the result of greater penetration of incident solar radiation in lakes and enclosures with high water clarity. Data show that light penetration is largely a function of size distribution and biomass of algae as indicated by a relation between the index of plankton size distribution (slope) and Secchi depth. Larger or steeper slopes (indicative of communities dominated by small plankton) are associated with shallower Secchi depth. In lakes with high abundances of planktivorous fish, water clarity or light penetration is reduced because large zooplankton, which feed on small algae, are reduced by fish predation. The net effect is a shallower mixing depth, lower metalimnetic temperature and lower heat content in the water column. Consequently, the biomass and size distribution of plankton can change the thermal structure and heat content of small lakes by modifying light penetration.     

Characterisation of genes isolated from a potato swellingstolon cDNA library

Summary In screening to isolate a full-length copy of a previously isolated cDNA clone, a further three cDNAs were also isolated from a library prepared from sub-apical swelling-stolon tissue of potato (Solanum tuberosum L.). Sequence analysis showed these clones to be similar to extensin-like protein genes, acyl carrier protein thioesterase genes and high mobility group protein genes, respectively. A further cDNA, isolated by subtractive hybridisation, was similar to a tomato cDNA previously isolated on the basis of its down-regulation following nematode infection. While all the newly isolated genes were expressed in swelling stolons, for most, maximal expression was seen to be in stem tissue. Possible roles for these genes in the development of potato plants are discussed, as is the significance of gene expression in stems and stolons to the process of tuberisation.