Mitochondrial genome-knockout cells demonstrate a dual mechanism of action for the electron transport complex I inhibitor mycothiazole

Mycothiazole, a polyketide metabolite isolated from the marine sponge Cacospongia mycofijiensis, is a potent inhibitor of metabolic activity and mitochondrial electron transport chain complex I in sensitive cells, but other cells are relatively insensitive to the drug. Sensitive cell lines (IC(50) 0.36-13.8 nM) include HeLa, P815, RAW 264.7, MDCK, HeLa S3, 143B, 4T1, B16, and CD4/CD8 T cells. Insensitive cell lines (IC(50) 12.2-26.5 μM) include HL-60, LN18, and Jurkat. Thus, there is a 34,000-fold difference in sensitivity between HeLa and HL-60 cells. Some sensitive cell lines show a biphasic response, suggesting more than one mechanism of action. Mitochondrial genome-knockout ρ(0) cell lines are insensitive to mycothiazole, supporting a conditional mitochondrial site of action. Mycothiazole is cytostatic rather than cytotoxic in sensitive cells, has a long lag period of about 12 h, and unlike the complex I inhibitor, rotenone, does not cause G(2)/M cell cycle arrest. Mycothiazole decreases, rather than increases the levels of reactive oxygen species after 24 h. It is concluded that the cytostatic inhibitory effects of mycothiazole on mitochondrial electron transport function in sensitive cell lines may depend on a pre-activation step that is absent in insensitive cell lines with intact mitochondria, and that a second lower-affinity cytotoxic target may also be involved in the metabolic and growth inhibition of cells.     

When nature takes over from man: Dead wood accumulation in previously managed oak and beech woodlands in North-western and Central Europe

The accumulation of dead wood and its characteristics are analysed in forests that have been withdrawn from regular silvicultural management and left unmanaged between 10 and 150 years ago. These forests are dominated by beech (Fagus sylvatica) and oak (Quercus robur and Quercus petraea) and located in the lowlands of North-western and Central Europe.     

Testing the durability of timber above ground: A review on methodology

The majority of timber products in outdoor use are exposed above ground, e.g. façades, terrace decking, playground equipment, garden furniture, windows, balconies or carports. In contrast, the durability of wood and wood products is most often determined in laboratory against Basidiomycete monocultures or in-ground field tests, where wood samples are submitted to permanent wetting. Worldwide, only a few above ground field test methods evaluating durability against fungal decay have been standardized. Wood used in above ground situations can be exposed to a wide range of moisture loads reflecting different design details such as varying shelter, distance to ground, ventilation and water trapping, whereas temperature and rainfall variations are overall influences on service life performance. The aim of this review was to gather information about standardized and non-standardized above ground field test methods used to determine the durability of wood and wood-based products. In total, more than 60 methods have been evaluated according to different criteria, such as principle set-up and design, severity of exposure and distance to ground. Their suitability to reflect a certain exposure under real-life conditions is discussed as well as practical aspects regarding acceleration measures, decay assessment and practicability, costs and time efforts.     

Detection of pine needle diseases caused by Dothistroma septosporum,Dothistroma pini and Lecanosticta acicola using different methodologies

Dothistroma and Lecanosticta needle blight are among the most damaging foliage diseases in plantations and natural pine stands worldwide, and are therefore listed as quarantine organisms in numerous countries. The aim of this study was to validate different methodologies used for the detection of both diseases. Based on multiplex quantitative PCR (qPCR), simultaneous detection and discrimination of the three pathogens Dothistroma septosporum, Dothistroma pini and Lecanosticta acicola were possible in symptomatic needles. Additionally, the same set of needles was analysed for the presence of all three pathogens using novel end‐point PCR assays followed by enzymatic digestion of PCR products. Results were compared with the qPCR data, and for validation, collected needles were screened morphologically for the presence of typical fruiting bodies and spores. Differences in detection sensitivity were found between the detection tools. The qPCR‐based detection allowed for specific and efficient identification and quantification of all three pathogens simultaneously. At the same time, conventional PCR assays, which target the multicopy ITS region, showed increased detection sensitivity and can be conducted without the use of expensive infrastructure and reagents.     

DIBOA: Fate in soil and effects on root-knot nematode egg numbers

The benzoxazinoid 2,4-dihydroxy-1,4-benzoxazin-3-one (DIBOA) is produced by rye (Secale cereale) and may contribute to plant-parasitic nematode suppression when rye plants are incorporated as a green manure. We investigated the fate of DIBOA in soil and DIBOA's effects on nematode reproduction. Soil in plastic bags was treated with DIBOA at concentrations ranging from 1.1 to 18 μg g⁻¹ dry soil, and with the root-knot nematode Meloidogyne incognita. Control soils were treated with water or with 0.31% methanol, with or without nematodes. DIBOA concentrations extracted from the soil were measured at selected times for 5 consecutive days. The soil from each bag was then placed into a pot in the greenhouse, and a cucumber seedling was transplanted into each pot. Five weeks later, only the highest DIBOA concentration, 18 μg g⁻¹ soil, reduced nematode egg numbers. At 0 h, DIBOA measured in soil ranged from 19.68 to 35.51% of the initial DIBOA concentration, and was dependent on the concentration added to the soil. DIBOA half-life was from 18 to 22 h, and very little DIBOA was present in soil after 120 h. Identified breakdown products accounted for only 4% at maximum of the initially added DIBOA. The results of our study demonstrate that high soil concentrations of DIBOA are necessary to suppress M. incognita; DIBOA may not be a major factor in nematode suppression by a rye cover crop.     

One-third of reef-building corals face elevated extinction risk from climate change and local impacts

The conservation status of 845 zooxanthellate reef-building coral species was assessed by using International Union for Conservation of Nature Red List Criteria. Of the 704 species that could be assigned conservation status, 32.8% are in categories with elevated risk of extinction. Declines in abundance are associated with bleaching and diseases driven by elevated sea surface temperatures, with extinction risk further exacerbated by local-scale anthropogenic disturbances. The proportion of corals threatened with extinction has increased dramatically in recent decades and exceeds that of most terrestrial groups. The Caribbean has the largest proportion of corals in high extinction risk categories, whereas the Coral Triangle (western Pacific) has the highest proportion of species in all categories of elevated extinction risk. Our results emphasize the widespread plight of coral reefs and the urgent need to enact conservation measures.     

Estimates of covariance functions for growth from birth to 630 days of age in Nelore cattle.

Weight records of Brazilian Nelore cattle, from birth to 630 d of age, recorded every 3 mo, were analyzed using random regression models. Independent variables were Legendre polynomials of age at recording. The model of analysis included contemporary groups as fixed effects and age of dam as a linear and quadratic covariable. Mean trends were modeled through a cubic regression on orthogonal polynomials of age. Up to four sets of random regression coefficients were fitted for animals' direct and maternal, additive genetic, and permanent environmental effects. Changes in measurement error variances with age were modeled through a variance function. Orders of polynomial fit from three to six were considered, resulting in up to 77 parameters to be estimated. Models fitting random regressions modeled the pattern of variances in the data adequately, with estimates similar to those from corresponding univariate analysis. Direct heritability estimates decreased after birth and tended to be lowest at ages at which maternal effect estimates tended to be highest. Maternal heritability estimates increased after birth to a peak around 110 to 120 d of age and decreased thereafter. Additive genetic direct correlation estimates between weights at standard ages (birth, weaning, yearling, and final weight) were moderate to high and maternal genetic and environmental correlations were consistently high.     

Efficiency of sample-based indices for spatial pattern recognition of wild pistachio (<Emphasis Type="Italic">Pistacia atlantica</Emphasis>) trees in semi-arid woodlands

The efficiency of sample-based indices proposed to quantify the spatial distribution of trees is influenced by the structure of tree stands, environmental heterogeneity and degree of aggregation. We evaluated 10 commonly used distance-based and 10 density-based indices using two structurally different stands of wild pistachio trees in the Zagros woodlands, Iran, to assess the reliability of each in revealing stand structure in woodlands. All trees were completely stem-mapped in a nearly pure (40 ha) and a mixed (45 ha) stand. First, the inhomogeneous pair correlation function [g(r)] and the Clark–Evans index (CEI) were used as references to reveal the true spatial arrangement of all trees in these stands. The sampled data were then evaluated using the 20 indices. Sampling was undertaken in a grid based on a square lattice using square plots (30 m × 30 m) and nearest neighbor distances at the sample points. The g(r) and CEI statistics showed that the wild pistachio trees were aggregated in both stands, although the degree of aggregation was markedly higher in the pure stand. Three distance- and six density-based indices statistically verified that the wild pistachio trees were aggregated in both stands. The distance-based Hines and Hines statistic (h _t ) and the density-based standardised Morisita (I _p ), patchiness (IP) and Cassie (C _A ) indices revealed aggregation of the trees in the two structurally different stands in the Zagros woodlands and the higher clumping in the pure stand, whereas the other indices were not sensitive enough.     

Effect of target spot on soybean yield and factors affecting this relationship

The lack of robust estimates of soybean yield losses due to target spot led to this study. The objective was to determine whether soybean yield at stage R8 (W, expressed as kg ha⁻¹) was related to target spot severity at soybean stage R5–R6 (S, expressed as %) and to identify variables that could affect this relationship. Plot-level estimates of mean disease severity and yield from 41 selected Uniform Fungicide Trials carried out in Brazil during 2012–2016 growing seasons were used to estimate linear regression coefficients for the relationship between yield and target spot severity through random-coefficient mixed effects model analysis. The overall estimated mean regression intercept and slope were  = 3564 kg ha⁻¹ (disease-free yield) and  = −17.1 kg ha⁻¹ %⁻¹ (W decrease per percent increase in S), respectively. The model was then refitted with different covariates to determine their effects on model parameters. β₀ was influenced by baseline yield (less than or greater than 3300 kg ha⁻¹) and β₁ was affected by yield response to fungicide treatments. Estimated yield loss at 50% target spot severity ranged from 8% to 42%. Cultivar also had a significant effect on the magnitude of yield reduction due to target spot, which ranged from 11% to 42%, depending on the cultivar.     

Spatial and temporal abundance of the solanum fruit fly, Bactrocera latifrons (Hendel), in Morogoro,Tanzania

Bactrocera latifrons is a newly invasive pest species in eastern Africa. Surveys to determine the spatial and temporal abundance of this fruit fly in the Morogoro Region, Eastern Central Tanzania, were conducted from April 2007 to March 2008. The surveys involved trapping of adult flies and collection of host fruits to determine the emergence of adults. The results indicated that the population of B. latifrons was generally low but that adult flies were present throughout the survey period. The population of B. latifrons based on infestation rates and incidence in host fruits, seems to be relatively high during the wet seasons, probably because of availability of many hosts. However, the population of the pest as determined by trapping, indicated a low population but without a specific pattern. The pest shows minimal response to the used attractants. The surveys further indicate that B. latifrons is more abundant in low to medium altitude areas compared to high altitude areas. The results indicate that, because of its low population, B. latifrons might be a minor pest. Results further suggest the possibility of establishing B. latifrons free areas where export valued solanaceous crops can be grown, but further research over longer periods would be needed to establish this.