The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism

Diatoms are unicellular algae with plastids acquired by secondary endosymbiosis. They are responsible for approximately 20% of global carbon fixation. We report the 34 million-base pair draft nuclear genome of the marine diatom Thalassiosira pseudonana and its 129 thousand-base pair plastid and 44 thousand-base pair mitochondrial genomes. Sequence and optical restriction mapping revealed 24 diploid nuclear chromosomes. We identified novel genes for silicic acid transport and formation of silica-based cell walls, high-affinity iron uptake, biosynthetic enzymes for several types of polyunsaturated fatty acids, use of a range of nitrogenous compounds, and a complete urea cycle, all attributes that allow diatoms to prosper in aquatic environments.     

Effect of Fusarium toxin-contaminated triticale and forage-to-concentrate ratio on fermentation and microbial protein synthesis in the rumen

In this study, the effect of Fusarium toxin-contaminated triticale (FUS) at high (60%) and low (30%) concentrate proportion in ruminant rations on ruminal fermentation, microbial protein synthesis and digestibility was investigated, using in vivo and in vitro methods. Significant effects of the forage-to-concentrate ratio on ruminal degradation and digestibility of crude nutrients and detergent fibre fractions as well as on the pH value and the concentration of short chain fatty acids (SCFA) in rumen fluid were found. The production of SCFA was affected, and the degradation of crude fibre and neutral detergent fibre in the rumen was reduced by the inclusion of FUS at high concentrate proportion. The efficiency of microbial crude protein synthesis was higher in diets with 60% than in diets with 30% concentrates, but was impaired in the presence of FUS in vitro at the high concentrate level. Marginal effects of FUS on the amino acid pattern of microbial protein were detected. It was concluded that the use of FUS in high concentrate diets can influence ruminal fermentation and microbial protein synthesis at a dietary deoxynivalenol concentration below 5 mg/kg dry matter.     

Extending the range of an ancient crop, <Emphasis Type="Italic">Salvia hispanica</Emphasis> L.—a new ω3 source

Chia, Salvia hispanica L., was well developed into a cultivated crop and an important component of Mesoamerican cultures and nutrition. Early Mesoamerican breeders produced lines with well developed agronomic characteristics including good, uniform seed yield and retention. Seed retention in particular is disadvantageous for survival in the wild. Maize, beans and squash were developed into important crops concomitant with chia in Mesoamerica but unlike these other crops lack of photoperiodic variability in floral induction limited the spread of chia cultivation into North America. There has been renewed interest in chia as an excellent source of ω3 fatty acids and dietary fiber for healthy diets. Such highly unsaturated oils also are useful starting materials for many renewable chemicals. Further we find chia grows very well in Midwestern and Eastern USA but flowers too late in the season for seeds to mature before killing frosts. We set out to develop the genetic diversity in floral induction to provide germplasm for production in the US and other temperate areas of the world. We demonstrate that new early flowering lines are able to flower under a photoperiod of 15 h under greenhouse conditions. In field conditions, some selected new lines flowered at a photoperiod of 14 h and 41 min during the 2009 growing season in Kentucky and can produce seeds in a range of environments in temperate areas.     

Neuromuscular and cardiovascular effects of pancuronium bromide in calves anesthetized with halothane

Pancuronium bromide was administered to calves to define the dosage level necessary to produce surgical relaxation (90% to 99% reduction of base-line evoked, hindlimb digital-extensor muscle twitch tension). Initial dosage level requirement was 43 +/- 9 micrograms/kg of body weight. Calves with this degree of relaxation required 26 +/- 14 minutes to achieve 50% recovery and 43 +/- 19 minutes to achieve complete return of base-line muscle twitch. Calves given a repeat injection of pancuronium at base-line muscle twitch required 27 +/- 9 micrograms/kg to achieve relaxation similar to that of the 1st dose. The 2nd dose did not last as long as the 1st, with complete recovery occurring in 37 +/- 12 minutes. Maximum evoked tension occurred at 200- to 400-g resting tension on the hoof. There was an absence of heart rate or blood pressure changes after injection of relaxant and a variable and inconsistent fade response to train-of-four and tetanic stimulus of the facial muscles. Acid-base values were alkalemic (pHa 7.5 +/- 0.08) when ventilation was controlled at eucapnia (PaCO2, 25 to 45 mm of Hg).     

The spatial heterogeneity of chemical properties in acid forest soils and its importance for tree nutrition

For two sites in the Black Forest, presence, extent and ecological significance of structure-dependent chemical. heterogeneity in the rhizosphere of acid forest soils is discussed. The heterogeneity is demonstrated by two independent methods. First, by comparison of soil solution composition in (quasi-) equilibrium with undisturbed soil cores and sieved soil samples. Water soluble K, Ca and Mg show a selective depletion on aggregate surfaces. Second, by comparison of cumulated amounts of exchangeable ions obtained from percolated homogenized soil samples and undisturbed soil cores. The release of exchangeable K, Ca and Mg is less, if soil structure is not destroyed. The finding that aggregate surfaces are more depleted of exchangeable and water-soluble K, Ca and Mg is common in aggregated acid forest soils. As aggregate surfaces bind soil water with low suction, that is where the roots preferentially grow. Consequently, a considerable underestimation of chemical stress in the rhizosphere is possible, if soil structure is destroyed for analysis.     

Motions of molecules in liquids: viscosity and diffusivity

The fluidity of a simple liquid is proportional to its degree of expansion over the volume, V(0), at which its molecules are so crowded as to inhibit self-diffusion and viscous (as distinguished from plastic) flow. The equation of proportionality is 1/eta = B[(V - V(0))/V(0)] where eta is the viscosity and V is the molal volume. Values of B are the same for normal paraffins from C(3)H(8) to C(7)H(16) and then decrease progressively as the paraffin lengths increase. Values for other liquids, C(6)H(6), CCl(4), P(4), CS(2), CHCl(3), and Hg, appear to vary with repulsive forces. liquids can be moderately fluid when expanded by less than 10 percent; this shows the unreality of some theoretical treatments of the liquid state. Diffusivity begins from the temperature at which V equals V(0) and can be correlated for temperature dependence, and for solute-solvent interrelations.     

Brightness Temperatures of Saturn's Disk and Rings at 400 and 700 Micrometers

Saturn was observed in two broad submillimeter photometric bands with the rings nearly edge-on. The observed brightness temperatures fall below the predictions of atmospheric models constructed from data at shorter wavelenths, indicating the presence of an opacity source besides pressure-broadened hydrogen lines in the submillimeter region. In combination with earlier measurements at larger inclination angles, these results yield a 400-micrometer brightness temperature for the rings of approximately 75 K.