Shallow Hydrothermal Vent Bacteria and Their Secondary Metabolites with a Particular Focus on Bacillus

Extreme environments are hostile for most organisms, but such habitats represent suitable settings to be inhabited by specialized microorganisms. A marine shallow-water hydrothermal vent field is located offshore in northeast Taiwan, near the shallow shore of the southeast of Kueishantao Island (121°55′ E, 24°50′ N). Research on extremophilic microorganisms makes use of the biotechnological potential associated with such microorganisms and their cellular products. With the notion that extremophiles are capable of surviving in extreme environments, it is assumed that their metabolites are adapted to function optimally under such conditions. As extremophiles, they need specific culture conditions, and only a fraction of species from the original samples are recovered in culture. We used different non-selective and selective media to isolate bacterial species associated with the hydrothermal vent crab Xenograpsus testudinatus and the sediments of its habitat. The highest number of colonies was obtained from Zobell marine agar plates with an overall number of 29 genetically distinct isolates. 16S RNA gene sequencing using the Sanger sequencing method revealed that most of the bacterial species belonged to the phylum Firmicutes and the class Bacilli. The present study indicates that hydrothermal vent bacteria and their secondary metabolites may play an important role for the reconstruction of the evolutionary history of the phylum Procaryota.     

Lipid content and fatty acid composition of freshwater eels Anguilla japonica caught in different seasons and locations in South Korea

Fisheries Science - The objective of this study is to determine the lipid content and fatty acid composition of Anguilla japonica caught in South Korea. Seventy-nine eels caught at four different...     

Scalarane-Type Sesterterpenoids from the Marine Sponge Lendenfeldia sp. Alleviate Inflammation in Human Neutrophils

Sponge-derived scalaranes are remarkable sesterterpenoids previously found to exhibit profound inhibitory effects against neutrophilic inflammation. In our current work, we constructed the metabolomic profile of marine sponge Lendenfeldia sp. for the first time using a tandem mass spectrometry (MS/MS) molecular networking approach. The results highlighted the rich chemical diversity of these scalaranes, motivating us to conduct further research to discover novel scalaranes targeting neutrophilic inflammation. MS- and NMR-assisted isolation and elucidation led to the discovery of seven new homoscalaranes, lendenfeldaranes K–Q (1–7), characterized by methylation at C-24, together with five known derivatives, lendenfeldarane B (8), 25-nor-24-methyl-12,24-dioxoscalar-16-en-22-oic acid (9), 24-methyl-12,24,25-trioxoscalar-16-en-22-oic acid (10), felixin B (11), and 23-hydroxy-20-methyldeoxoscalarin (12). Scalaranes 1–4 and 6–12 were assayed against superoxide anion generation and elastase release, which represented the neutrophilic inflammatory responses of respiratory burst and degranulation, respectively. The results indicated that 1–3 and 6–12 exhibited potential anti-inflammatory activities (IC₅₀ for superoxide anion scavenging: 0.87~6.57 μM; IC₅₀ for elastase release: 1.12~6.97 μM).     

Herbicidal and biological characteristics of a new benzenesulfonylurea compound K-11451 under submerged paddy conditions

The new benzenesulfonylurea K-11451, an α-hydroxy-β-fluoropropyl- compound, applied at 3–9 g ha ⁻¹, controlled annual and perennial weeds grown in submerged paddy soil under greenhouse conditions. It effectively controlled barnyardgrass at growth stages varying from pre-emergence to the five-leaf stage. The compound inhibited acetolactate synthase, I₅₀ values for the enzyme isolated from barnyardgrass and rice being 56 and 67 nM , respectively. K-11451 inhibited the growth of rice when it was transplanted at a shallow depth (0–1 cm) and water leaching from the paddy soil was high (3–5 cm per day). With a water depth of 3 cm, the compound appeared to move readily down into the paddy soil and had the relatively short half-life of 15.2 days under submerged paddy conditions. A mixture of K-11451 + mefenecet + daimuron (9 + 250 + 250 g ha⁻¹) controlled almost all weeds in the paddy field without injury to rice, so that the combination could be used as a ‘one-shot’ herbicide in rice culture.     

A natural infection by the red sea bream iridovirus‐type Megalocytivirus in the golden mandarin fish Siniperca scherzeri

An outbreak of a Megalocytivirus infection was found in the golden mandarin fish Siniperca scherzeri during September and October 2016, in Korea. Phylogeny and genetic diversity based on the major capsid protein (MCP) and adenosine triphosphatase (ATPase) genes showed a new strain. Designated as GMIV, this strain derived from the golden mandarin fish was suggested to belong to the red sea bream iridovirus (RSIV)‐subgroup I. Additionally, this train clustered with the ehime‐1 strain from red sea bream Pagrus major in Japan and was distinguished from circulating isolates (RSIV‐type subgroup II and turbot reddish body iridovirus [TRBIV] type) in Korea. The infection level, evaluated by qPCR, ranged from 8.18 × 10² to 7.95 × 10⁶ copies/mg of tissue individually, suggesting that the infected fish were in the disease‐transmitting stage. The diseased fish showed degenerative changes associated with cytomegaly in the spleen as general sign of Megalocytivirus infection. The results confirm that the RSIV‐type Megalocytivirus might have crossed the environmental and species barriers to cause widespread infection in freshwater fish.     

Effect of solvent and blended polymer on electrical conductivity of PEDOT:PSS/polymer blended nanofibers

Poly(3,4-ethylenedioxythiophene)/poly(styrene sulfonate) (PEDOT:PSS) and polyethylene oxide (PEO) (or polyvinyl alcohol (PVA)) blended electrospun nanofibers were prepared in the presence of dimethyl sulfoxide (DMSO) and ethylene glycol (EG). The effects of added solvents (DMSO and EG) and blended polymers (PEO and PVA) on electrical conductivity and current-voltage (I-V) response were investigated. Electrical conductivity was dependent on both the additional solvent and blended polymers. PEDOT:PSS/PEO blended nanofibers showed a much higher electrical conductivity than PEDOT:PSS/PVA. EG blended PEDOT:PSS/PEO blended nanofibers showed much higher electrical conductivity than DMSO. The PEDOT:PSS/PEO/EG blended nanofibers web showed the highest value in I-V response.     

Pinnisterols A–C,New 9,11-Secosterols from a Gorgonian Pinnigorgia sp.

Three new 9,11-secosterols, pinnisterols A–C (1–3), were isolated from a gorgonian coral Pinnigorgia sp., collected off the waters of Taiwan. The structures of these compounds were elucidated on the basis of spectroscopic methods. The new sterols 1 and 3 displayed significant inhibitory effects on the generation of superoxide anions and the release of elastase by human neutrophils, and sterol 1 was found to show moderate cytotoxicity in hepatic stellate cells (HSCs).     

The effect of fertilization on early growth of konara oak and Japanese zelkova seedlings planted in a harvested pitch pine plantation

We determined a suitable amount of fertilizer for konara oak(Quercus serrata) and Japanese zelkova(Zelkova serrata) planted in a harvested pitch pine(Pinus rigida) plantation. Two-year-old bare-root seedlings of konara oak and one-year-old containerized seedlings of Japanese zelkova were planted in April 2011. Three plots were established for each tree species to evaluate each of three fertilization applications. Solid compound fertilizer(N:P:K = 3:4:1) was applied yearly in three amounts(control: no fertilization, F1: 180 kg ha-1, and F2:360 kg ha-1), every May from 2011 to 2013. We measured the root collar diameter and height, and analyzed the compartmental N and P concentrations. Compartmental N concentrations of konara oak and Japanese zelkova were not consistent based on amount of fertilization. However,the compartmental P concentrations of konara oak and Japanese zelkova were significantly different in the order of F2, F1, and control. Although the differences in growth of konara oak appeared after 3 years of fertilization,Japanese zelkova showed differences after only 2 years of fertilization owing to differences in seedling type. Growth of konara oak was affected by fertilization at F1 and F2 in2013. However, growth of Japanese zelkova was affected only at F2. Nutrient demand of Japanese zelkova appeard to be higher than that of konara oak, at least during the early growing period. Results from this study could be practically used in harvested pitch pine plantations to determine appropriate fertilization regimes.