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951.
Julie Betbeder Marianne Laslier Laurence Hubert-Moy Françoise Burel Jacques Baudry 《Landscape Ecology》2017,32(9):1867-1879
Context
The ability to detect ecological networks in landscapes is of utmost importance for managing biodiversity and planning corridors.Objectives
The objective of this study was to evaluate the information provided by a synthetic aperture radar (SAR) image for landscape connectivity modeling compared to aerial photographs (APs).Methods
We present a novel method that integrates habitat suitability derived from remote sensing imagery into a connectivity model to explain species abundance. More precisely, we compared how two resistance maps constructed using landscape and/or local metrics derived from AP or SAR imagery yield different connectivity values (based on graph theory), considering hedgerow networks and forest carabid beetle species as a model.Results
We found that resistance maps using landscape and local metrics derived from SAR imagery improve landscape connectivity measures. The SAR model is the most informative, explaining 58% of the variance in forest carabid beetle abundance. This model calculates resistance values associated with homogeneous patches within hedgerows according to their suitability (canopy cover density and landscape grain) for the model species.Conclusions
Our approach combines two important methods in landscape ecology: the construction of resistance maps and the use of buffers around sampling points to determine the importance of landscape factors. This study was carried out through an interdisciplinary approach involving remote sensing scientists and landscape ecologists. This study is a step forward in developing landscape metrics from satellites to monitor biodiversity.952.
Andrew G. Merschel Emily K. Heyerdahl Thomas A. Spies Rachel A. Loehman 《Landscape Ecology》2018,33(7):1195-1209
Context
In the interior Northwest, debate over restoring mixed-conifer forests after a century of fire exclusion is hampered by poor understanding of the pattern and causes of spatial variation in historical fire regimes.Objectives
To identify the roles of topography, landscape structure, and forest type in driving spatial variation in historical fire regimes in mixed-conifer forests of central Oregon.Methods
We used tree rings to reconstruct multicentury fire and forest histories at 105 plots over 10,393 ha. We classified fire regimes into four types and assessed whether they varied with topography, the location of fuel-limited pumice basins that inhibit fire spread, and an updated classification of forest type.Results
We identified four fire-regime types and six forest types. Although surface fires were frequent and often extensive, severe fires were rare in all four types. Fire regimes varied with some aspects of topography (elevation), but not others (slope or aspect) and with the distribution of pumice basins. Fire regimes did not strictly co-vary with mixed-conifer forest types.Conclusions
Our work reveals the persistent influence of landscape structure on spatial variation in historical fire regimes and can help inform discussions about appropriate restoration of fire-excluded forests in the interior Northwest. Where the goal is to restore historical fire regimes at landscape scales, managers may want to consider the influence of topoedaphic and vegetation patch types that could affect fire spread and ignition frequency.953.
Purpose
Sulfonamides are widely used for the prevention and treatment of bacterial infections, hard-degraded contaminants distributed in the environment if they are discharged into the soil and water. Biochar could probably influence the geochemical behavior of ionized antibiotics in the soils.Materials and methods
To determine the sorption/desorption of three representative sulfonamides (SAs) in soils amended with biochar, we investigated the effects of water pH, Cu2+, and dissolved humic acid on the sorption of sulfamethoxazole (SMX), sulfamethazine (SMZ), and sulfadiazine (SD) onto two different soil samples (S1 pH?=?5.13 and S2 pH?=?7.33) amended with wheat straw-derived biochar (size 0.5~0.6 mm).Results and discussion
Batch experiments showed that the sorption/desorption isotherms of SAs on soil with/without biochar followed the Freundlich model. The biochar had a strong adsorption potential for SMX, SMZ, and SD both in S1 and S2 at low water pH. Except for SMX, the presence of Cu2+ inhibited the sorption of SMZ and SD through competing hydrophobic adsorption region in soils. HA suppressed the sorption of three sulfonamides in soil S2 by electrostatic repulsion under alkaline condition. The soil leaching column experiments showed the SA transport in soils, and S1 and S2 amended with biochar (0.5 and 1.0 wt%) brought about 12–20 % increase in SMX, SMZ, and SD retention compared to the untreated soil.Conclusions
The results indicated that the presence of biochar effectively mitigated the mobility of ionized antibiotics such as SMX, SMZ, and SD in soils, which helps us reconsider the potential risk of antibiotics in the environment.954.
Zhijie Chen Heikki Setälä Shicong Geng Shijie Han Shuqi Wang Guanhua Dai Junhui Zhang 《Journal of Soils and Sediments》2017,17(1):23-34
Purpose
Anthropogenic-induced greenhouse gas (GHG) emission rates derived from the soil are influenced by long-term nitrogen (N) deposition and N fertilization. However, our understanding of the interplay between increased N load and GHG emissions among soil aggregates is incomplete.Materials and methods
Here, we conducted an incubation experiment to explore the effects of soil aggregate size and N addition on GHG emissions. The soil aggregate samples (0–10 cm) were collected from two 6-year N addition experiment sites with different vegetation types (mixed Korean pine forest vs. broad-leaved forest) in Northeast China. Carbon dioxide (CO2), nitrous oxide (N2O), and methane (CH4) production were quantified from the soil samples in the laboratory using gas chromatography with 24-h intervals during the incubation (at 20 °C for 168 h with 80 % field water capacity).Results and discussion
The results showed that the GHG emission/uptake rates were significantly higher in the micro-aggregates than in the macro-aggregates due to the higher concentration of soil bio-chemical properties (DOC, MBC, NO3 ?, NH4 +, SOC and TN) in smaller aggregates. For the N addition treatments, the emission/uptake rates of GHG decreased after N addition across aggregate sizes especially in mixed Korean pine forest where CO2 emission was decreased about 30 %. Similar patterns in GHG emission/uptake rates expressed by per soil organic matter basis were observed in response to N addition treatments, indicating that N addition might decrease the decomposability of SOM in mixed Korean pine forest. The global warming potential (GWP) which was mainly contributed by CO2 emission (>98 %) decreased in mixed Korean pine forest after N addition but no changes in broad-leaved forest.Conclusions
These findings suggest that soil aggregate size is an important factor controlling GHG emissions through mediating the content of substrate resources in temperate forest ecosystems. The inhibitory effect of N addition on the GHG emission/uptake rates depends on the forest type.955.
Purpose
Plant residues are one of the main sources of soil organic matter in paddy fields, and elucidation of the bacterial communities decomposing plant residues was important to understand their function and roles, as the microbial decomposition of plant residues is linked to soil fertility. We conducted a DNA stable isotope probing (SIP) experiment to elucidate the bacterial community assimilating 13-carbon (13C) derived from plant residue under an anoxic soil condition. In addition, we compared the bacterial community with that under the oxic soil condition, which was elucidated in our previous study (Lee et al. in Soil Biol Biochem 43:814–822, 2011).Materials and methods
We used the 13C-labeled dried rice callus cells as a model of rice plant residue. A paddy field soil was incubated with unlabeled and 13C-labeled callus cells. DNA extracted from the soils was subjected to buoyant density gradient centrifugation to fractionate 13C-enriched DNA. Then, polymerase chain reaction (PCR) and denaturing gradient gel electrophoresis (DGGE) analysis of bacterial 16S rDNA band patterns and band sequencing method were used to evaluate bacterial community.Results and discussion
DGGE analysis showed that the band patterns in the 13C-enriched fractions were distinctly changed over time, while the changes in the community structure before fractionation were minor. Sequencing of the 13C-labeled DGGE bands revealed that Clostridia were a major group in the bacterial communities incorporating the callus-derived carbon although Gram-negative bacteria, and Actinobacteria also participated in the carbon flow from the callus under the anoxic condition. The proportion of Gram-negative bacteria and Actinobacteria increased on 14 days after the onset of incubation, suggesting that the callus was decomposed by diverse bacterial members on this phase. When the bacterial groups incorporating the 13C were compared between under anoxic and oxic soil conditions, the composition was largely different under the two opposite conditions. However, some members of Gram-negative bacteria were commonly found under the anoxic and oxic soil conditions.Conclusions
The majority of bacterial members assimilating the callus carbon was Clostridia in the soil under anoxic conditions. However, several Gram-negative bacterial members, such as Acidobacteria, Bacteroidetes, and Proteobacteria, also participated in the decomposition of callus under anoxic soil conditions. Our study showed that carbon flow into the diverse bacterial members during the callus decomposition and the distinctiveness of the bacterial communities was formed under the anoxic and oxic soil conditions.956.
Recent reports have shown that some of the immunological aspects of Q fever, a rickettsiosis caused by Coxiella burnetii, could be related to self-antigen responses. The aim of this study was to determine the specificity of the autoantibody response of patients with acute and chronic Coxiella infections. Smooth muscle and cardiac muscle-specific autoantibodies were observed in significant percentages in acutely or chronically affected Q fever patients when compared to healthy volunteers. Moreover, the incidence of cardiac muscle-specific autoantibody was significantly higher among chronically ill patients compared to acutely ill patients. Moreover, a band of 50 kD of a HeLa extract was detected in most of the sera of individuals with chronic infections and previous sequence analysis suggests that this antigen presents a high degree of homology with the human actin elongation factor 1 alpha. Further research would be necessary to confirm if antibodies to human cytoskeletal proteins could be of clinical importance in chronically infected Q fever patients. 相似文献
957.
David White Weidong Chen 《European journal of plant pathology / European Foundation for Plant Pathology》2007,119(1):3-12
Ascochyta blight is a serious disease of cool-season grain legumes (chickpea, faba bean, lentil and pea) caused by fungal
species of the anamorphic genus Ascochyta and related genera. Despite extensive studies on the biology, ecology, epidemiology
and management of the disease, little is known about the pathogenic determinants of these pathogens. This research aims at
using Ascochyta rabiei as a model for the genus in investigating genetic factors of pathogenicity, with the ultimate goal of elucidating pathogenic
mechanisms. Three advances were made: (1) insertional mutants with altered pathogenicity were identified through in vivo screening,
and genomic regions adjacent to the insertion sites in selected mutants were determined; (2) a phage library of A. rabiei genomic DNA was constructed, and the library was estimated to provide complete coverage of the A. rabiei genome. This library was used successfully to recover clones with DNA adjacent to insertional mutation sites and to isolate
specific genes; (3) DNA probes specific for an acyl-CoA ligase (cps1) and a polyketide synthase gene (pks1) were developed and library clones containing the corresponding genomic regions were identified from the phage library.
These advances provide the foundation and necessary tools for experimentation of ectopic complementation assays and targeted
mutagenesis to elucidate the genetic mechanisms of pathogenicity of A. rabiei. 相似文献
958.
Effects of water table management on soil salinity and alfalfa yield in a semi-arid climate 总被引:2,自引:0,他引:2
Hamideh Noory Abdol-Majid Liaghat Mohamad Reza Chaichi Masoud Parsinejad 《Irrigation Science》2009,27(5):401-407
A lysimeter experiment was conducted to investigate the effect of water table management (WTM) on distribution of soil salinity
and annual alfalfa (Medicago scutellata) yield. Subirrigations with three levels of water table namely, 0.5 (WT0.5), 0.7 (WT0.7), and 1.0 m (WT1.0) and a free drainage
(FD) conventional irrigation treatment were selected for this study. All treatments were arranged in a complete randomized
block design with three replicates. The results of this study indicated that the average soil electrical conductivity of the
saturated extract (ECe) in the root zone gradually increased and exceeded the designated crop threshold value (4 dS/m) after
the first forage harvest in subirrigated lysimeters. A higher salt accumulation was observed at the WT0.5 treatment. The average
dry matter yield of annual alfalfa in WT0.5 and WT0.7 treatments was found to be 52 and 73% higher compared with the control
treatment, respectively. 相似文献
959.
A cost-effective method for producing and using recombinant growth hormone (GH) has been developed. A cell-surface protein
display system was constructed to produce recombinant Japanese flounder growth hormone (r-JfGH) in yeast Saccharomyces cerevisiae and the biological activity of expressed r-JfGH was evaluated by oral delivery to juvenile Japanese flounder. The expression
vector pYD-E2, containing the JfGH gene, S. cerevisiae GAL1 promoter, and the S.cerevisiae URA3 gene downstream and upstream sequences, was designed and constructed to integrate the GH gene into the yeast genome
and secrete r-JfGH stably on the surface of the yeast cell. Expression of r-JfGH was confirmed by flow cytometry until the
50th continuous generation of transgenic yeast strain y-E2, and over 0.98 μg r-JfGH per 1 mg total protein of y-E2 was estimated
by an ELISA–RA assay. Growth of Japanese flounder was promoted significantly by the direct supplementation of freeze-dried
transgenic yeast into the Japanese flounder juvenile feed at levels of 0.5 and 1%. The weight-specific growth rate and feed
conversion ratio of the treated groups were 23.07 and 21.57% (0.5% feeding level) and 28.85 and 41.18% (1% feeding level),
respectively, higher than that of the control group in a 7-week bioactivity study. 相似文献
960.
Md. Abdul Kader Shunsuke Koshio Manabu Ishikawa Saichiro Yokoyama Mahbuba Bulbul Yuki Honda Roger Edward Mamauag Asda Laining 《Fisheries Science》2011,77(1):119-128
A feeding trial was conducted to evaluate the effect of fermented soybean meal and scallop by-product blend (3:2) (FP) on
the performance of juvenile red sea bream. Five isocaloric diets were prepared by replacing 0% (FP0), 15% (FP15), 30% (FP30),
45% (FP45), and 60% (FP60) fishmeal (FM) protein with FP, respectively. Triplicate groups of fish (initial mean weight 2.83 g)
were fed the test diets for 45 days in a flowthrough seawater system. The results demonstrated that growth rates of fish fed
FP0, FP15, and FP30 were similar, and significantly higher (P < 0.05) than those of FP45 and FP60. Nutrient utilization was significantly lower in FP60, with no differences found among
the other groups. Dietary heavy-metal contents were affected by inclusion of FP, impacting on whole-body heavy-metal contents.
In terms of oxidative stress, fish fed the FP30 diet were in the best condition, since this fish group showed the least oxidative-stressed
condition as well as the highest tolerance against oxidation. In conclusion, the approach of utilizing this fermented mixture
is promising and it could replace at least 30% FM protein in red sea bream diet without negative effects on performance, body
composition or health of fish. 相似文献