Fish condition as an indicator of stock status: Insights from condition index in a food-limiting environment

Individual performance defines population dynamics. Condition index – a ratio of weight and some function of length – has been louded as an indicator of individual performance and recommended as a tool in fisheries management and conservation. However, insufficient understanding of the correlation between individual-level processes and population-level responses hinders its adoption. To this end, we use composite modelling to link individual's condition, expressed through the condition index, to population-level status. We start by modelling ontogeny of European pilchard (Sardina pilchardus, Clupeidae) as a function of food and constant temperature using Dynamic Energy Budget theory. We then provide a framework to simultaneously track the individual- and population-level statistics by incorporating the dynamic energy budget model into an individual-based model. Lastly, we explore the effects of fishing pressure on the statistics in two constant and food-limited environmental carrying capacity scenarios. Results show that, regardless of the species' environmental carrying capacity, individual condition index will increase with fishing mortality, that is, with reduction of stock size. Same patterns are observed for gilthead seabream (Sparus aurata, Sparidae), a significantly different species. Condition index can, therefore, in food-limited populations, be used to (i) estimate population size relative to carrying capacity and (ii) distinguish overfished from underfished populations. Our findings promote a practical way to operationally incorporate the condition index into fisheries management and marine conservation, thus providing additional use for the commonly collected biometric data. Some real-world applications, however, may require additional research to account for other variables such as fluctuating environmental conditions and individual variability.     

Mycobacteria in aquarium fish: results of a 3‐year survey indicate caution required in handling pet‐shop fish

Fish are commonly infected with non‐tuberculous mycobacteria (NTM), which should be regarded as potential pathogens when handling aquarium fish and equipment. This study examined 107 aquarium fish from pet shops. Cultivation of the fish samples using different selective media was conducted for identification of NTM. Isolates were identified using the GenoType Mycobacterium common mycobacteria and additional species assays, sequencing of the 16S rRNA and rpoB genes, and real‐time PCR assay for identification of Mycobacterium (M.) marinum. Among the investigated fish, 79.4% (85/107) were positive for mycobacteria, with 8.2% (7 of 85) having two mycobacterial species present. Among the positive fish, the common pathogens M. marinum, Mycobacterium fortuitum (M. fortuitum group) and Mycobacterium chelonae were identified in approx. 90% of fish and other NTM species in 10%, including Mycobacterium peregrinum/septicum, Mycobacterium gordonae, Mycobacterium arupense, Mycobacterium kansasii, Mycobacterium ulcerans and Mycobacterium setense. The well‐known human pathogen M. marinum was present in 10.6% of the positive fish (9 of 85). The species of mycobacteria identified in the study are not only recognized as aquarium fish pathogens, but can also cause pathology in humans. Microbiological and clinical communities should therefore be sensitized to the role of NTM in infections associated with exposure to aquarium fish.     

Growth and morphology of an endangered native freshwater fish,crucian carp Carassius carassius,in an English ornamental pond

• 1. Crucian carp Carassius carassius, which is native to south‐east England, has received little previous study in Britain but is threatened by introductions of goldfish Carassius auratus through hybridization and by frequent mis‐identification of brown goldfish as crucian carp. The present study provides the first data on back‐calculated growth, morphology and age‐at‐maturity of crucian carp in Britain.
• 2. The youngest mature crucian were female (age 2+), the smallest mature crucian were male (age 3+), with almost all fish mature at age 3+. Sex dimorphism in back‐calculated standard length at age was not observed except at age 2+ (juveniles longest). Shifts in morphological characters often associated with maturation (dorsal and ventral fin length, dorsal and anal fin depth, pre‐dorsal distance, body width) were observed between ages 4+ and 7+, which (in contrast to the relatively abrupt shift in maturity) suggests that age and size at maturation may not reflect the size and age of active (i.e. real) spawning.
• 3. Back‐calculated standard lengths at age for crucian carp were intermediate relative to other European populations, indicating that environmental conditions in England appear to be well suited to the species despite being at the westernmost extent of the species' native European range. The management of ornamental ponds specifically for crucian carp is discussed.

© Crown copyright 2007. Reproduced with the permission of Her Majesty's Stationery Office. Published by John Wiley & Sons, Ltd.     

Phylogenetic analysis of intestinal bacteria of freshwater salmon Salmo salar and sea trout Salmo trutta trutta and diet

The microbial diversity of culturable intestinal microflora of wild freshwater salmonid fishes salmon Salmo salar and sea trout Salmo trutta trutta juveniles (0+ years old) from the same environmental conditions were investigated by means of molecular identification techniques and analysis of diet. Significant differences in the intestinal microbial diversity were observed in different fish species. The predominant group in the intestinal tract of the salmon comprised representatives of the Enterobacteriaceae family (23%), Plesiomonas (19.2%) and Carnobacterium (15.3%). Predominant microbiota in sea trout intestinal tract were Enterobacteriaceae (52%), Aeromonas (22%) and Pseudomonas (14%). The results show that Enterobacteriaceae were predominant in the intestinal tract of the salmon and the sea trout juveniles raised on diets of different compositions. However, molecular identification of the intestinal microbiota at the species or genus level revealed differences in these fish species. Bacteria in the hindgut of salmon included Pragia and Serratia. However, bacteria in the gut contents of sea trout from the Enterobacteriaceae family were Buttiauxella, Enterobacter, Moellerella, Pantoea, Rahnella and Tiedjeia arctica. A novel phylotype of T. arctica is harbored in the intestinal tract of wild salmon, and may correspond to a previously undescribed species.     

A survey on Tetracapsuloides bryosalmonae infections in Slovene fresh waters

Slovenia has no history of health problems related to proliferative kidney disease (PKD) either in farmed or in wild fish. However, due to the past molecular evidence for the presence of Tetracapsuloides bryosalmonae DNA in tissues of some fish from open waters, a survey was conducted on wild salmonids that were primarily sampled for other purposes. In winter 2010–2011, specimens from a total of 244 rainbow trout, Oncorhynchus mykiss (Walbaum), and brown trout, Salmo trutta L., from 30 bodies of fresh water were examined for T. bryosalmonae using a PCR method. The sampled fish showed no clinical signs or gross pathological lesions characteristic of PKD. Nineteen (7.8%) fish from seven (23.3%) fresh waters were positive for T. bryosalmonae. The identity of PCR amplicons was confirmed by sequencing. With one exception, all the positive fish were found in waters from the regions where the average yearly temperatures and the environmental pollution are higher. This preliminary countrywide survey provided the first insight into the situation regarding T. bryosalmonae infection of wild salmonids in Slovenia.     

Effects of cage fish farming on phytoplankton community structure,biomass and primary production in an aquaculture area in the middle Adriatic Sea

In this study, we investigated the physical, chemical and biological parameters of the water column at two stations under different trophic conditions during a 1‐year period (from September 2005 to September 2006) in an aquaculture area. The investigation was performed monthly at a station inside the fish farm in Maslinova Bay (middle Adriatic Sea, Croatia) and at a control station located in the Hvar Channel in the vicinity of the farm. The results showed that the concentrations of dissolved nutrients were slightly enhanced at the farm station in comparison with the control station, although those differences were not statistically significant, nor were the differences in oxygen saturation recorded during the investigation period. As opposed to the chemical parameters, considerably higher deviations were recorded for biological parameters as demonstrated by a significant increase in phytoplankton biomass and primary production (measured in situ) at the farm station, particularly during the summer season. Phytoplankton community structure analysis showed that the phytoplankton composition at the farm was mostly determined by seasonal changes rather than by the influence of fish farming. In Maslinova Bay, no causal links were identified between increased biomass and the appearance of toxic species.     

Fish community composition of a tropical nonestuarine embayment in Zanzibar,Tanzania

ABSTRACT:   By using a seine net, fish samples were taken from the nonestuarine Chwaka Bay (Zanzibar, Tanzania) from the mangroves, mud/sand flats and seagrass beds. Sampling was done twice per month between November 2001 and October 2002. In total, 150 fish species belonging to 55 families were identified. Diversity ( H' ) ranged from 1.9 in mud/sand flats to 3.4 within the Chwaka seagrass beds. Mean density of fishes was significantly higher in the mangrove creeks than in any other habitat (mean = 238.7 ind./1000 m²). Highest, but non-significantly different mean biomasses were recorded in the mangrove creeks (1.7 kg/1000 m²) and in the Marumbi seagrass beds (1.6 kg/1000 m²). The mangrove channel had the lowest biomass (0.6 kg/1000 m²). A high overlap in species composition (as high as 93.4% similarity) was found for adjoining habitats (i.e. mangrove creeks and mangrove channel), while habitats that were far apart showed low overlap (6.6% similarity for the Marumbi seagrass beds and mangrove creeks). On average, 58.4 and 63.2% in terms of abundance and biomass, respectively, of the fish assemblage of Chwaka Bay were of commercial fishery importance. Thus, Chwaka Bay appears to be an important juvenile habitat for various commercially important fish species.     

Effects of fish farming on microbial planktonic communities in the middle Adriatic sea

The effects of farming on planktonic microbial communities were investigated at the coastal sea bass/sea bream farm in the oligotrophic middle Adriatic Sea. Analyses of nutrients, chlorophyll a, cyanobacteria (Prochlorococcus), heterotrophic bacteria and nanoflagellates (both pigmented and heterotrophic) were carried out on samples taken during six seasonal cruises at different water depths. Farming activity increased the natural concentrations of some nutrients (ammonium, nitrite, phosphate, dissolved inorganic nitrogen) and changed their seasonal pattern. The values still remained typical for oligotrophic environ‐ments demonstrating no risk for eutrophication. Enhanced nutrient supply provoked an immediate increase in abundances of both autotrophic and heterotrophic microbial groups (except pigmented nanoflagellates) and chlorophyll a. The effect of farming was more visible for the heterotrophic microbial component. Results from this study reveal a potential common pattern of microbial response to farming in the oligotrophic environments. It also suggests the importance of heterotrophic microbial web in transferring the matter and energy released from the fish farms in nutrient poor environments.     

Protease in sturgeon sperm and the effects of protease inhibitors on sperm motility and velocity

In mammals, proteases are present in sperm acrosome and play key role in fertilization. Sturgeon sperm has an acrosome, but its physiology, biochemistry, and potential role in fertilization are unknown. In the present study, we have observed high protease activity in acidic extract of intact sperm compared to that of seminal plasma in sterlet (Acipenser ruthenus). The protease activity was decreased and increased in acidic extract of motility-activated sperm and in the activation medium, respectively. Molecular analysis revealed total protease and serine (acrosin) protease activities in sperm acidic extract which was accumulated in a protein band with relative molecular mass of 35 kDa. Immunoelectron microscopy using an affinity-purified polyclonal antibody for boar acrosin localized the protease at the acrosome region. Moreover, initiation of sperm motility was inhibited after activation in the presence of inhibitors for both trypsin-like and chymotrypsin-like proteases, while the effects of protease inhibitors on sperm velocity were uncertain. Our results indicate similarities in physiology and biochemistry of acrosome between sturgeon and mammals and suggest potential role of protease in the initiation of sperm motility in sturgeon.