Estimation of actual evapotranspiration for a drip-irrigated Merlot vineyard using a three-source model

A study was performed in order to evaluate the three-source model (Clumped model) for direct estimation of actual evapotranspiration (ET_a) and latent heat flux (LE) over a drip-irrigated Merlot vineyard trained on a vertical shoot positioned system (VSP) under semi-arid conditions. The vineyard, with an average fractional cover of 30%, is located in the Talca Valley, Region del Maule, Chile. The performance of the Clumped model was evaluated using an eddy covariance system during the 2006/2007 and 2007/2008 growing seasons. Results indicate that the Clumped model was able to predict ET_a with a root mean square error (RMSE), mean bias error (MBE), and model efficiency (EF) of 0.33, −0.15 mm day⁻¹ and 74%, respectively. Also, the Clumped model simulated the daytime variation of LE with a RMSE of 36 W m⁻², MBE of −8 W m⁻², and EF of 83%. Major disagreement (underestimated values) between observed and estimated values of ET_a was found for clear days after rainfall or foggy days, but underestimated values were less than 10% of the data analysis. The results obtained in this study indicate that the Clumped model could be used to directly estimate vine water requirements for a drip-irrigated vineyard trained on a VSP. However, application of the Clumped model requires a good characterization of the drip-irrigated vineyard architecture.     

Simulation of transpiration, drainage, N uptake, nitrate leaching, and N uptake concentration in tomato grown in open substrate

Free-drainage or “open” substrate system used for vegetable production in greenhouses is associated with appreciable NO₃⁻ leaching losses and drainage volumes. Simulation models of crop N uptake, N leaching, water use and drainage of crops in these systems will be useful for crop and water resource management, and environmental assessment. This work (i) modified the TOMGRO model to simulate N uptake for tomato grown in greenhouses in SE Spain, (ii) modified the PrHo model to simulate transpiration of tomato grown in substrate and (iii) developed an aggregated model combining TOMGRO and PrHo to calculate N uptake concentrations and drainage NO₃⁻ concentration. The component models simulate NO₃⁻-N leached by subtracting simulated N uptake from measured applied N, and drainage by subtracting simulated transpiration from measured irrigation. Three tomato crops grown sequentially in free-draining rock wool in a plastic greenhouse were used for calibration and validation. Measured daily transpiration was determined by the water balance method from daily measurements of irrigation and drainage. Measured N uptake was determined by N balance, using data of volumes and of concentrations of NO₃⁻ and NH₄⁺ in applied nutrient solution and drainage. Accuracy of the two modified component models and aggregated model was assessed by comparing simulated to measured values using linear regression analysis, comparison of slope and intercept values of regression equations, and root mean squared error (RMSE) values. For the three crops, the modified TOMGRO provided accurate simulations of cumulative crop N uptake, (RMSE = 6.4, 1.9 and 2.6% of total N uptake) and NO₃⁻-N leached (RMSE = 11.0, 10.3, and 6.1% of total NO₃⁻-N leached). The modified PrHo provided accurate simulation of cumulative transpiration (RMSE = 4.3, 1.7 and 2.4% of total transpiration) and cumulative drainage (RMSE = 13.8, 6.9, 7.4% of total drainage). For the four cumulative parameters, slopes and intercepts of the linear regressions were mostly not statistically significant (P < 0.05) from one and zero, respectively, and coefficient of determination (r²) values were 0.96-0.98. Simulated values of total drainage volumes for the three crops were +21, +1 and −13% of measured total drainage volumes. The aggregated TOMGRO-PrHo model generally provided accurate simulation of crop N uptake concentration after 30-40 days of transplanting, with an average RMSE of approximately 2 mmol L⁻¹. Simulated values of average NO₃⁻ concentration in drainage, obtained with the aggregated model, were −7, +18 and +31% of measured values.     

Salmonid fish viruses and cell interactions at early steps of the infective cycle

A flow cytometric virus-binding assay that directly visualizes the binding and entry of infectious pancreatic necrosis virus (IPNV), infectious haematopoietic necrosis virus (IHNV) and virus haemorrhagic septicaemia virus (VHSV) to several cell lines was established. The highest efficiency of binding was shown by the BF-2 cell line and this was used to study, at the attachment level, the interactions of these cells with salmonid fish viruses in coinfections, and to further determine if the earliest stage of the viral growth cycle could explain the previously described loss of infectivity of IHNV when IPNV is present. Our results demonstrated that IPNV binds to around 88% of cells either in single or dual infections, whereas IHNV attachment always decreased in the presence of any of the other viruses. VHSV binding was not affected by IPNV, but coinfection with IHNV reduced the percentage of virus-binding cells, which suggests competition for viral receptors or co-receptors. Internalization of the adsorbed IHNV was not decreased by coinfection with IPNV, so the hypothetical competence could be restricted to the binding step. Treatment of the cells with antiviral agents, such as amantadine or chloroquine, did not affect the binding of IPNV and VHSV, but reduced IHNV binding by more than 30%. Tributylamine affected viral binding of the three viruses to different degrees and inhibited IPNV or IHNV entry in a large percentage of cells treated for 30 min. Tributylamine also inhibited IHNV cytopathic effects in a dose-dependent manner, decreasing the virus yield by 4 log of the 50% endpoint titre, at 10 mm concentration. IPNV was also inhibited, but at a lower level. The results of this study support the hypothesis that IHNV, in contrast to VHSV or IPNV, is less efficient at completing its growth cycle in cells with a simultaneous infection with IPNV. It can be affected at several stages of viral infection and is more sensitive to the action of antiviral compounds.     

Outdoor mass microalgae production in Bahia Kino, Sonora, NW Mexico

The diatom Chaetoceros muelleri was grown in outdoor mass cultures under the winter, spring and summer conditions of Bahia Kino, Sonora, NW Mexico. The solar irradiance in winter was close to 60% of that available in spring and summer, but the cell concentrations and the harvestable biomass were one order of magnitude higher in spring and summer than in winter. There was no difference between the biomass harvested after 2 and 3 days in winter and summer, whereas in spring it was higher after 3 days. The protein content was significantly lower in winter, and carbohydrates and lipids were higher in winter and spring. The number of cells and the amount of harvestable biomass of outdoor cultures of C. muelleri depend on the temperature prevailing in each season, which causes significant differences in growth rates and in biochemical composition.     

Physiological responses of Quercus oleoides (Schltdl & Cham) to soils contaminated by diesel

ABSTRACT

Oil pollution is a worldwide threat to the environment that affects the development of plants. The effect of soil contaminated by diesel on the physiological responses of seedlings of Quercus oleoides was investigated in two independent experiments. We proposed that physiological performance will decrease when seedlings are exposed to higher concentration of contamination. At the first experiment, levels of pollution with diesel were of 0%, 5%, 10% and 15%, and 0%, 2% and 3.5% in the second one. In the first experiment, photosynthetic rate, stomatal conductance, transpiration and total chlorophyll of Q. oleoides were higher in the control seedling, and lower in treatments of pollution with 5%, 10% and 15% of diesel during 3 days of treatment. Only, seedlings in soil polluted with 5% of diesel survived up to 16 days; they showed a photosynthetic rate of 5 μmol m^?2 s^?1, which was lower than control seedlings (9 μmol m^?2 s^?1). This pattern was observed in stomatal conductance, transpiration and relative water content. Surprisingly, in the second experiment, seedlings showed a higher photosynthetic rate and growth at 2% of diesel-contaminated soil than control seedlings, a phenomenon known as hormesis. In both experiments, soil respiration was proportional to soils contaminated. We concluded that Q. oleoides is highly vulnerable in soils contaminated with above 5% of diesel, but it maintains its physiological activities in soils contaminated below 2%, suggesting that seedlings can grow under low concentration of diesel contaminant, and may be used in phytoremediation of soils with low concentrations of diesel contamination.     

Design and validation of a RT‐qPCR procedure for diagnosis and quantification of most types of infectious pancreatic necrosis virus using a single pair of degenerated primers

Infectious pancreatic necrosis virus (IPNV) is an important virus which affects the salmonid aquaculture industry worldwide; therefore, it is important to develop rapid and reliable methods of diagnosis to detect the disease at early stages. Nowadays, RT‐qPCR is replacing other methods because it provides additional information on the viral load, which is important to have a better understanding of the virus replication level and of the stage of the infection and its risk level. The main problem stems from the high diversity of this virus, which can compromise the reliability of the diagnosis. In this study, we have designed an RT‐qPCR procedure for diagnosis and quantification of IPNV based on a single pair of primers targeted to segment B. The procedure has been validated, in vitro and in vivo, testing two different types of standards against seven reference strains and 23 field isolates from different types. The procedure is reliable for the detection of any type, with a detection limit of 31 TCID₅₀ mL^?1, 50 pfu mL^?1 or 66 RNA copies mL^?1, depending on the standard. All the standard curves showed high reliability (R² > 0.95). The results support the high reliability of this new procedure for the diagnosis and quantification of IPNV.     

Soybean molasses as an organic carbon source in the farming of Litopenaeus vannamei (Boone, 1931) in a biofloc system

Soybean molasses was evaluated as a partial replacement for sugarcane molasses as a carbon source for biofloc development in the superintensive culture of Pacific white shrimp (Litopenaeus vannamei). A 50‐day study was conducted with juvenile (3.2 g) shrimp stocked in 16 800 L tanks at a stocking density of 250 shrimp m^?3. Control of total ammonia concentration was performed by the addition of combined mixtures of soybean and sugarcane molasses to the culture water. Three different molasses treatments were evaluated using different soybean‐to‐sugarcane molasses ratios: 15–85%, 38–62% and 60–40% respectively. The control group was treated only with sugarcane molasses. Water quality, chlorophyll a concentration, heterotrophic bacterial load, Vibrio spp. concentration and zootechnical indexes were all evaluated. Total ammonia concentration was controlled by heterotrophic and chemotrophic pathways. Biofloc formation, as quantified by measuring the total suspended solids, was not altered. The Vibrio spp. concentration showed a significant reduction in treatments with soybean‐to‐sugarcane molasses ratios of 38–62% and 60–40%. All combined mixtures of soybean and sugarcane molasses could maintain water quality and productivity in the superintensive culture of L. vannamei using the biofloc system. Thus, the potential use of a residue from agroindustry as a carbon source in a biofloc culture is demonstrated.     

Effects of Broomrape Parasitism on Sunflower Plants: Growth,Development, and Mineral Nutrition

Sunflower broomrape (Orobanche cumana Wallr.) is a parasitic plant that infects sunflower (Helianthus annuus L.) plants. In this work, sunflower plants were grown under greenhouse conditions in pots with the substrate infested or non-infested with broomrape seeds. At different numbers of days after sowing, plant height, internode lengths, number of leaves, head diameter, mineral composition of leaves, and potassium (K) concentration in stem were measured. The negative effects of broomrape parasitism were assessed from 57 d after sowing, when broomrape started to emerge. Parasitized plants exhibited lower shoot dry weight, height, and head diameter than control plants. The reduction in internode lengths was associated with a decrease in the gradient of K concentration from basal to apical stem. The mineral composition of leaves was also affected in parasitized plants. The concentrations of calcium (Ca), magnesium (Mg), manganese (Mn), and zinc (Zn) in leaves of parasitized plants were lower than those of the control plants, while there were few differences for K, phosphorus (P), iron (Fe), and copper (Cu). The effects of parasitism are discussed in relation to their competition for resources and to perturbations of the host physiology such as hormonal and water balance.     

Nutritional response of seedling tomato plants under different lighting treatments

In order to describe the effect of complementary artificial light supply on the nutrient status of tomato seedlings, fluorescent lamps were compared to each other. Nitrogen (N), phosphorus (P), and potassium (K) concentrations were measured (mg g^?1 dry matter). Blue, red and far-red relationships were established. The N, P and K higher concentration and uptake have been found under high efficiency fluorescent lamps. Phosphorus uptake increasing was observed at high levels of irradiation. Potassium concentration is significantly higher under compact fluorescent lamps. The relationship between ratios and N, P and K extractions were used as indicators of limitation for plant. The ratio N/P and N/K present a low relation with N extraction. The ratio N/P presents a significant correlation with P extraction, also the ratios N/K and P/K with K extraction. Significant differences in constant of lineal equation have been found in P/K ratio and K extraction.     

Weed abundance and soil seedbank responses to tillage systems in continuous maize crops

Weed abundance in crops undergoes frequent changes, often due to changes in tillage practices. Annual species, with quick germination, a short vegetative stage, profuse seed production and long-lived seeds become problematic under zero-tillage systems. Portulaca oleracea L. and Amaranthus blitoides L. are widespread weeds in the Mediterranean area, prominent in irrigated crops. We studied the total weed abundance in the field, and specifically these two species (Portulaca oleracea and Amaranthus blitoides) with high frequency of occurrence in monoculture maize, from 2012 to 2014, in the field and soil seedbank. Results showed significant differences between zero-tillage (ZT) and conventional tillage (CT) systems on total weed abundance and relative abundance of Portulaca oleracea. Total weed abundance decreased in ZT plots (from 136 plants m^?2 to 25 and 46 plants m^?2, in 2013 and 2014 respectively). The same trend was observed in Portulaca oleracea recorded in ZT plots, but the abundance of Amaranthus blitoides did not vary in this system. Weed seedling germination and weed seed numbers both of total weed seedbank and Portulaca oleracea, were greater in ZT plots compared to CT, regarding Amaranthus blitoides seedling germination and seed count, the values did not increase with ZT, in continuous maize crops.