Cross-species identification of Mendel's I locus

A key gene involved in plant senescence, mutations of which partially disable chlorophyll catabolism and confer stay-green leaf and cotyledon phenotypes, has been identified in Pisum sativum, Arabidopsis thaliana, and Festuca pratensis by using classical and molecular genetics and comparative genomics. A stay-green locus in F. pratensis is syntenically equivalent to a similar stay-green locus on rice chromosome 9. Functional testing in Arabidopsis of a homolog of the rice candidate gene revealed (i) senescence-associated gene expression and (ii) a stay-green phenotype after RNA interference silencing. Genetic mapping in pea demonstrated cosegregation with the yellow/green cotyledon polymorphism (I/i) first reported by Gregor Mendel in 1866.     

Multielemental fingerprinting as a tool for authentication of organic wheat, barley, faba bean, and potato

The multielemental composition of organic and conventional winter wheat, spring barley, faba bean, and potato was analyzed with inductively coupled plasma-optical emission spectrometry (ICP-OES) and -mass spectrometry (ICP-MS). The crops were cultivated in two years at three geographically different field locations, each accommodating one conventional and two organic cropping systems. The conventional system produced the highest harvest yields for all crops except the nitrogen-fixing faba bean, whereas the dry matter content of each crop was similar across systems. No systematic differences between organic and conventional crops were found in the content of essential plant nutrients when statistically analyzed individually. However, chemometric analysis of multielemental fingerprints comprising up to 14 elements allowed discrimination. The discrimination power was further enhanced by analysis of up to 25 elements derived from semiquantitative ICP-MS. It is concluded that multielemental fingerprinting with semiquantitative ICP-MS and chemometrics has the potential to enable authentication of organic crops.     

Spatial α-diversity patterns of diverse insect taxa in Northern China: Lessons for biodiversity conservation

Current approaches in terrestrial biodiversity conservation focus predominantly on plants and vertebrates. While these groups account for less than 4% of the estimated global species richness, it is commonly argued that especially the species richness in higher plants is a suitable indicator of overall biodiversity. We tested this assumption, investigating species richness and equitability patterns in three highly species-rich insect families and their links with the vegetation and other environmental factors. Vegetation surveys were combined with pitfall and light trapping to establish the α-diversity of ground beetles, geometrid moths and arctiid moths on 48 plots at varying altitudes between Beijing and the Inner Mongolian Plateau. Soil pH and nutrient status were also recorded. The α-diversity patterns in the three insect families were non-congruent, and links with phytodiversity were weak. The spatial α-diversity patterns in each of the three insect families were significantly correlated with the species density of individual plant families. These links varied between the three insect taxa and were mostly negative in moths. Furthermore, geometrid moth diversity decreased with increasing elevation and decreasing soil pH. Strongly diverging α-diversity patterns across different insect taxa illustrate that it is impossible to find a simple surrogate representing cross-taxon diversity for these highly diverse groups. Furthermore, phytodiversity and vegetation composition appear to play a limited role in governing insect diversity patterns. These results underline the significant risk that current plant-focused approaches in terrestrial biodiversity conservation are inadequate in addressing the conservation needs of the vast majority of species on earth.     

The toxicity of selected acaricides against five stored product mites under laboratory assay

In laboratory tests, the toxicity of acaricides targeted against house dust mites was tested on five species of stored product mites (Acarus siro, Aleuroglyphus ovatus, Carpoglyphus lactis, Lepidoglyphus destructor, and Tyroborus lini). The formulations of benzyl-benzoate, benzyl-benzoate/permethrin/pyriproxyfen, and neem were diluted in water and applied to filter paper in an unventilated chamber. The mortality of mites was observed after 24 h of exposure to acaricide-impregnated filter paper. All of the tested acaricides were toxic to all of the mite species. There were significant differences in mortality among the species and the acaricides. Benzyl-benzoate/permethrin/pyriproxyfen was the most effective, followed by benzyl-benzoate and neem. L. destructor (LD₅₀ 0.01–0.11 μg) was the most sensitive mite species, followed by A. siro (LD₅₀ 0.04–0.12 μg), T. lini (LD₅₀ 2–21 μg), A. ovatus (LD₅₀ 3–18 μg), and C. lactis (LD₅₀ 4–64 μg). Based on the highly toxic effects of the tested acaricides against the stored product mites, the acaricides should be considered as a potential tool in the control of stored product mites, although next screening is necessary.     

The effects of chronic intermittent noise exposure on broiler chicken performance

Effects of different noise levels (70 or 80 dB) that broilers were exposed to during the entire fattening period and also the effect of the timing of the first exposure to intermittent noise in the course of fattening (day 1 vs. day 7) were monitored. After 7 days of exposure to intermittent noise, experimental chickens already showed a significant decrease in live body weight in comparison with the control group. The difference between the group exposed to intermittent noise at 70 dB and the group exposed to 80 dB levels was not statistically significant, although the mean live body weight of broilers in the latter was lower during the entire fattening period. The chickens exposed to intermittent noise from day 1 of age showed lower mean live weight throughout the fattening period compared to chickens exposed to the same level of intermittent noise only from day 7 of age, although at the end of fattening the difference was statistically significant only in chickens exposed to the higher level of intermittent noise (80 dB).     

A clinical study on the effect in horses during medetomidine-isoflurane anaesthesia, of butorphanol constant rate infusion on isoflurane requirements, on cardiopulmonary function and on recovery characteristics

ObjectiveTo test if the addition of butorphanol by constant rate infusion (CRI) to medetomidine–isoflurane anaesthesia reduced isoflurane requirements, and influenced cardiopulmonary function and/or recovery characteristics.Study designProspective blinded randomised clinical trial.Animals61 horses undergoing elective surgery.MethodsHorses were sedated with intravenous (IV) medetomidine (7 μg kg^?1); anaesthesia was induced with IV ketamine (2.2 mg kg^?1) and diazepam (0.02 mg kg^?1) and maintained with isoflurane and a CRI of medetomidine (3.5 μg kg^?1 hour^?1). Group MB (n = 31) received butorphanol CRI (25 μg kg^?1 IV bolus then 25 μg kg^?1 hour^?1); Group M (n = 30) an equal volume of saline. Artificial ventilation maintained end-tidal CO₂ in the normal range. Horses received lactated Ringer’s solution 5 mL kg^?1 hour^?1, dobutamine <1.25 μg kg^?1 minute^?1 and colloids if required. Inspired and exhaled gases, heart rate and mean arterial blood pressure (MAP) were monitored continuously; pH and arterial blood gases were measured every 30 minutes. Recovery was timed and scored. Data were analyzed using two way repeated measures anova, independent t-tests or Mann–Whitney Rank Sum test (p < 0.05).ResultsThere was no difference between groups with respect to anaesthesia duration, end-tidal isoflurane (MB: mean 1.06 ± SD 0.11, M: 1.05 ± 0.1%), MAP (MB: 88 ± 9, M: 87 ± 7 mmHg), heart rate (MB: 33 ± 6, M: 35 ± 8 beats minute^?1), pH, PaO₂ (MB: 19.2 ± 6.6, M: 18.2 ± 6.6 kPa) or PaCO_2. Recovery times and quality did not differ between groups, but the time to extubation was significantly longer in group MB (26.9 ± 10.9 minutes) than in group M (20.4 ± 9.4 minutes).Conclusion and clinical relevanceButorphanol CRI at the dose used does not decrease isoflurane requirements in horses anaesthetised with medetomidine–isoflurane and has no influence on cardiopulmonary function or recovery.     

Blood parameters in Swedish dairy herds with high or low incidence of displaced abomasum or ketosis

Sixty dairy herds were studied to investigate the association between long-term incidence of displaced abomasum and clinical ketosis and body condition score and blood profiles, including parameters estimating energy metabolism and hepatic lipidosis in the periparturient period and early lactation. Blood samples were taken around parturition and in early lactation from cows without apparent clinical symptoms of metabolic disorders. A difference in metabolism between high and low incidence herds was shown post-partum by a lower metabolic index (the revised Quantitative Insulin Sensitivity Check Index, RQUICKI), and tendencies for higher concentrations of glucose, insulin and non-esterified fatty acids in the high incidence herds. High incidence herds had more cows and produced on average 1400kg energy-corrected milk per cow per year more than the low incidence herds. No differences were found in parameters reflecting liver cell damage. In the first 3weeks post-partum the RQUICKI was a more sensitive marker of herds with a high incidence of displaced abomasum and clinical ketosis than any of the individual parameters, but further research is needed before practical applications of the RQUICKI can be foreseen.     

Temporal distribution and pathogenicity of the predominant tomato‐infecting begomoviruses in Taiwan

Between 1998 and 2009, the four tomato‐infecting begomovirus species detected in Taiwan were Ageratum yellow vein Hualien virus (AYVHuV), Tomato leaf curl Taiwan virus (ToLCTWV), Tomato yellow leaf curl Thailand virus (TYLCTHV) and a newly defined species Tomato leaf curl Hsinchu virus (ToLCHsV). AYVHuV was detected occasionally in 2003 and ToLCHsV only in 2000–2001, whilst ToLCTWV was detected throughout the period. TYLCTHV was first detected in 2005. Between 1998 and 2005, >99% of the begomovirus‐positive samples were infected with ToLCTWV. In 2007 in western Taiwan, 16% of the positive samples were infected with ToLCTWV, 35% with TYLCTHV and 49% with mixed infection (ToLCTWV/TYLCTHV). In contrast, in eastern Taiwan the proportions were 84% ToLCTWV, 2% TYLCTHV and 14% mixed infection. However, throughout Taiwan in 2008–2009, most positive samples were either identified as TYLCTHV (51%) or mixed infection (ToLCTWV/TYLCTHV; 41%), and only 8% were ToLCTWV. This shows a clear trend of shifting from ToLCTWV to TYLCTHV and mixed infection over a short time period in Taiwan. Sequence analyses indicated that tomato‐infecting AYVHuV, an apparent recombinant between ToLCTWV and AYVHuV from Ageratum, represents a new strain Hsinchu. TYLCTHV Taiwan isolates were highly similar to each other, whereas ToLCTWV isolates had greater diversity and were classified into three strains which had one country‐wide and two local distributions. ToLCTWV and TYLCTHV were confirmed as monopartite and bipartite begomoviruses, respectively, by agroinfection followed by transmission with Bemisia tabaci biotype B. In addition, TYLCTHV was found to be mechanically transmissible together with viral DNA‐B.     

Effect of pesticide fate parameters and their uncertainty on the selection of 'worst-case' scenarios of pesticide leaching to groundwater

BACKGROUND: For the registration of pesticides in the European Union, model simulations for worst‐case scenarios are used to demonstrate that leaching concentrations to groundwater do not exceed a critical threshold. A worst‐case scenario is a combination of soil and climate properties for which predicted leaching concentrations are higher than a certain percentile of the spatial concentration distribution within a region. The derivation of scenarios is complicated by uncertainty about soil and pesticide fate parameters. As the ranking of climate and soil property combinations according to predicted leaching concentrations is different for different pesticides, the worst‐case scenario for one pesticide may misrepresent the worst case for another pesticide, which leads to ‘scenario uncertainty’. RESULTS: Pesticide fate parameter uncertainty led to higher concentrations in the higher percentiles of spatial concentration distributions, especially for distributions in smaller and more homogeneous regions. The effect of pesticide fate parameter uncertainty on the spatial concentration distribution was small when compared with the uncertainty of local concentration predictions and with the scenario uncertainty. CONCLUSION: Uncertainty in pesticide fate parameters and scenario uncertainty can be accounted for using higher percentiles of spatial concentration distributions and considering a range of pesticides for the scenario selection. Copyright © 2010 Society of Chemical Industry     

Effect of improved fallow on crop productivity, soil fertility and climate-forcing gas emissions in semi-arid conditions

The impacts of fallow on soil fertility, crop production and climate-forcing gas emissions were determined in two contrasting legumes, Gliricidia sepium and Acacia colei, in comparison with traditional unamended fallow and continuous cultivation systems. After 2 years, the amount of foliar material produced did not differ between the two improved fallow species; however, grain yield was significantly elevated by 55% in the first and second cropping season after G. sepium compared with traditional fallow. By contrast, relative to the unamended fallow, a drop in grain yield was observed in the first cropping season after A. colei, followed by no improvement in the second. G. sepium had higher foliar N, K and Mg, while A. colei had lower foliar N but higher lignin and polyphenols. In the third year after fallow improvement, a simulated rainfall experiment was performed on soils to compare efflux of N₂O and CO₂. Improved fallow effects on soil nutrient composition and microbial activity were demonstrated through elevated N₂O and CO₂ efflux from soils in G. sepium fallows compared with other treatments. N₂O emissions were around six times higher from this nitrogen-fixing soil treatment, evolving 69.9 ngN₂O–N g⁻¹soil h⁻¹ after a simulated rainfall event, compared with only 8.5 and 4.8 ngN₂O–N g⁻¹soil h⁻¹ from soil under traditional fallow and continuous cultivation, respectively. The findings indicate that selection of improved fallows for short-term fertility enhancement has implications for regional N₂O emissions for dry land regions.